Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_707421 561 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707421 VERSION XM_707421.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 561) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 561) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 561) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 561) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 561) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 561) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707421.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..561 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>561 /locus_tag="CAALFM_C602330WA" /db_xref="GeneID:3645877" CDS 1..561 /locus_tag="CAALFM_C602330WA" /note="Described as a Gag-related protein; hyphal induced; downregulation correlates with clinical development of fluconazole resistance; repressed by nitric oxide, 17-beta-estradiol, ethynyl estradiol" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_712514.2" /db_xref="CGD:CAL0000187820" /db_xref="GeneID:3645877" /translation="MAIKDRVKRVSKIFTSDSKESLKKEEQQAKDTKEIEPSTTTEDA AAAAAEVKASTEGEATKDATATATATEGEVAPTATETKAEAEAEAEAEPVVVAAAAEA TPKEVATEEQPSPSADITEEVAEPTADKKEGETETEGAATATEAKDAKSEIKDSAEKT EKAVKKNEFFKKFISKFKKNSHAAKN" ORIGIN 1 atggctatta aagacagagt taagagagtt tctaaaattt ttacttccga ctccaaagaa 61 tctttgaaaa aagaagaaca acaagctaaa gatactaaag aaattgagcc atccactaca 121 actgaagatg ctgctgctgc tgctgctgaa gtaaaagctt ccactgaagg tgaagctacc 181 aaagatgcta ctgccactgc cactgccact gaaggtgaag ttgcaccaac tgccactgaa 241 actaaagctg aagccgaagc tgaagctgaa gctgaaccag tagtggtagc tgcagctgca 301 gaagccactc ctaaagaagt tgcaactgaa gaacaaccaa gtccatcagc tgatattact 361 gaagaagttg ccgaaccaac tgctgataaa aaagaaggtg aaactgaaac tgaaggtgct 421 gctactgcta ctgaagctaa agatgctaaa tctgaaatca aagattctgc tgaaaagact 481 gaaaaggctg ttaaaaagaa tgaattcttt aagaagttta tttctaaatt caaaaagaat 541 tctcatgctg ctaagaattg a