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LOCUS XM_711610 1725 bp mRNA linear PLN 18-APR-2022 (CAALFM_C601890CA), partial mRNA. ACCESSION XM_711610 VERSION XM_711610.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1725) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1725) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1725) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1725) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1725) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1725) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_711610.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1725 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1725 /locus_tag="CAALFM_C601890CA" /db_xref="GeneID:3641598" CDS 1..1725 /locus_tag="CAALFM_C601890CA" /note="Putative DEAD-box helicase; Hap43-induced; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="ATP-dependent DNA/RNA helicase" /protein_id="XP_716703.2" /db_xref="CGD:CAL0000180288" /db_xref="GeneID:3641598" /translation="MSTSASSSYLDDETTWDSFNLDPRLLQAIDQLGFSNPTLIQSSA IPLALEEKRDIIAKASTGSGKTAAYCIPIVNNLLTDDSSQGIKSIILVPTRELSNQVF QFVEKLLTFSTNKINVLNLSSSYSDQVLNSLLVNKPEIIISTPAKLIQILEKNEKNID LSTVKNLTIDEVDLVLSFGYLDDLKKLESYLPVKKNLQTFLMSATVNDDLDDLKQRYC TKPAILKLNEDSANQNNLVQYYAKTTEFDKFLLAYVIFKLNLIKGKTIAFVNNIDRGY RLKLFLEQFGIRCCILNSELPINSRLHIVEEFNKNVYHLLIATDETNELNEEQDDDED GDEDTKDKGNAETKPKKSKKSKFKQDKEYGVSRGVDFRNVACVLNFDLPTSSKAYIHR IGRTARAGKAGMALSFVLPLSEFGKHKTASLASAKKDEKVLGRIVKQQSKNGFEIKPY QFDMKQVEGFRYRADDAFRAVTQTAVREARVKELKNELINSEKLKRFFEENPQDLASL RHDKELHPARIQSQLKNVPQYLLPESARQDVKNIGFVPFHKNKIHKHRKGKGKGRKKV DPLKSFRK" misc_feature 61..678 /locus_tag="CAALFM_C601890CA" /note="DEAD-box helicase domain of DEAD box protein 56; Region: DEADc_DDX56; cd17961" /db_xref="CDD:350719" misc_feature order(97..102,106..114,121..123,178..201) /locus_tag="CAALFM_C601890CA" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350719" misc_feature 706..1227 /locus_tag="CAALFM_C601890CA" /note="C-terminal helicase domain of the DEAD box helicases; Region: SF2_C_DEAD; cd18787" /db_xref="CDD:350174" misc_feature order(1102..1104,1108..1110,1183..1185,1192..1197) /locus_tag="CAALFM_C601890CA" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350174" ORIGIN 1 atgtcaacat cagcatcatc ttcatattta gatgatgaaa caacttggga ctcgtttaat 61 ttagatccac gtttattaca ggctattgat caattggggt tttctaatcc cacgttgatt 121 caaagtagtg ctatcccatt agcattagaa gaaaaaagag atattattgc taaagcctct 181 accggttcag gtaaaactgc cgcctattgt attccaatag tgaataattt gttaaccgat 241 gactcatctc aaggcataaa gagtatcata ttagtaccaa ctagagagtt gtctaatcag 301 gttttccaat ttgttgaaaa attattgaca tttagtacta acaagattaa cgtcttgaac 361 ttgtcctcca gttatagtga ccaagtttta aattcgttgt tagttaataa accagaaata 421 attatttcca cgccagcaaa attgattcaa attctagaga aaaatgaaaa gaatattgac 481 ttgagtacag tgaaaaactt gactattgat gaagttgatt tggtgttatc gtttggatat 541 ttggatgatt tgaagaaatt ggagagttat ttaccagtga aaaagaattt gcaaacattt 601 ttaatgtcag ctactgtgaa tgatgattta gatgatttga agcaaagata ctgtactaaa 661 ccagctatat tgaaattaaa tgaagactca gccaatcaaa ataatttggt tcaatattat 721 gccaaaacaa cagaatttga taagttctta ttagcatatg tgattttcaa attgaatttg 781 attaaaggta aaaccattgc ctttgtaaat aacattgata gaggatacag attgaaattg 841 tttttggaac aatttggaat tagatgctgc attttgaata gtgagttgcc cataaattcg 901 agactacaca ttgttgagga gtttaataaa aatgtttacc acttgcttat agcaacagat 961 gagacgaacg agttaaatga agagcaagat gatgatgaag atggtgatga agatactaag 1021 gataaaggca acgctgagac taaaccgaaa aaatcgaaaa agtcaaaatt caaacaagac 1081 aaagaatatg gtgtttcccg tggtgtggat ttcagaaacg tcgcttgtgt gttgaatttt 1141 gatttaccaa cctcttcaaa ggcatatatt catagaattg gaagaacggc aagagctgga 1201 aaagctggta tggcactttc atttgtgttg ccgttgtctg aatttggtaa gcataaaaca 1261 gcatctttag caagtgcaaa gaaagatgaa aaggtcttgg gccgtatagt caaacaacaa 1321 tccaaaaacg gatttgaaat caaaccttac caatttgata tgaaacaagt tgaagggttc 1381 cgttatcgtg ctgacgatgc attcagagct gtaacccaaa ctgctgtgag agaggccaga 1441 gttaaagaat tgaaaaatga gttgatcaat tcggaaaagt tgaagagatt ctttgaagaa 1501 aacccgcaag atttggcaag tttgagacat gataaagagt tgcacccagc tagaatccaa 1561 tcccaattga aaaatgttcc gcaatatctt ttacctgaaa gtgctcgaca ggatgtaaaa 1621 aatattggat ttgtcccttt ccataaaaac aagatacata agcatagaaa gggtaagggt 1681 aaaggtagga aaaaagttga tccactaaaa tcatttagaa agtag