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LOCUS XM_711621 1482 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_711621 VERSION XM_711621.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1482) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1482) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1482) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1482) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1482) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1482) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_711621.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1482 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1482 /locus_tag="CAALFM_C601810WA" /db_xref="GeneID:3641634" CDS 1..1482 /locus_tag="CAALFM_C601810WA" /note="Protein of unknown function; transcription repressed by fluphenazine treatment" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_716714.2" /db_xref="CGD:CAL0000200062" /db_xref="GeneID:3641634" /translation="MGGIILLTVLSPIVALVGTVLGAMLVVPTLLFKPLFDITLLLTL LSPLFAVVGTIFASLVALPTLLVKPVFDITLLFKMFELDSIVLILILLYLIVRRSREN SEPAHNTIVNNSSKLLSLPDELFIEIMSLLNQLDKINLLFVNKRMNNLARVSLQRVIY VNNGGPRILIRREFNTLFYLKHTIITETQFRKLLSSDKIHNVKKVEFFSDVVSYKNLE LLSKSNVVATFEHKEGSSLTNSKGKLSANGFSILDVNDFLLKEASTSANLSIDCSGVT VFRKLSPRLILRSLKLQRIHLENLLLYHNFEPIEIKNLSLGFEEKAPSVIPIAKIFKL NKIESLELSFETKPTEVEMQQFMSQLVSLKHLSIMSQNFRFDRALNSLDPNSLESFHV IVMGRYDTFSAKIVAEILKNQSESIARLCWSNKRLNVRKRIYGLNDFERVYSVDAVAR DQDIAEIRALLSDGYPRLKNVISNESYYRVDRKGSNIDVVLIN" misc_feature 346..477 /locus_tag="CAALFM_C601810WA" /note="F-box domain found in Saccharomyces cerevisiae mitochondrial distribution and morphology protein 30 (ScMDM30) and similar proteins; Region: F-box_ScMDM30-like; cd22143" /db_xref="CDD:438915" misc_feature order(358..360,370..372,379..384,391..396,406..408, 412..417,427..435,439..441) /locus_tag="CAALFM_C601810WA" /note="putative Skp1 binding site [polypeptide binding]; other site" /db_xref="CDD:438915" ORIGIN 1 atgggaggta taatccttct tacggtgttg ctgcccattg tggcattggt gggaactgta 61 cttggagcaa tgcttgttgt tccaactttg ttattcaagc ctttatttga tataacgctt 121 ttgctcactt tattgctgcc acttttcgct gtggtaggaa ccatatttgc ttcattagta 181 gcactcccca ctttattggt caaaccagtc ttcgatataa cacttttatt caaaatgttt 241 gagttggatt ctattgtatt gatacttatt ttgttatatc taattgtcag acgctccaga 301 gaaaactccg agccggcaca taacactatt gtcaacaaca gtagtaagct attatcgctt 361 ccagatgaat tgtttattga aataatgagt ctattgaacc agctcgacaa aataaatctt 421 ttatttgtga acaagagaat gaataatttg gcacgagtaa gtttgcaaag agtgatttac 481 gttaacaatg ggggtccaag aatcttgata agaagagaat tcaatacttt gttctaccta 541 aaacatacca taattaccga gacgcaattc agaaaattac taagttcaga caagatacat 601 aacgttaaaa aggttgaatt cttcagcgat gttgtatcat ataagaattt agaacttttg 661 tcaaaaagca atgtagttgc cacttttgaa cataaagaag gaagcagctt gacaaattct 721 aaaggtaagt tatctgccaa tggcttttca atattggacg ttaatgattt tctattgaag 781 gaagcttcaa catcagctaa tctttcaata gattgcagtg gtgtaactgt gtttcgaaag 841 ctttctccaa ggttgattct aagatctttg aagttacaac gcatacactt ggaaaattta 901 cttctttatc acaactttga accgattgag atcaaaaatt tatctttagg gtttgaagaa 961 aaagccccat cagttattcc aatagcaaaa atattcaaat taaataaaat cgagtccctt 1021 gaacttagtt ttgaaacaaa accaactgaa gttgaaatgc agcaattcat gtcacaacta 1081 gtatcactaa aacatctatc cataatgtct cagaacttca gatttgatag agcactaaac 1141 tctttagatc ccaacagtct tgaatcattt catgttattg taatgggcag atatgatacc 1201 tttctggcta aaattgtagc agaaattctc aagaaccaat cagagtcaat agcaagattg 1261 tgctggtcca acaagcgatt aaatgtcaga aaaagaatat atgggttgaa tgattttgaa 1321 agagtgtaca gcgtagatgc agttgcaagg gatcaagata ttgctgaaat ccgagctttg 1381 cttagtgatg gatatcctcg tttgaaaaat gtcattctga acgagtcata ctacagagta 1441 gatagaaaag gttcaaatat agacgtagta ttgataaatt ga