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LOCUS XM_711631 2439 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_711631 VERSION XM_711631.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2439) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2439) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2439) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2439) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2439) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2439) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_711631.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2439 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2439 /gene="PTK2" /locus_tag="CAALFM_C601710CA" /db_xref="GeneID:3641611" CDS 1..2439 /gene="PTK2" /locus_tag="CAALFM_C601710CA" /note="Putative protein kinase of polyamine import; mutation confers hypersensitivity to high concentrations of tunicamycin; YPD flow model biofilm induced; rat catheter and Spider biofilm induced" /codon_start=1 /transl_table=12 /product="protein kinase" /protein_id="XP_716724.1" /db_xref="CGD:CAL0000186778" /db_xref="GeneID:3641611" /translation="MTKEHSIRNIFKKDKTPDNGSATATPSSSHTGLSKLFHKESKPI TPPMKRTPSVSSLKRRNTNPSQTSGISLNHNHHHHQDSQNHNDATTSGGNIHSSTPVN RSRSNSDRSGHVPPTGRKVLSKAETFTHLQQLDTRNAAKNQLRNHRIPSNHLSSPLSA APHSDKIVYNPYGLNKTATQERPKNTSFYLSGVNDGERVLSNPVASPNDYLPAELQQQ HVNLLEDFEIDVGTKKLGDGGSSDVRIINSCHHKKDLYALKKFTLLSKETDEDFYKRV SEEYKIHRKAAISRHVVDAFAILRIQSQSNLTRGWGMVMEFCGGGDLFSVIVKPGWKS TPLAEKYCLFKQIAYGVKFLHDHDIVHRDLKPENVLLDANGLAKLCDFGVSEFGHEVP EDFSSPVKLSTAYVGSPPYAPPEVMLLKEKSSTEIKAFAYDPFKMDCWGLGMLLFCLV YGGVPFQQSSPNDHAFRDYKFSHKRFCTDHHTFKSNQGYPRGPGSEFKLAAKFENNGA SRVAWKLCDPSENTRYTMDMLFDDPWFQSVEMCIYESPDQEVNPFVLPGTGENIDTHS VSGYSSVNNSQAPSRRGTFTSRPVGSGAGSGYNSHDESSNGLSSSFRSMLDLKDIPQK ITKTDEPLPSNSSVHSNDSSSARAKSKLDHPSSPGSLLSPSTPALQSIPADRVAQTTS PINASLPAVEESDIEHESESEIQGDETESSGLQVLPPIDDVVAASPSSLTHEPQEQVL DSVESCISLPPNRDQAFAGKDGEMCSLVDLKPAALKSATDLQLGADGMCNLGYKIKKH HHTEVSNVSNSSRR" misc_feature 703..1605 /gene="PTK2" /locus_tag="CAALFM_C601710CA" /note="The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases; Region: Protein Kinases, catalytic domain; cl21453" /db_xref="CDD:473864" misc_feature order(703..714,721..723,727..729,769..771,775..777, 877..879,943..954,1087..1089,1099..1104,1108..1110, 1138..1143) /gene="PTK2" /locus_tag="CAALFM_C601710CA" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270896" ORIGIN 1 atgacaaagg aacattcaat tcggaacatt tttaagaagg acaagacacc agataatgga 61 tcagcaacag caacaccatc gtcttcacac actggtttgt caaaactttt ccataaggaa 121 agcaaaccca tcaccccacc aatgaaaaga acgccgtcgg tctcatcgtt gaagcgccgc 181 aacaccaacc catcccaaac atctggcatt agtctcaatc ataatcatca ccatcatcag 241 gattctcaaa accataatga tgccaccact agtggtggca atatccattc ttcaacacct 301 gtcaatagaa gtagaagcaa ctctgatagg ctgggccacg ttccaccaac aggaagaaaa 361 gtgctctcaa aagcagaaac atttacccat ttacaacaat tggacactag aaatgcagcc 421 aaaaatcaat tgagaaacca ccgaattcca tcaaatcatt tgagctcacc gcttagtgca 481 gccccacatt cagataaaat tgtatataat ccatatggat taaataaaac tgcaacccaa 541 gaacgtccta aaaataccag tttctattta tctggggtta atgatggaga aagagtgtta 601 tcgaacccag tagccagtcc taatgactac ttaccagcgg agttgcaaca acaacatgtc 661 aatttgttag aggattttga aattgacgtt ggcaccaaga aattgggtga tggtggatct 721 tctgatgttc gtatcataaa ctcatgtcat cataaaaaag atttgtatgc attgaaaaaa 781 ttcactttgt tgtcaaaaga gacagatgag gatttctata aaagagtact ggaggagtat 841 aagattcata gaaaagctgc catctcaaga cacgtggttg atgcttttgc cattttgaga 901 attcagtcac aatctaattt aaccagaggt tggggtatgg taatggagtt ttgtggtggt 961 ggtgacttgt tttcagttat tgttaaaccc ggttggaagt ctactcccct tgcagaaaaa 1021 tattgtcttt tcaaacaaat agcttatggt gttaaatttc ttcatgacca cgatatagtg 1081 catcgtgatt tgaaaccaga gaatgtttta cttgacgcta acgggttggc caaattatgt 1141 gattttggtg tcagtgaatt tggtcacgaa gtaccggagg atttctcaag tcctgttaaa 1201 ttatcgacag catatgttgg ttctccccct tatgcaccac cagaagtcat gttattgaaa 1261 gaaaaatcaa gtacagaaat aaaagctttt gcctacgacc cattcaaaat ggattgttgg 1321 gggttgggta tgttgttgtt ctgtttggtt tatggtggtg tgccatttca acaatcaagt 1381 cccaatgacc acgccttccg cgattacaag tttagtcaca agagattttg caccgatcat 1441 catactttta aatctaatca agggtatcct agaggtcctg gtagtgaatt caaattggct 1501 gctaaatttg aaaataatgg tgcttccaga gttgcttgga aattatgtga cccttcagaa 1561 aacacccgtt atacaatgga tatgttgttt gacgaccctt ggttccaatc agtggaaatg 1621 tgtatttatg agagcccaga tcaagaagtg aatccatttg tgttgcctgg gactggtgaa 1681 aatattgata cacactcagt ctcagggtat tcatcagtca acaattcaca agcgccatct 1741 agaagaggta cattcacatc tcgtcctgtt ggaagtggtg ctgggagcgg atacaatagt 1801 catgatgaaa gtagcaatgg tctcagctca agcttcagaa gcatgctaga tttgaaggat 1861 attccacaga aaataacaaa aactgatgag ccattaccaa gtaattcatc tgtgcattcc 1921 aatgacagtt catcagcaag agcaaaatca aaactcgacc acccatcttc gccaggatct 1981 ctattatcac ctagcactcc agcattacaa tcaatcccag ctgatcgtgt ggcgcaaact 2041 acatctccaa ttaatgcaag tctaccagcc gtggaagaaa gtgacattga gcacgaatca 2101 gaatcagaaa tccaaggcga tgaaacagag agtctgggtc tacaggtttt accacccata 2161 gacgatgttg ttgcagcgtc tccttcctca ttgactcatg aaccacaaga gcaagtccta 2221 gattctgttg aatcttgtat tagcttacca ccaaatagag atcaagcatt tgctggtaaa 2281 gatggggaga tgtgttcttt agttgacttg aaaccagcag ctttgaaaag tgctacagat 2341 ttgcaattgg gtgctgatgg tatgtgcaat ttgggatata aaatcaaaaa gcatcaccat 2401 actgaagtaa gtaacgtttc taactcaagc cgcaggtaa