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LOCUS XM_709208 2691 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_709208 VERSION XM_709208.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2691) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2691) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2691) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2691) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2691) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2691) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_709208.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2691 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2691 /locus_tag="CAALFM_C600910CA" /db_xref="GeneID:3644030" CDS 1..2691 /locus_tag="CAALFM_C600910CA" /note="Protein with a predicted thioredoxin-like domain; Hap43-repressed; induced by prostaglandins" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_714301.2" /db_xref="CGD:CAL0000184226" /db_xref="GeneID:3644030" /translation="MDIEERLEKAEQSDSPSLVGSSIRSADDSTHKNYIHPEKYKSSK DINKLKRYSKLNSAITASLDDLINEGALLGSEADFDKFLDQDGSVKTDAQYTPEKKVA SEETDDVTSTKGDEVEVLKTQKEDKKAQVAESSPQKSSSDEKSSETESSVIESEPEIS STEDTATDNVGGKTAASSFYKQEDYSTPNLSEFQLEHDIKDHKELIDHVQSYDLQKLP NSNSSFNSKFRKDEEVVSATSSQPTLLSPAQQQRLEGGLHTPFFHTERPRSRSRSANP TSTTRDRSSSRNSTGSRKPHLARGDSYKSTHEEEPSKYELPADLAQEVDEAKEEEEPD ERRSRQSKPTMGESIAAAEAKAEALGKAADPAFEADTPLTRDPSLVTTGDYTNFEVDT PKKEIPLSDNFYTARSASATNYLRSISRSRSAARNASSVVGKDEKNDSSTDALVREGA LISDDPYSTIEQLDTMVEEVLHIGDNTLTSDTKSTDTKDSEKEKFVAEPKSVDKTKEL ETKTSEKSEESKESGVEKLKEFDTEKEISVEESKKVDDNDETDLKESKETKVEKASDK PITHEELIDEDIEKAKHQSNEKDDANTDVLAEEGALVNEDDYDLVDKKELEKEGITTE EEAPLNIKEKKSEKTVQEDVLESSVKKDDEKPILDVESKEAKKAADDEEKAASEQPPS DIVEKSSKETEEKETDETTKEELPVGTKVEDSEKDTTTLKSEVEELEKSEEQPLDIKK KEVVETKDDVATEKSKDVEQAVSSTTKETTKPEVLETEKPKPAVADDDDLDDLDISPE EIRKHLESQPVYIFTSLAGGMQVILRSNNLAAILQGNGIKFEYRDLGTDEEAKKIWKR QANGKTLPGVVRGDDYIGNWQEIEDANEEYRLRELLYETL" misc_feature 1444..>1983 /locus_tag="CAALFM_C600910CA" /note="RNA polymerase sigma factor; Provisional; Region: PRK05901" /db_xref="CDD:235640" misc_feature 2425..>2676 /locus_tag="CAALFM_C600910CA" /note="The thioredoxin (TRX)-like superfamily is a large, diverse group of proteins containing a TRX fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox...; Region: Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; cl00388" /db_xref="CDD:469754" ORIGIN 1 atggacattg aagagcgttt agaaaaagca gaacaatctg attctccatc tttggttgga 61 tcttccatta gatcagccga cgattccact cacaagaatt atatccaccc agaaaaatac 121 aaatcttcca aagatatcaa caaattgaaa agatattcga aattgaattc agcaattacc 181 gcatctttgg atgatttgat caatgaaggg gctttgttag gatcagaagc tgattttgac 241 aagtttttag accaggatgg tagtgtcaag actgatgctc aatatacacc cgaaaaaaag 301 gttgctctgg aagaaaccga tgatgttaca agcactaaag