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LOCUS XM_711661 1446 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_711661 VERSION XM_711661.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1446) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1446) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1446) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1446) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1446) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1446) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1446 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1446 /locus_tag="CAALFM_C601370WA" /db_xref="GeneID:3641607" CDS 1..1446 /locus_tag="CAALFM_C601370WA" /note="Ortholog(s) have mannosyltransferase activity and role in ER-associated ubiquitin-dependent protein catabolic process, GPI anchor biosynthetic process, protein processing" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_716754.1" /db_xref="CGD:CAL0000174087" /db_xref="GeneID:3641607" /translation="MRQRTTIYNPYSSHDGIITNLNRTNFQLSSIPNHLFTIENKYTI TTTTTQPNKSSLYSAIKELRIQTKFNNNESGIPIFSFHYEPGLNIYAVPQSNVDKLEF WQQVEQLIMELLGIKLSSQQWIANVNSFYYHDIQPQPLLNLKEGWKFNLHPKSNYDYI YNQDKIIIRELLTNVSEIEFNLESGIYKEIGLFLIDEKISTNDDLNLSGIRVILDEDS NTNNKEESIHKTMFHIKPRHRSFDDSTTITTTKIIPQGLHPILSTELNTTTIVIPTDF DVEECKFYYYLNLNKSLIFDQFQNIPIGSQLIINNGNKNLELPEYKINQWGNELLFEF EFDNDNDIPHHINLTVHSRYQLPQNNHSHSQISNVLNSLPNIFIGCNVKEGNLLDKSP FDTKRDVKIGGNYEIYFTEDTVFYHLQNSDNSGNSGSSTLLEINIPHGKTTFDRVNNI TSLGLLIGVLMILYAISIRVFMSTTSKTKRD" misc_feature 760..1407 /locus_tag="CAALFM_C601370WA" /note="PIG-X / PBN1; Region: PIG-X; smart00780" /db_xref="CDD:197872" ORIGIN 1 atgagacaaa gaacaaccat ttataatcct tattctagtc atgatggaat cataactaat 61 cttaatcgaa caaatttcca attatcaagc atacctaatc atttattcac aattgagaat 121 aaatatacca tcaccaccac caccacacaa cctaacaaat catcattata tctggcaatt 181 aaagaattaa gaattcaaac gaaattcaat aataatgaat caggtatacc aattttttca 241 tttcattatg aaccaggact taatatttat gctgtaccac aatctaatgt cgacaaatta 301 gaattttggc aacaagttga acaattgata atggaattat tagggattaa attatcttca 361 caacaatgga ttgctaatgt taattctttt tattatcatg atattcaacc tcaaccatta 421 ttgaatttga aagaaggatg gaaattcaat ttacatccta aatccaatta tgattatata 481 tataatcaag ataaaattat tattcgggaa ttgttaacaa atgtgtcaga aatagaattt 541 aatcttgaac tgggtattta taaagaaatt ggtttgtttt taattgatga aaaaatctca 601 actaatgatg atttgaattt aagtggtatt agagtgatat tagatgaaga tagtaatact 661 aataacaaag aagaatcgat acataagaca atgtttcata taaaaccaag acataggagt 721 tttgatgatt ctaccaccat caccaccacc aagatcattc cacaaggatt acatcctatt 781 ttgagtactg aacttaacac aacaactatt gttattccaa ctgattttga tgttgaagaa 841 tgtaaatttt attattattt gaatttaaat aaatcattaa tatttgatca atttcaaaac 901 attccaatag gatcgcaatt aattattaat aatgggaata aaaatttaga attaccagaa 961 tataaaatta atcaatgggg taatgaactt ttatttgaat ttgaatttga taatgataat 1021 gatatccctc atcatataaa tttaacagtt cattcaagat atcaattacc tcaaaataat 1081 cattcccatt cccaaattag taatgtttta aattcgttac caaatatttt tataggttgt 1141 aatgtcaaag aaggaaattt attagataaa tcaccttttg atactaaaag agatgttaaa 1201 attggtggta attatgaaat ttattttact gaagatacag ttttttatca tttacagaat 1261 tccgacaatt ccggcaattc cggtagttca acattattag aaattaatat tcctcatggg 1321 aaaactacat ttgatagagt caataatata acttcacttg gtttattaat tggtgtattg 1381 atgattttat atgccatttc aataagagtt ttcatgagta ccacttcaaa gacgaaaagg 1441 gattaa