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LOCUS XM_708727 1686 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_708727 VERSION XM_708727.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1686) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1686) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1686) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1686) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1686) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1686) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_708727.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1686 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1686 /locus_tag="CAALFM_C601960WA" /db_xref="GeneID:3644559" CDS 1..1686 /locus_tag="CAALFM_C601960WA" /note="Ortholog of C. dubliniensis CD36 : Cd36_62090, C. parapsilosis CDC317 : CPAR2_602150, Candida tenuis NRRL Y-1498 : CANTEDRAFT_112751 and Debaryomyces hansenii CBS767 : DEHA2F11814g" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_713820.1" /db_xref="CGD:CAL0000199372" /db_xref="GeneID:3644559" /translation="MTSNKKLLKHIRTTNALSSIPPVLDILDRNDTSKLIVKYTYEIP VVLLRISDLGSAQGIIVFTDFSEIKTNTCMKYGRVPYSIAKEDYSVGGVIIPKDRLFN SSIRRDQYDTLAKMIERSVQGDPEDDGFLIAKLNFDLKIKNCKYLEGYFNHAEIATKK NLHDLFEKDLQYEFSEMLRRMKGFCEPDVYNELRVKYDFSSFEIFRKNRNRGDIELDS QLPDQKRRNFGGGIAANMLSNKIVKDSQRMNFDTQATQIHKTDFLQGPIIEEEVSNQP LNLDSQLPTVTNAVPPDPTDSYVSNAFEALNNTSSRQTGSNLLFHRPVSTRSSTTNQN TSNEGKSKGISQMVIPCTPIQSSNETNLEAPSFASVDTAAMSQDLGSQSEMVEPKIEP SNGLNLTSITVLPDWDNVTKKYLDRHENAKIRIKSIYAARNKMKSFQENVPYTLEKIK VKGMFPFHPIIIKPYARTWKITPFKIIAEDVEDKNLTLAIEISNDDEICKFFNINEIE DVVRKGQRINSQLQRLLNQKKEVLLNIKRKIRTLPNNFKYTYWTIDSPINQII" ORIGIN 1 atgacaagca acaagaagtt gttgaagcat attcgcacca caaatgcatt atcttcgatt 61 ccgccagtct tagatatttt agacagaaat gacacttcga aactaattgt taaatacacg 121 tatgaaatac ctgtggtgct tcttcgtatt tctgatttag gaagtgccca aggaataata 181 gtattcactg actttagtga aatcaaaaca aatacttgta tgaaatatgg tcgagtacca 241 tattcaatag ctaaggagga ctatagcgtt ggtggtgtta taattcctaa agacaggtta 301 ttcaattcgt caatcagacg tgatcaatat gatacattgg ctaaaatgat agagaggtcc 361 gtgcaggggg acccggaaga cgatgggttt cttatagcaa agctcaattt tgatttgaaa 421 ataaaaaact gcaagtattt agaaggatac ttcaatcacg ccgaaattgc aacaaagaag 481 aatctacatg atttgtttga aaaggacttg caatatgagt ttctggaaat gttgcgtaga 541 atgaaagggt tttgcgaacc tgatgtttat aacgaacttc gagtcaagta tgacttttct 601 tcattcgaga tttttcgtaa gaataggaat cgaggtgata ttgaattgga cagtcaatta 661 cctgatcaaa aacgtcgtaa ctttggtggt ggaattgcag ctaatatgtt gtcaaacaag 721 attgtaaaag atagccaaag aatgaatttt gatacacaag caacccaaat ccataaaaca 781 gactttttac aagggcccat catagaagaa gaggttagca atcaaccatt aaatttagat 841 tcccaactac ccacagtgac aaatgctgtg ccacctgatc caacggactc ttatgtttcc 901 aatgctttcg aagcactcaa taacaccagt agtcgtcaaa cagggtctaa tctattgttt 961 catcgccctg tgtctacaag gtcttccaca acaaatcaga acacgagtaa tgagggtaaa 1021 agcaagggca tttcgcaaat ggtcatccct tgcactccta ttcaaagctc aaatgaaacc 1081 aatttagaag caccaagttt tgcctctgtt gatacagcgg ccatgagtca ggatttggga 1141 tcccaactgg aaatggtaga gccgaaaatt gaaccaagta atggcctcaa tttaacaagt 1201 ataacagttc tacctgattg ggataatgta actaagaagt atttggacag acatgaaaat 1261 gctaagatca gaatcaagag catatatgca gctcgaaaca aaatgaaatc ttttcaagag 1321 aatgttcctt atactttgga aaaaatcaaa gtcaaaggga tgtttccttt tcatccaatt 1381 atcatcaaac cctatgcacg aacatggaaa ataactccat tcaaaattat tgccgaagat 1441 gttgaagaca aaaatttaac attggcaatt gaaattagta acgacgacga aatctgcaaa 1501 tttttcaata taaatgaaat tgaggacgtc gttcgaaaag gacaaagaat caactctcaa 1561 ttgcaacggt tactaaacca gaagaaggag gtattgctaa atatcaaaag gaaaatcagg 1621 acacttccca acaactttaa gtatacttat tggaccattg actctccaat taaccaaatt 1681 atatag