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LOCUS XM_707422 1302 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707422 VERSION XM_707422.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1302) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1302) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1302) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1302) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1302) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1302) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1302 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1302 /gene="HRR25" /locus_tag="CAALFM_C602340WA" /db_xref="GeneID:3645878" CDS 1..1302 /gene="HRR25" /locus_tag="CAALFM_C602340WA" /note="Predicted protein serine/threonine kinase; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="serine/threonine protein kinase" /protein_id="XP_712515.1" /db_xref="CGD:CAL0000187651" /db_xref="GeneID:3645878" /translation="MDLRVGKKYRIGRKIGSGSFGDIYLGTNIISGEEVAIKLENTKA KHPQLEYEAKVYKALSGGVGIPFVRWYGTECDYNAMVIDLLGPSLEDLFNYCNRKFTY KTVLLLADQLICRIEYIHARCFIHRDIKPDNFLMGIGRRGSQVNVIDFGLAKKYRDPR THLHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLIYFCRGSLPWQGLKA ATKRQKYDRIMEKKMTTPNNILCKGLPSEFLEYMNYVKTLRFDDKPDYPYLRKLFRDL FKKENYRYDYVFDWTLYKFQQEKQRAQQGKVADGDNQDQQQQQNNQNQTQTQNQQGQI TAPQPPVPVSQQQQQQQQIPQHIPTPQQISQQQQQQQQQQQQLPPQQQKTSVTPQLQQ YTDQRLQNQRAVYQSNQNYSGTKSAQPQAQQPPQQGNPAWL" misc_feature 22..846 /gene="HRR25" /locus_tag="CAALFM_C602340WA" /note="Catalytic domain of the Serine/Threonine protein kinases, Casein Kinase 1 delta and epsilon; Region: STKc_CK1_delta_epsilon; cd14125" /db_xref="CDD:271027" misc_feature order(43..63,67..69,106..108,112..114,244..258,262..264, 268..270,382..384,388..390,394..399,403..405,445..447, 454..456,523..534) /gene="HRR25" /locus_tag="CAALFM_C602340WA" /note="active site" /db_xref="CDD:271027" misc_feature order(43..63,67..69,106..108,112..114,244..258,388..390, 394..399,403..405,445..447) /gene="HRR25" /locus_tag="CAALFM_C602340WA" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:271027" misc_feature order(55..57,262..264,268..270,382..384,388..390,394..396, 454..456,523..534) /gene="HRR25" /locus_tag="CAALFM_C602340WA" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:271027" misc_feature order(442..474,478..534) /gene="HRR25" /locus_tag="CAALFM_C602340WA" /note="activation loop (A-loop); other site" /db_xref="CDD:271027" ORIGIN 1 atggatttaa gagttggtaa gaaataccgt attggtcgta aaattggatc aggttcattt 61 ggtgacattt atttaggaac caacattata tcaggtgagg aagttgctat caaattggaa 121 aacactaaag ccaaacatcc acaattggaa tatgaagcca aagtttataa agcattgagt 181 ggtggtgttg gtattccatt tgttagatgg tatggtactg aatgtgatta taatgccatg 241 gttattgatt tattgggtcc atctttagaa gatttgttca attattgtaa tcggaaattc 301 acttataaaa ctgttttgtt attggctgat caattaattt gtcgtattga atacattcat 361 gccagatgtt ttattcatcg tgatattaaa cccgataatt tcttaatggg tattggtaga 421 agaggttctc aagtaaatgt cattgatttt ggattagcta agaaatatag agatccaaga 481 actcatttac atatccctta cagagaaaat aagaatttga caggtactgc cagatatgct 541 agtgtcaata ctcatttagg tattgaacaa agtagaagag atgatttgga aagtttaggt 601 tatgttttga tttatttctg tcgtggatct ttaccatggc aaggattgaa agccgctaca 661 aaaagacaaa aatatgatag aattatggaa aagaaaatga ctactccaaa caatatttta 721 tgtaaaggat taccatcgga atttttggaa tatatgaatt atgtgaaaac attaagattt 781 gatgataaac cagattatcc atatttaaga aaattgttta gagatttatt caaaaaagaa 841 aattatagat atgattatgt ttttgattgg actttataca agtttcaaca agaaaaacaa 901 agagctcaac aaggtaaagt agctgatggt gacaatcaag atcaacaaca acaacaaaat 961 aatcaaaatc aaactcaaac tcaaaatcaa caaggccaaa taacagcacc acaaccacca 1021 gtaccagtat cacaacaaca acaacaacaa cagcaaattc ctcaacatat accaacacca 1081 caacaaatat cacagcaaca acagcaacaa cagcaacaac aacaacaact cccaccacaa 1141 caacaaaaaa cttctgtcac tccacaatta caacaataca ctgatcaacg tcttcaaaat 1201 caacgagctg tatatcaact gaatcaaaat tatagtggca ctaaatctgc tcaaccacaa 1261 gcccaacaac ctccacaaca aggtaatcca gcatggcttt aa