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LOCUS XM_707415 1830 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707415 VERSION XM_707415.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1830) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1830) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1830) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1830) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1830) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1830) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707415.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1830 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1830 /gene="ALG11" /locus_tag="CAALFM_C602270CA" /db_xref="GeneID:3645871" CDS 1..1830 /gene="ALG11" /locus_tag="CAALFM_C602270CA" /note="Alpha-1,2-mannosyltransferase; catalyzes sequential addition of 2 terminal alpha 1,2-mannose residues to the Man5GlcNAc2-PP-dolichol intermediate during asparagine-linked glycosylation in the ER; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="alpha-1,2-mannosyltransferase" /protein_id="XP_712508.2" /db_xref="CGD:CAL0000201912" /db_xref="GeneID:3645871" /translation="MYLILLVVLAVYVTYKLITTVLPHHLLIPSQNWREKISYVVKYP KPIYLKVGTKRSSYRRRLILASENPAFYTNFINNKLKISPNDCENGDGFLNEMSRRDI DDPKRRIIYGFFHPYANNGGGGERVLWQAVKATLLADDKNICVIYTTNIEAQPLDILN KANKKFQIDGLDHSRVVFIYLRKFNNLIDGNYWKHFTLIGQLFGGILLSLEAMYELSP DVWIDTMGLPSSYLLVSLSLKIPILAYTHFPILQEDMFGKLKFQKLKDLWKFNIIKFN DYFALGKFIYWSILYYFYVYLGSKVNIALANGSWTFNHLSKIWVFNTALGNVLDVLYP PCGTEFLIKQANLNQPRSNKLLYLAQFRPEKRHALLLKEYSNFLSNNFPNVTQITNKF PTLVFAGSCRTADDTATLKFLQEQVAKLDLSRFVEFRIDISYDEVVELLSSCKFGLNA MWNEHFGIGVVEYMARGCTPIVHASAGPLLDMIGRNDQQENCLNNWKTDGGFFFKSYD DPDLDPNLQKNTETGYIKFELFDQFIDYPTFETLLKELYVNDPTIIEDSKLLKMRQID QNRVAEKFSNKAFNKKWIEYINDLNTLEKQYREEKRTKVEQVY" misc_feature 325..1746 /gene="ALG11" /locus_tag="CAALFM_C602270CA" /note="alpha-1,2-mannosyltransferase ALG11 and similar proteins; Region: GT4_ALG11-like; cd03806" /db_xref="CDD:340835" ORIGIN 1 atgtatttaa tactattggt ggtattagcc gtatatgtca catataaact cataacaact 61 gtattaccac atcatttact cattcctagt caaaattggc gagagaaaat atcatacgtt 121 gttaaatatc caaaaccaat ttatttaaaa gttggaacta aacgatcaag ttatcgtcgc 181 agattgattt tagccagtga aaatcctgcc ttttatacta attttatcaa taataaattg 241 aaaatatcac ctaatgattg tgaaaatgga gatggatttc ttaatgaaat gagtagaaga 301 gatattgatg atccaaaacg tcgtattatt tatggatttt tccatccata tgccaataat 361 ggaggtggtg gagaaagagt attatggcaa gcggttaaag caacattatt agctgatgat 421 aagaatattt gtgtcattta taccacaaat attgaagctc aaccattaga tattttaaac 481 aaagccaaca aaaaatttca aattgatgga ttagatcatt caagagttgt tttcatttat 541 ttaagaaaat ttaataattt gattgatggc aattattgga aacattttac attgattgga 601 caattatttg gtgggatatt attaagtctt gaagccatgt atgaattatc acccgatgta 661 tggattgata ctatgggatt accaagtagt tatttacttg tttctctttc attgaaaata 721 ccaattcttg cctatactca tttccccata ttacaagaag atatgtttgg taaattaaaa 781 ttccaaaaac taaaagattt atggaaattt aatattatta aatttaatga ttattttgca 841 ttagggaaat ttatttattg gtcaatatta tattattttt atgtttattt aggttcaaaa 901 gttaatatcg ctttagcaaa tggaagttgg acatttaatc atttatcgaa aatttgggtt 961 ttcaatactg ctttaggtaa tgttttagat gtattatatc ccccatgtgg taccgagttt 1021 ttaatcaaac aagccaattt aaatcaacct cgatctaata aattattata cttggcacaa 1081 ttccgtcctg aaaagcgtca tgctttatta ttaaaagaat attccaattt tttatcaaat 1141 aatttcccca atgtgactca aatcaccaac aaattcccta cattagtatt tgccggatct 1201 tgtcgaacgg ctgatgatac tgcaactttg aaatttttac aagaacaagt tgccaaatta 1261 gatttatcaa gatttgttga atttagaatt gatatatctt atgatgaagt ggtagagtta 1321 ttatctagtt gcaaatttgg tctaaacgcc atgtggaatg aacattttgg tattggagtg 1381 gttgaatata tggctagagg atgtaccccc attgttcatg cttcggcggg tccattatta 1441 gatatgatag gaagaaatga ccaacaagaa aattgtttga acaattggaa aactgatggt 1501 ggatttttct ttaaaagtta tgatgatcct gatcttgatc ccaatttaca aaaaaatact 1561 gaaactggtt atattaaatt tgaattattt gatcaattta ttgattatcc tacatttgaa 1621 acattattaa aagaattata tgtcaatgac cctacaatta ttgaagattc taaattactt 1681 aaaatgagac aaatcgatca aaacagagtt gcagaaaagt tttctaataa agcgtttaat 1741 aaaaaatgga ttgaatatat taatgatttg aatactttag aaaaacagta tagagaagag 1801 aaacggacta aagttgaaca agtttattga