Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

Candida albicans SC5314 Frp6p (FRP6), partial mRNA.


LOCUS       XM_711655                792 bp    mRNA    linear   PLN 18-APR-2022
ACCESSION   XM_711655
VERSION     XM_711655.1
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 792)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 792)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 792)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 792)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 792)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 792)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>792
                     /gene="FRP6"
                     /locus_tag="CAALFM_C601430CA"
                     /db_xref="GeneID:3641601"
     CDS             1..792
                     /gene="FRP6"
                     /locus_tag="CAALFM_C601430CA"
                     /note="Putative ammonia transport protein; regulated by
                     Nrg1 and Tup1; regulated by Ssn6; induced by human
                     neutrophils"
                     /codon_start=1
                     /transl_table=12
                     /product="Frp6p"
                     /protein_id="XP_716748.1"
                     /db_xref="CGD:CAL0000190637"
                     /db_xref="GeneID:3641601"
                     /translation="MSVSSEPSNDKSQYSPQGIGSDPVKTISYAGDGDEYIILNNKKY
                     YRHELMTAFLGTFNPGYAPYPKHEFGNASALGLASFALSAFVLGLYYAGAKGISTPNV
                     IVSLAVFYGGLAEFLAGVWEFFNGNTFAFTVFCSYGSFWITFGCMNVPSFGILSAYED
                     PVMLGNALGFFLIAWGIFTFLMLLLTFKATVVFVLLFATLDVGFFTLAAANMTGNATC
                     TQVGGIFVVISSICGWYGMISGMADKFNSYFTVHPLPVPQFGKKN"
     misc_feature    157..771
                     /gene="FRP6"
                     /locus_tag="CAALFM_C601430CA"
                     /note="GPR1/FUN34/yaaH family; Region: Gpr1_Fun34_YaaH;
                     pfam01184"
                     /db_xref="CDD:426106"
ORIGIN      
        1 atgtcagtta gttcagaacc atcaaacgat aaatcacaat attcacctca aggcattgga
       61 tcagatcccg taaaaactat atcatacgct ggtgacggag atgaatatat tatattaaac
      121 aataaaaaat attatcgtca tgaattaatg actgccttct tgggtacatt taatcctggt
      181 tatgccccat atccaaaaca tgaatttggt aatgcttcag cacttggatt agcaagtttt
      241 gctctttcag catttgtttt aggattatat tatgctggtg ctaaagggat atctacacct
      301 aatgtcattg tttcccttgc tgtattttat ggtgggttag cggaattctt agctggtgta
      361 tgggaatttt tcaatgggaa tacgtttgct tttacggtgt tttgtagtta tggttcattt
      421 tggattacgt ttggatgtat gaatgttcca tcatttggta tactttcagc ttatgaagat
      481 cctgtcatgt taggtaatgc tcttggattt tttttgattg cttggggtat atttacattt
      541 ttgatgttat tattaacttt taaagctacc gtggtgtttg ttttgttatt tgccacttta
      601 gatgtcgggt tcttcacttt ggcagcagca aatatgactg gtaatgccac ttgtactcaa
      661 gttggtggta tctttgttgt tattagttct atctgtggat ggtacggtat gatttctggt
      721 atggcagata aattcaattc ttatttcaca gttcatccac ttccagtccc tcaatttgga
      781 aagaaaaatt ga