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Candida albicans SC5314 mitochondrial 37S ribosomal protein YmS18


LOCUS       XM_708728                648 bp    mRNA    linear   PLN 18-APR-2022
            (CAALFM_C601980CA), partial mRNA.
ACCESSION   XM_708728
VERSION     XM_708728.1
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 648)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 648)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 648)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 648)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 648)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 648)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>648
                     /locus_tag="CAALFM_C601980CA"
                     /db_xref="GeneID:3644560"
     CDS             1..648
                     /locus_tag="CAALFM_C601980CA"
                     /note="Mitochondrial ribosomal protein of the small
                     subunit; S. cerevisiae ortholog is essential for
                     viability; Spider biofilm repressed"
                     /codon_start=1
                     /transl_table=12
                     /product="mitochondrial 37S ribosomal protein YmS18"
                     /protein_id="XP_713821.1"
                     /db_xref="CGD:CAL0000201449"
                     /db_xref="GeneID:3644560"
                     /translation="MFSGISKLILGKSAISSAYSIPKPFNYQTISRALSTSSTVASVQ
                     RANKNASMSQLAQKLNKNKTNEKVVYWKLYATFNRHNTRCTLVAVVEDLDFMEKNKDL
                     PYNDKVLYYLQLPHKVKYSVTAGQLGFRKSQRQEYEAGFQVSSKMFKTIEERNYIGPH
                     DKIELILKNFGKGREAFQAALLGKEGSKIKNNIVRVCDATVLKFGGDRPKKLRRL"
ORIGIN      
        1 atgttttcgg gtataagcaa gttgattttg ggaaagtccg ctatatcttc ggcgtactca
       61 attccaaaac cttttaatta ccaaaccata tcacgagcct tgtcaacatc atccacggta
      121 gcaagcgtac agagagctaa caaaaatgca tcaatgtctc aattagccca gaaattgaat
      181 aaaaacaaaa ctaacgaaaa agtagtttat tggaaactat acgctacatt taatagacac
      241 aacaccagat gcacattagt ggccgtggtt gaagacttag atttcatgga gaagaacaaa
      301 gatttaccat ataacgacaa agtgttatac tacttacagt tgcctcataa ggttaaatat
      361 agtgtaactg ctggacaatt aggattcaga aaatcccaga gacaagaata cgaagctggt
      421 ttccaagttt cgagtaaaat gtttaaaacc atagaagaaa gaaactatat tggccctcac
      481 gataagattg agttgatttt gaaaaacttt ggtaaaggaa gagaagcctt ccaagctgcc
      541 ttgttgggta aggaaggttc aaaaatcaag aacaacatcg tcagagtctg tgatgctaca
      601 gtcttgaaat tcggtggtga tagaccaaag aaattacgtc gtttgtag