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LOCUS XM_711635 1893 bp mRNA linear PLN 18-APR-2022 (oxaloacetate-decarboxylating) (MAE1), partial mRNA. ACCESSION XM_711635 VERSION XM_711635.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1893) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1893) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1893) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1893) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1893) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1893) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_711635.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1893 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1893 /gene="MAE1" /locus_tag="CAALFM_C601670WA" /db_xref="GeneID:3641615" CDS 1..1893 /gene="MAE1" /locus_tag="CAALFM_C601670WA" /note="Malic enzyme, mitochondrial; transcription regulated by Mig1, Tup1; colony morphology-related gene regulation by Ssn6; Hap43-repressed; Spider biofilm repressed" /codon_start=1 /transl_table=12 /product="malate dehydrogenase (oxaloacetate-decarboxylating)" /protein_id="XP_716728.1" /db_xref="CGD:CAL0000197087" /db_xref="GeneID:3641615" /translation="MLKVARLQIRFNSSTAASAAAVAAKTAEVRTRTVKTPVGIKAAI ESLKPKATRLSMDGPVECALSGFSLLNSPQFNKGSAFSKEERESFDLTGLLPSQVNSL DEQVERAYRQFSYLKTPLAKNDFCTSMRLQNKVLYYELVRRHIREMLPIIYTPTEGDA IASYSDRFRKPEGCFLDINDPDGIDKRLSAYGEDKDIDYIVVSDGEGILGIGDQGVGA IRIAIAKLGLMTLCGGIHPARVLPIALDVGTNNDRLLNDELYMGNKFPRVRDEKYWDF VDKVIQAIKKRFPSSVLHYEDFGVSTGRDLLYKYREELPSFNDDIQGTGAVVMASITA ALKFSKRDLKDIQVLVYGAGSAGLGIADQITNHLVSHGATEEQARARIHCMDRYGLIT NESTNASPAQLKYADPASEWDGVDTKSLLACVNKIKPTVLVGCSTQPGAFTEEIVREM YKHNPQPIIFPLSNPTRLHEAVPSDLMKWTDNNALIATGSPFEPVDGYYISENNNCFT FPGIGLGAVLSRCTTISDTMISAAVDRLASMSPKMENPKNGLLPRLEEIDEVSAHVAT AVILQSLKEGTARVESEEKPDGGFVEVPRDYEGCLKWVQSQMWKPVYRPYVKVEYVSE IHTYQY" misc_feature 166..1857 /gene="MAE1" /locus_tag="CAALFM_C601670WA" /note="oxaloacetate-decarboxylating malate dehydrogenase; Region: PRK13529" /db_xref="CDD:237414" ORIGIN 1 atgttaaagg ttgccagact ccagatccga tttaattcaa gcacagccgc ctcagcagca 61 gcagtagcag caaagaccgc tgaagtgcgt actcgtactg tcaaaacccc agttggtatt 121 aaagccgcaa ttgaatcatt aaaaccaaag gccacgagat tgtcaatgga tggtccagtt 181 gagtgtgcac tttctgggtt ttccttgttg aattcaccac aattcaataa aggatcagca 241 ttttccaaag aagaaagaga aagttttgat ttaactggac ttttaccttc acaagtcaat 301 tctttagatg aacaagtgga aagagcatat cgacaatttt cctatttgaa aactccctta 361 gccaagaatg atttttgtac atctatgaga ttacaaaata aagtgttgta ttatgaattg 421 gtgagacgtc atattagaga aatgttacca atcatttata ctcctactga aggtgacgca 481 attgctagtt attccgacag attcagaaaa ccagaaggtt gtttcttgga cattaatgat 541 cctgacggca ttgataaacg tttgtctgca tatggagaag ataaagatat tgattatatt 601 gttgtttccg atggtgaagg tattttgggt attggtgatc aaggtgtagg tgccattaga 661 attgctatag ccaaattggg tcttatgact ttatgtggag gtattcatcc tgcaagagtt 721 ttaccaattg ctttagatgt tggtacaaac aatgacagat tactaaatga tgaattatac 781 atgggtaaca aattcccaag agttagagat gaaaagtatt gggactttgt tgataaagtg 841 atccaagcaa tcaaaaaaag attccccagt tcagttttgc attatgaaga ttttggtgtg 901 tcaactggta gagacttgtt atataagtac agagaagaat tgccttcctt taacgatgat 961 attcaaggaa ccggggctgt ggttatggca tcaatcactg ctgcattgaa attttcaaaa 1021 cgtgacttga aagatattca agttttggta tatggagctg gatctgctgg tttgggtatt 1081 gctgaccaga tcaccaatca tttagtgtca catggtgcca ctgaggaaca agcaagagca 1141 agaatccatt gtatggatcg ttatggtttg ataactaacg aatccactaa tgcaagtcca 1201 gcacagctta aatatgctga tcctgcctca gaatgggacg gtgtcgatac taagagctta 1261 ttggcatgtg tcaacaagat taaaccaacg gtgttagttg gatgttctac ccagccaggt 1321 gcttttactg aagaaatcgt cagggaaatg tataagcaca acccacaacc aattattttc 1381 cctttatcca acccaaccag attacatgaa gctgttcctt ctgatttgat gaaatggaca 1441 gataacaatg cattgattgc aactggatct ccatttgaac ccgtggatgg ctattatatt 1501 tctgaaaaca acaattgttt cacattccca ggtattggat taggtgctgt tttatcgaga 1561 tgtacgacaa tttctgatac catgatttca gccgccgttg atcgattagc ttccatgtct 1621 cctaaaatgg agaatcctaa gaatggattg ttacctagat tagaagaaat tgatgaagtg 1681 agtgcccatg ttgctactgc agttatttta caatccttga aggaaggtac tgctagagtg 1741 gagagtgaag aaaaaccaga tggtggattt gttgaagtgc ctagagatta tgaaggttgt 1801 cttaaatggg tacaatcaca aatgtggaaa ccagtttata gaccatacgt taaggtggaa 1861 tacgtttccg aaattcacac ttatcagtat tag