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LOCUS XM_711659 1188 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_711659 VERSION XM_711659.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1188) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1188) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1188) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1188) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1188) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1188) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_711659.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1188 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1188 /gene="HOC1" /locus_tag="CAALFM_C601390WA" /db_xref="GeneID:3641605" CDS 1..1188 /gene="HOC1" /locus_tag="CAALFM_C601390WA" /note="Protein with similarity to mannosyltransferases; similar to S. cerevisiae Hoc1p and C. albicans Och1p" /codon_start=1 /transl_table=12 /product="alpha-1,6-mannosyltransferase" /protein_id="XP_716752.2" /db_xref="CGD:CAL0000179200" /db_xref="GeneID:3641605" /translation="MTKYTTTASRRTGFRRHIPIILIIIILGLLVTFFFGFSSFKGAK DIQEVISNLPNDKILGLSNILSTENSKNQGELLIKIEKLHNKYYKDQEERLKKIEKQN NEILQEIKLLKSPPQHASIREKLTFVYPYDADVRFPAYIWQTWKHGLNDEKFDEKYRE GERQWAYKNPGFVHELFNDDTAHTMIKYLYRQIPEVINAFEALPEVILRMDFFRYLIL FAKGGVYADIDTFPIQPIPNWIPENVSPLDIGLIVGVESDSNSPNWRSESVRRLQLGQ FVLQSKPGHPILREIIAQIVLYTKKLEVPELNGNPNAKAIAIMKWTGSGRFTDVVFQY LNDYILSSIYESINWQHLHNLEVPKLLGDVLVLPRVSFSADDEKNPLSFVKHYGDKIY KQV" misc_feature 412..876 /gene="HOC1" /locus_tag="CAALFM_C601390WA" /note="Mannosyltransferase OCH1 or related enzyme [Cell wall/membrane/envelope biogenesis]; Region: OCH1; COG3774" /db_xref="CDD:442988" ORIGIN 1 atgacaaaat atacaactac agcgtcaagg aggacagggt tccgaagaca tattccaatc 61 attttaatta ttattatcct tggattactt gtgacatttt tttttggatt ttcatcattt 121 aaaggagcta aagatattca agaagtcatt tcaaatttac ctaatgataa aatattagga 181 ttatcgaata ttttaagtac agaaaatagt aaaaatcaag gtgaattatt gattaaaatt 241 gaaaaattac ataataaata ttataaagat caagaagaac gattaaaaaa aattgaaaaa 301 caaaataatg aaattttaca agaaataaaa ttattaaaat ctccaccaca acatgctagt 361 attcgagaaa aattaacttt tgtttatcct tatgatgctg atgttagatt cccagcttat 421 atatggcaaa cttggaaaca tggattaaat gatgaaaaat ttgatgaaaa atatcgtgaa 481 ggtgaaagac aatgggctta taaaaaccca ggatttgttc atgaattatt taatgatgat 541 accgctcata ctatgatcaa atatttatat agacaaatac ctgaagttat taatgctttt 601 gaagcattac ctgaagtcat tttaagaatg gattttttca gatatttaat attatttgct 661 aaaggtggag tttatgctga tattgatact ttccccatac aacccattcc aaattggatc 721 cccgaaaatg ttagtccctt ggatattgga ttaattgttg gtgttgaaag tgattctaat 781 tcaccaaatt ggagatcaga atcagtgaga agattacaat tgggtcaatt tgtcttgcaa 841 tctaaacctg gtcatcctat tttaagagaa ataattgctc aaattgtatt atacactaaa 901 aaattggaag ttccagaatt aaatggtaat ccaaatgcta aggcaatagc aattatgaaa 961 tggactggtt ctggtagatt tactgatgtt gttttccaat atttaaatga ttatatatta 1021 tcatctattt atgaatcaat aaattggcaa catttacata atttggaagt tccaaaatta 1081 ttaggtgatg ttttggtatt acctcgtgtt tcattttctg ctgatgatga aaaaaatcca 1141 ttatcatttg ttaaacatta cggtgataaa atttataaac aagtgtaa