gtgatgaagt tgaagttttg 361 aaaacccaga aagaggacaa gaaagcacaa gttgcagaat cttcccctca gaaatcttct 421 tctgatgaaa aatcttctga aactgaatct tcggtaattg aatcagaacc tgaaattagt 481 agtactgaag atactgctac tgataatgtt ggaggtaaaa ctgctgcctc ttccttctac 541 aaacaagaag attattcaac ccctaactta tctgaatttc aattagaaca cgatattaaa 601 gatcacaaag aattgataga ccacgtccaa tcttatgact tgcaaaaatt accaaattcc 661 aattctagtt tcaattccaa atttagaaaa gatgaagaag tggtctctgc tacatcatca 721 cagcctactt tgctttctcc agcgcagcaa caaagattag aaggtggatt acatactcct 781 ttttttcata ctgaaagacc aagatccaga tcaaggtcag ctaatccaac atctacaacc 841 agagatagat cttcctcaag aaattcaact ggttcaagga aacctcattt ggctcgtggt 901 gactcttaca agagtactca tgaagaagaa ccttctaaat atgaattacc agctgattta 961 gctcaggaag ttgatgaagc caaagaagaa gaagaaccag atgaaagacg ttcaagacaa 1021 tcgaaaccaa ctatgggtga atctattgct gctgccgaag ccaaagccga ggcattaggt 1081 aaagctgccg atccagcatt tgaagctgat accccattga ctagagatcc ttcattagta 1141 actactggtg attatactaa ttttgaagtt gatacaccaa agaaggaaat ccccttgtca 1201 gacaatttct atactgctcg ttctgcttct gccaccaatt atcttcgttc aatttctcgt 1261 tctcgttctg cagcaagaaa tgcaagttca gtagttggaa aagatgagaa gaatgattca 1321 agtactgatg cattggttag agaaggcgct ttgatcagtg atgatccata ttctactatt 1381 gaacaattgg ataccatggt agaagaggtt ttacacattg gagacaatac attaaccctg 1441 gatacaaaat caactgacac gaaagatagt gagaaggaaa agtttgtcgc agaacctaaa 1501 agtgttgaca aaacgaaaga attagaaacg aagacctcag agaaaagtga agagagtaaa 1561 gaatcgggtg ttgaaaaact aaaagagttc gataccgaaa aagaaatctc agtagaagag 1621 tccaaaaaag ttgatgacaa cgatgaaaca gatttgaaag aatcaaaaga aactaaggtc 1681 gaaaaagctt ccgataaacc aattactcat gaggaactta ttgatgaaga tatcgaaaaa 1741 gcaaaacatc aaagtaatga aaaagatgat gccaatactg atgttctagc tgaagaaggt 1801 gctttggtca atgaagacga ttatgattta gttgataaaa aagaattgga aaaagaaggt 1861 attacaactg aagaggaggc acctttgaat atcaaggaaa aaaaatccga gaaaactgtt 1921 caagaagatg ttcttgaaag tagtgtaaaa aaagatgatg aaaagccaat tttagatgtt 1981 gaatcaaaag aagctaagaa agctgcggat gacgaagaaa aagctgccag cgaacaacca 2041 cctctggata ttgtggaaaa gtcatcaaag gaaactgaag agaaagaaac agatgaaaca 2101 actaaagaag aattaccagt tggcactaaa gtagaggatt cagagaaaga tactaccact 2161 ttgaaatcag aagtagagga attggaaaaa tctgaagagc aacctttaga tattaaaaag 2221 aaagaagttg tcgaaaccaa agatgacgtc gccacagaaa aatctaaaga tgttgaacag 2281 gctgtttctt caactaccaa agaaacaaca aaacctgaag ttttggaaac tgaaaaaccg 2341 aagcccgcag ttgctgatga tgatgatttg gatgatttgg atatttcgcc agaagaaatc 2401 cgtaaacatc ttgaatcaca accagtttat attttcactt cattagccgg tggtatgcaa 2461 gtcatactta gatcaaataa tttggcggct attttacaag gtaatggaat caaatttgag 2521 tatcgtgatt tgggaactga tgaagaagct aaaaagattt ggaaaagaca agctaatggt 2581 aagactttac caggtgttgt cagaggagat gattatattg gtaattggca agaaatcgag 2641 gatgctaatg aagaatacag attgagagag ttgttatatg aaactttata g