Candida albicans SC5314 Sec9p (SEC9), partial mRNA.

LOCUS       XM_709230               1593 bp    mRNA    linear   PLN 18-APR-2022
ACCESSION   XM_709230
VERSION     XM_709230.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 1593)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 1593)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 1593)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 1593)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            On Dec 8, 2016 this sequence version replaced XM_709230.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>1593
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /db_xref="GeneID:3644052"
     CDS             1..1593
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /note="t-SNARE protein required for secretory
                     vesicle-membrane fusion"
                     /codon_start=1
                     /transl_table=12
                     /product="Sec9p"
                     /protein_id="XP_714323.2"
                     /db_xref="CGD:CAL0000200439"
                     /db_xref="GeneID:3644052"
                     /translation="MGIKKMFQKKEPTEQEIREELSRVGISTRSNNTRQEKFGAFKNY
                     AQERANMKPQLGPVGGNPYANINPGTNNNNNNPYANDNGNNSTGNPNNNSNSNNGGNP
                     YGGGVTNNNPYGGSGGNGRGSSPSPYAPTTSTTTRSSNPYGNNNGSRSSQNTSSPYAK
                     STNNSSYSNSPYSGSTVNNGNRGGHSNNSNSSAGGNPYAAGGRSSQSQNSRDNVYTAP
                     ATRTSTRQTQGYGGGDTDSTLDLNAIPSHQMFDNKKPIKRNQQSSQQPANDYNLDLND
                     EYGEEEDLNLDISEVPEEQQQINSEDEEVEAIKQDIKFVKQESVQSTRNTLRMAQEAD
                     ASGTNTLGMLGSQSERLYNAEQNLLLAETQTQIADEKVKELKRLNRSIFIPANGNPFN
                     KKSRLRQQEEKIKNQKLQEKYIRENNRQEMFASEQRIKQGITNNSTNNDVYNKYQDEK
                     NLSAAKRYQFENDSEDDDMEKEIASNLNQIDQYAKKLKGLANTMGTEVDNQNTRLKKI
                     EESADKLDINVHMNTTRLNNIR"
     misc_feature    928..1137
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /note="N-terminal SNARE motif of SEC9; Region:
                     SNARE_SEC9N; cd15886"
                     /db_xref="CDD:277239"
     misc_feature    order(934..936,943..960,964..981,985..990,997..1002,
                     1006..1023,1027..1032,1036..1044,1048..1065,1069..1074,
                     1078..1086,1090..1095,1099..1107,1111..1116,1120..1128,
                     1132..1137)
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277239"
     misc_feature    1039..1041
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /note="zero layer [active]"
                     /db_xref="CDD:277239"
     misc_feature    1408..1584
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /note="C-terminal SNARE motif of SEC9; Region:
                     SNARE_SEC9C; cd15857"
                     /db_xref="CDD:277210"
     misc_feature    order(1408..1410,1414..1422,1426..1443,1447..1464,
                     1468..1476,1480..1485,1492..1497,1501..1506,1510..1518,
                     1522..1527,1531..1536,1543..1548,1552..1569,1573..1578)
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /note="heterotetramer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:277210"
     misc_feature    1501..1503
                     /gene="SEC9"
                     /locus_tag="CAALFM_C601100WA"
                     /note="zero layer; other site"
                     /db_xref="CDD:277210"
ORIGIN      
        1 atgggtatta agaaaatgtt tcaaaagaaa gaaccaaccg aacaagaaat tcgtgaagaa
       61 ttaagtcgag ttggcatttc tacaagatca aataatactc gacaagagaa gtttggtgca
      121 tttaaaaatt atgctcaaga acgagctaat atgaaaccac aattaggacc agttggtggt
      181 aatccttatg ccaatattaa tcctgggacc aacaataata ataataatcc atatgccaat
      241 gataatggga ataatagtac tggcaacccc aacaacaaca gcaacagcaa caacggtggt
      301 aacccctatg gtggtggtgt tactaataat aatccttatg gaggctctgg tggtaatgga
      361 agaggatcat cacctagtcc ttatgcaccg actacatcaa caactactag atcatctaat
      421 ccatatggaa acaataatgg ttctagatca agtcaaaaca cttctagtcc ttatgccaaa
      481 tcaactaaca attcatcata ttctaactca ccgtattctg gatcaactgt aaataatggt
      541 aatcgtggcg gccatagcaa caacagcaat agttctgctg gtggtaaccc ttatgctgcc
      601 ggtggtagaa gttcacaatc tcaaaattca cgagacaatg tatatacagc tcctgccact
      661 cgtacatcaa ctagacaaac tcaaggatat ggaggtggtg ataccgattc gactcttgac
      721 cttaatgcca ttccatcaca tcaaatgttt gataataaga aaccgatcaa aagaaatcaa
      781 caaagttcac aacaacctgc caatgattat aatttagatt taaatgatga atatggcgaa
      841 gaagaagact tgaatttgga tataagtgaa gtacctgaag aacaacaaca aatcaattct
      901 gaagatgaag aagtagaagc cattaaacaa gatattaaat ttgtcaaaca agaatcagtt
      961 caaagtacca gaaatactct tagaatggca caagaagctg atgcatcggg tactaatact
     1021 ttaggaatgt taggatcgca actggaacga ttatataatg ctgaacaaaa cttattatta
     1081 gcagaaacac aaactcaaat agctgatgaa aaagttaaag aattgaaacg attaaatcga
     1141 tcgattttca ttccagctaa tggtaatcca tttaataaga aatctcgatt acgtcaacaa
     1201 gaagaaaaaa ttaagaatca aaaattacaa gaaaaatata ttcgtgaaaa taatcgtcaa
     1261 gaaatgtttg ctagtgaaca acgtataaaa caaggaatca cgaataattc aactaataat
     1321 gatgtttata ataaatatca agatgaaaaa aatttatcag ctgctaaaag atatcaattt
     1381 gaaaatgata gtgaagatga tgatatggaa aaagaaattg ctctgaattt gaatcaaatt
     1441 gatcaatatg ctaaaaaatt gaaaggatta gctaatacta tgggtactga agttgataat
     1501 caaaatacta gattgaagaa aattgaggaa agtgctgata aattggatat taatgttcat
     1561 atgaatacta ctagattgaa taatattcgt tag