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LOCUS XM_709224 1506 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_709224 VERSION XM_709224.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1506) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1506) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1506) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1506) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1506) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1506) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1506 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1506 /locus_tag="CAALFM_C601050WA" /db_xref="GeneID:3644015" CDS 1..1506 /locus_tag="CAALFM_C601050WA" /note="Probable mitochondrial tyrosyl-tRNA synthetase, based on conservation in other fungi" /codon_start=1 /transl_table=12 /product="tyrosine--tRNA ligase" /protein_id="XP_714317.1" /db_xref="CGD:CAL0000176983" /db_xref="GeneID:3644015" /translation="MLKTHTRNIPLIRRLARFNSTIARDPVTIIPTIYELTEAKDLTP ETNPDNSLLEYLQSRHLIESITDDNLYKLTKRGSNHKFKLYCGADPTASSLHLGNLLP LMVLLHFKMSGNDVVGLVGGATGLVGDPSGRKTERNKIDEVEVEDNVTKIQRQISTFL SNGIEYAKSRQFPMTEKVGDTTSVNNASWWENVKMLEFLATYGRHIRVSSMLARDSIQ SRLESGGIGFNEFTYQILQAYDFWHLYKDENVNMQVGGNDQWGNITAGIDLISRLKKF HGKKHEAYGLTVPLLTTSSGEKFGKSAGNAVFIDSSLTTPYQMYQYFINVPDDIVGKL LKVFTLLPLNVIEGELLPKHNSDPGLRIAQRVLAREVVDLIHGVGVGDEMAFITGFLF PTPDQPFNDNVSADKLIENFKRSGILFKRNKPSPDEEIKLSALLADIVGKSKGEMRRL IKAGGVYMGLDRNQIEDPDDVILFDVDNHLIDGKLLLVRVGKQNYYVVEFV" misc_feature 148..1503 /locus_tag="CAALFM_C601050WA" /note="Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: TyrS; COG0162" /db_xref="CDD:439932" ORIGIN 1 atgttgaaaa cacataccag aaacatacct ttgattagaa ggcttgctag atttaattca 61 acaattgcaa gagatccagt cactatcatt cctaccatct atgaattgac tgaagccaaa 121 gatttaacac cagaaaccaa tcccgacaat tcattattag aatatttaca aagtcgacat 181 ttaattgaat caataaccga tgataattta tataaattga ctaaacgtgg ttctaatcac 241 aaattcaaat tatattgtgg tgctgatcct acggcatcat cactacattt aggtaattta 301 ttaccattaa tggtgttatt acatttcaaa atgagtggta atgatgttgt tggacttgtt 361 ggaggtgcta ctggacttgt tggagatcca agtgggagga aaacagagcg taacaagatt 421 gatgaagttg aagttgaaga taatgtgacg aaaatccaac gacaaatttc tacatttttg 481 agtaatggga tagaatatgc caaatcaaga caattcccca tgactgaaaa agtcggtgat 541 actacatcgg taaataatgc ttcatggtgg gaaaacgtga agatgttgga atttttggct 601 acatatggta gacatattag agttagttcg atgttagcac gtgattccat tcaatcaaga 661 ttagaactgg gtggaattgg attcaatgaa tttacctatc agattctaca agcttatgat 721 ttttggcatt tatacaagga tgaaaatgtt aatatgcaag ttggaggaaa tgatcaatgg 781 gggaatatta ctgctggtat tgatttaatt tcacgtttga agaaatttca tggcaagaaa 841 catgaagctt atggacttac tgttccatta ttgactactt ctagtggtga gaaatttggt 901 aaatccgctg gaaatgcagt atttattgat tctagtttga ccactcctta tcaaatgtat 961 caatatttca ttaatgttcc agatgatata gtgggcaaat tattaaaagt gttcacatta 1021 ttgcccttga atgtaattga aggtgaatta ttacctaaac ataacagtga tcctggttta 1081 cgtattgctc aacgtgtttt agcacgtgaa gttgttgatt tgatccatgg tgttggtgtt 1141 ggtgacgaaa tggcgtttat tacgggattt ttattcccta ctccagatca accatttaat 1201 gataatgtaa gcgctgataa attgatagaa aattttaaaa gatcaggtat tttgtttaaa 1261 agaaataagc cttcacctga tgaagaaatc aaattgagtg cattattagc tgatattgtt 1321 ggtaaatcaa agggtgaaat gagaagattg attaaagctg gtggtgtata catgggattg 1381 gacagaaatc aaattgagga tccagatgat gttatattat ttgatgttga taatcatttg 1441 attgatggta aattgttgtt ggttagagtt ggtaaacaga attattacgt tgttgagttt 1501 gtataa