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LOCUS XM_709245 1782 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_709245 VERSION XM_709245.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1782) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1782) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1782) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1782) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1782) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1782) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_709245.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1782 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1782 /locus_tag="CAALFM_C601220CA" /db_xref="GeneID:3644042" CDS 1..1782 /locus_tag="CAALFM_C601220CA" /note="Ortholog(s) have role in histone deacetylation, negative regulation of chromatin silencing at telomere, negative regulation of meiotic nuclear division, positive regulation of stress-activated MAPK cascade" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_714338.2" /db_xref="CGD:CAL0000187685" /db_xref="GeneID:3644042" /translation="MSLTSKELNYLIWRYLQESGYDLSAYALDQQSQCSEYENNPTTQ ELIQKIKPGCLVDLIQKGILYMAAEQEATDSTTNLSLYGALIQDDLNNLKDNNNISNG SNGSRFALKSEIETNGEQKDSEKQTNNDKDNQDIEMTDALNKEVQQQEIIEFETQLLS PQLKFAPSLTCDWHPTTEVFAYGKDDGTATINAIQDGKIIETRTLTHPNLLNIKNQIN IVSWSPQGSLIITCGANSELRAWSPDGKLKNIASTIVDEAISLENTKLISIISSLSWS PTGKFLLSIDSSNQVCIWDGTTISLIKQIKNLEINDDSVVCSCWLSEDKFAVTTNTNG IKIYDILQPPSSHFGNQLDVQPIGLLNGHEHNISLMKLNPVTKLLATCSDFDYSIKVW SSSSSQECLDLNINPEKKYTLKLHAAPMIGLIWLPDSNSNERSLLLSVSMEGILNIWD AKTSENIKSSELFNNKDNFTNELKDDDNNNDNNNNDTTIKDVLVFNAVLSPDGKYLAL GDDYCRVTIWDVDTTHYLNEPKDLIRCKAVYKPEISAEDKLKATIGICDMKWDHESKX NMCFLQWYGKCYNQHNIKXPKKKKKSL" misc_feature 19..84 /locus_tag="CAALFM_C601220CA" /note="Region: LisH; pfam08513" /db_xref="CDD:462501" misc_feature 466..1566 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 505..636 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 649..753 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 775..927 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 946..1083 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1105..1242 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1258..1347 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1480..1560 /locus_tag="CAALFM_C601220CA" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" ORIGIN 1 atgtcactaa ctagtaaaga actaaattat ttaatatgga gatatcttca agaatcagga 61 tatgatttat ctgcctatgc attagaccaa caatcacaat gttctgaata tgaaaacaat 121 cccactactc aagaacttat acagaaaata aaacctggat gtcttgttga tttaattcaa 181 aaagggatat tatatatggc tgcagaacaa gaggccactg attctactac aaatttatca 241 ttatatggag cattaataca agacgatttg aacaatttaa aggacaataa taatattagc 301 aatggaagta atggttcgag gtttgcattg aaatcagaga tagaaacaaa tggggaacaa 361 aaagattcag aaaaacaaac caataatgat aaagataacc aagatataga aatgaccgat 421 gcattgaaca aagaggtaca acaacaggaa ataattgaat ttgaaacgca attactttca 481 ccacagctta aatttgctcc aagtttgaca tgtgactggc atccaacaac tgaagtgttt 541 gcttatggca aagatgatgg tactgccaca ataaatgcta ttcaagatgg caaaataatt 601 gaaacaagaa ctttaaccca tccaaatctt ttgaatatta aaaaccaaat caacattgta 661 tcatggtcac ctcaaggtag tttaattata acatgtggag caaatagtga attaagagct 721 tggtcaccgg atgggaaatt gaaaaacatt gccagtacta ttgttgatga agcaatttca 781 ttggaaaaca ctaaattaat cagtataatc tcatcattgt catggagccc aacagggaaa 841 tttttattgt caatagatag cctgaatcaa gtatgtattt gggatggcac aacaatatct 901 ctaataaaac aaatcaaaaa tttggaaatt aatgatgatt cagtggtttg ttcttgttgg 961 ttgagtgaag ataaatttgc tgtcactact aataccaatg gcattaaaat ttatgatata 1021 ttacaacctc catcatctca ttttgggaat caattagatg tgcaacctat aggtttattg 1081 aatggacacg aacacaatat ttcactcatg aaattaaacc ctgtgacaaa attattagcc 1141 acatgttctg atttcgatta ttcgataaaa gtatggagta gttcttcttc tcaagaatgt 1201 ttggatttga atattaatcc tgaaaaaaaa tacactttga aattacatgc agcaccaatg 1261 attggattaa tctggctacc tgattccaat tcaaatgaac gtagtttatt attaagtgtt 1321 tccatggaag gtattctaaa tatttgggat gctaaaactt cggaaaacat caaaagttct 1381 gaattgttta ataataaaga taactttacc aatgaattga aagacgacga caacaacaac 1441 gacaacaaca acaatgacac cactattaaa gatgttttgg tattcaatgc agtattgtca 1501 cctgatggga aataccttgc cttgggggat gattattgtc gagtaacaat atgggatgtt 1561 gacacaactc attatctaaa tgaaccaaaa gatcttatca gatgcaaagc agtttataaa 1621 ccagaaatat ccgctgaaga caaattaaag gcaactatag ggatttgcga tatgaaatgg 1681 gatcatgaat ctaaawttaa tatgtgtttc ctacaatggt atggaaagtg ttataatcaa 1741 cacaacataa agaamccmaa aaaaaaaaag aaatctttgt aa