Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_708726 1596 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_708726 VERSION XM_708726.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1596) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1596) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1596) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1596) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1596) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1596) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1596 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1596 /locus_tag="CAALFM_C601950CA" /db_xref="GeneID:3644558" CDS 1..1596 /locus_tag="CAALFM_C601950CA" /note="Protein of unknown function; regulated by Nrg1" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_713819.1" /db_xref="CGD:CAL0000174405" /db_xref="GeneID:3644558" /translation="MRFRRLPKKSEIKKVYLPSTATEYLEQGSIDEESGERWLGSDVS KCLRFFNKAYSNYIQAIKLDPKLLDAHYNSVRLLLHTYQTFKRIPSGHDIAIENASLE VVQNISDIRIAYENSLERVQQLGQVPNDLLYNYAIVYLEWLESQQEEQDDESSLSVSF EQVVEVYDRVQGIFQNLLNSQMEELERFVNDLQNIDTNNFSGGDIYIGNSSSSSDKTK QEELTSEEVVQPTDLFETVLSSYKLIQSVYENASSNDLIQTVSQSVAPLLQINDNVAN ELIIKYSESSHVNSMISNITLKDVNELKLVKLNLLALAETDIFRSLDIWKNDNEIPET LPEKFMVASDSVQALLDRNDINLLTVNSQGTESDKDTFWKILTFQNNMLKRAQELLNE SMQLQKKSNLQSEDLGSLIVQVSEVIIARADIELQRSSINNYSSSVNNHSVLMTNCKN LLKNAINIANLNGGLRERMMVKINREQCKLEAVFRLCILENRTSIEELDKVMTRNKWV NELPNLKKSGLYDDFGLNKIIVP" ORIGIN 1 atgagatttc gcagattacc caaaaaatca gaaattaaaa aagtgtattt accatctact 61 gctacggaat atttagagca gggatcaatt gatgaagagt ctggtgaaag atggttgggt 121 tcggatgtga gcaaatgttt gaggtttttt aataaagcat actcgaacta tatccaagcc 181 ataaagttag atcccaagtt attggatgcc cattataatt ccgtgagatt gttgttgcat 241 acataccaaa ctttcaagag aataccgtca ggtcatgaca ttgcaattga aaatgcatca 301 ttggaagtgg tacaaaatat atcagacata cgaattgctt acgagaatag tttggaacgt 361 gttcaacagt tgggccaagt accgaatgac ttactatata actatgcgat tgtttatctc 421 gagtggctag agtcgcagca agaagaacaa gatgacgaaa gtagcttgct ggtgagtttt 481 gaacaggtag tagaggtata tgatagagta caaggcattt ttcaaaactt actaaacagt 541 cagatggaag aactagagag atttgtaaat gatctacaaa atattgatac caataatttc 601 agtggtggtg atatatacat tggaaatagc tcgagtagca gtgataaaac aaaacaggaa 661 gagcttacaa gtgaggaagt tgtccagcca acagacttgt ttgaaactgt attgtcgtca 721 tacaagttga ttcaatcagt ttatgagaat gcttcgtcaa atgatttgat acagacagtt 781 agtcaatcag ttgccccttt gttacagata aatgataatg tggccaatga gttgatcata 841 aagtacagcg aatcttcaca tgtcaacagc atgataagca atataacgtt gaaggatgta 901 aatgagttga agttggttaa attgaatctt ctagcattgg cagagacgga tatatttaga 961 ctgttggata tatggaaaaa tgataatgaa atacctgaaa cattaccaga aaagttcatg 1021 gtggcatctg atagtgtaca agcattattg gatagaaacg acataaattt attgacggta 1081 aattcccaag gtacagaatc tgataaagat acattctgga agattctcac ttttcagaat 1141 aacatgttga aaagagccca agagttgttg aatgagctga tgcaattaca aaaaaagagt 1201 aacttgcaac tggaagattt gggtagttta atagttcaag tgagtgaagt cattattgct 1261 agagctgata tagagttgca aagaagtctg atcaacaact attcttcgtc agtgaataat 1321 catctggtat taatgaccaa ctgcaaaaat ttattgaaga atgctattaa cattgccaac 1381 ttaaatggtg gattgaggga gagaatgatg gtaaaaataa atcgcgagca atgcaaatta 1441 gaagctgtct tcagattatg catcttggaa aataggacca gtattgaaga gctagataaa 1501 gtcatgacga gaaacaaatg ggtcaatgaa ttgccaaatt tgaaaaaact gggactttac 1561 gatgactttg gattaaataa gataattgta ccttga