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LOCUS XM_709250 1242 bp mRNA linear PLN 18-APR-2022 (CAALFM_C601300WA), partial mRNA. ACCESSION XM_709250 VERSION XM_709250.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1242) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1242) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1242) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1242) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1242) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1242) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1242 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1242 /locus_tag="CAALFM_C601300WA" /db_xref="GeneID:3644024" CDS 1..1242 /locus_tag="CAALFM_C601300WA" /note="Putative transferase involved in phospholipid biosynthesis; induced by alpha pheromone in SpiderM medium" /codon_start=1 /transl_table=12 /product="putative acyltransferase" /protein_id="XP_714343.1" /db_xref="CGD:CAL0000183283" /db_xref="GeneID:3644024" /translation="MNSRHSLPIVILRTAFITPLFILGCLSISLTQFLTLLIFKNNPD VKQAIINNTKNHFVILISYITTIVNPCKIEITIDETTVPNSDHFTVDESNNIHTMFQP NSVLISNHQIYTDWLYLWFLTYTSKFGNSVFIILKDLSKIPVLGYGMKNYNFLFLSRK WEKDKIVLTNQLLEIDANARGMGPANGVQLIGSSSTTNTEFTKWPQGSNVNKIWPYEL ILFAEGTVPSDRTTKKSAEFIASRGLPPLKHVLLPRIRGLFLALKKLKSSVEIVYDIT TAYSGLTEDQYGEIEYSLKRFYLKGYGPPKINYYIKGWKLKDIPLGEDVDDIDNILEQ DLKKFEDWLLKIWYEKDKLMDNHYKLGNWGELNHKTTRSIIGDFKLRNQFEIFLPFLA TIATILFLRIAYILIRRIINV" misc_feature 184..936 /locus_tag="CAALFM_C601300WA" /note="Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like; Region: LPLAT_LCLAT1-like; cd07990" /db_xref="CDD:153252" misc_feature order(328..330,337..339,343..345,406..414,670..678) /locus_tag="CAALFM_C601300WA" /note="putative acyl-acceptor binding pocket [active]" /db_xref="CDD:153252" misc_feature 910..>1095 /locus_tag="CAALFM_C601300WA" /note="Acyltransferase C-terminus; Region: Acyltransf_C; pfam16076" /db_xref="CDD:465006" ORIGIN 1 atgaattcta gacattcatt gcctatagtc attcttagaa ctgcttttat aactccattg 61 tttatattgg gatgtttaag tattagttta actcaatttt taacattatt aatattcaaa 121 aataatcctg atgttaaaca agcaattatc aataatacaa agaatcattt tgtcatttta 181 atatcttaca ttaccacaat tgtcaatcca tgtaaaatag agataactat agatgaaact 241 acagtaccca attcagatca tttcaccgtt gatgaatcaa ataatataca tacaatgttt 301 caaccaaatt ctgttttaat ttctaatcat caaatatata ctgattggtt atatttatgg 361 tttttaactt atacttcaaa atttggtaat tctgtattta taatattaaa agatttatca 421 aaaattcctg tgttgggata tggaatgaag aattataatt ttttattttt aagtagaaaa 481 tgggaaaaag ataaaattgt tttaactaat caattattgg aaattgatgc caatgcaaga 541 ggaatgggac ccgccaatgg agttcaattg ataggcagta gttctaccac aaacacagaa 601 tttactaaat ggccacaagg ttctaatgtc aacaagatat ggccatatga attgatatta 661 tttgcagaag gtacggttcc atcagatcgt actactaaga aatctgctga attcattgcg 721 tcgagaggat taccaccttt aaaacatgta ttattacctc gtattagagg attattttta 781 gcgttaaaaa aattgaaaag ttcagtagaa atagtgtatg atataactac ggcttattct 841 ggattaactg aagatcaata tggtgaaatt gaatattcat tgaaaagatt ttatttgaaa 901 ggttatggac caccaaaaat taattattat attaaaggtt ggaaattaaa agatatacca 961 ttaggtgaag atgttgatga tattgataat attctagaac aagatttaaa aaaatttgaa 1021 gattggttat taaaaatatg gtatgaaaaa gataaattaa tggataatca ttataaatta 1081 ggtaattggg gagagttaaa ccataaaaca acaaggtcta ttattggtga ttttaaatta 1141 agaaaccaat ttgaaatttt cttaccattt ttagctacca ttgctactat tttattctta 1201 agaattgctt atattttaat tagacgaatt attaatgtat ag