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LOCUS XM_707403 1671 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707403 VERSION XM_707403.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1671) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1671) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1671) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1671) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1671) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1671) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707403.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1671 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1671 /locus_tag="CAALFM_C602160WA" /db_xref="GeneID:3645889" CDS 1..1671 /locus_tag="CAALFM_C602160WA" /note="Protein with a predicted serine/threonine kinase and tyrosine kinase domain; possibly an essential gene, disruptants not obtained by UAU1 method" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_712496.1" /db_xref="CGD:CAL0000180548" /db_xref="GeneID:3645889" /translation="MNYTRVNSSEELEVYEEVGRGGFGVVYRGIIKSTNQEVAIKQID LEKDSTDLIEINKEIQIISECHCQQITSYMGSFVKNYKLWVIMEFIDGGSIFELLKPG PIDDEKIVSFILYEILLALNYLHNQGKIHRDLKSQNILISKTGDIKLTDFGVSTQLSS NFSKRNTTVGTPYWMAPEVIVNNNGGHSYKADIWSLGCCCYEMFTGKPPLQSKYPPMR ALRLISKCQKNQDFIKLIELNELDISWEFKDFLHQCFIEDPKLRASASKLLKHKFITK HIHDKDKIKLLKKLITKKQLWNQQNHIVKTQNYYVPTEIYNNQLKWNMDDQNGNENQQ TELTKESGDQHTGNTIKFDISSLMLNNDLEDDIEEDVEDDAHEERKSSPSSEPNDDII GFFKNDFNNILTKIFNKIDNRNQLSRLQYDQLVEMNNLMGQLITNDNGGTNNNRKILL FQYLKYLIKELLKEKNSHINRLILPSSILHNTGTNGITTNISGNTLVNNNNHVTNMTN FTTNGILSSTTSTTTVNHNRTTSHTWTKFDEIESSLLESWINRMEQDN" misc_feature 28..837 /locus_tag="CAALFM_C602160WA" /note="Catalytic domain of Mammalian Ste20-like protein kinase 3-like Serine/Threonine Kinases; Region: STKc_MST3_like; cd06609" /db_xref="CDD:270786" misc_feature order(52..66,76..78,115..117,121..123,211..213,259..270, 277..282,289..291,397..399,403..414,418..420,448..453, 460..462,502..513,517..519,604..606,634..636) /locus_tag="CAALFM_C602160WA" /note="active site" /db_xref="CDD:270786" misc_feature order(52..66,76..78,115..117,121..123,172..174,211..213, 259..270,277..282,289..291,409..414,418..420,451..453) /locus_tag="CAALFM_C602160WA" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270786" misc_feature order(61..66,397..399,403..411,460..462,502..513,517..519, 604..606,634..636) /locus_tag="CAALFM_C602160WA" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270786" misc_feature order(448..483,487..519) /locus_tag="CAALFM_C602160WA" /note="activation loop (A-loop); other site" /db_xref="CDD:270786" ORIGIN 1 atgaattata ctagagtcaa ttcaagtgaa gaattagaag tatatgaaga agttggtcgg 61 ggtggatttg gagtagttta tcgaggtata atcaaatcaa caaatcaaga ggtagccatt 121 aaacaaattg atttagaaaa agatctgacg gacttgatag aaatcaataa agaaatccaa 181 atcatatcag aatgtcattg tcaacaaatc accagttata tgggatcatt tgtgaaaaat 241 tataaattat gggtgattat ggaatttatt gatggtggat caatatttga actattaaaa 301 ccaggaccaa tagatgacga aaaaattgtt agttttatct tgtatgaaat attattagca 361 ttgaattatt tacataatca aggaaaaatt catcgtgatt taaaaagtca aaatatttta 421 atatctaaaa ctggtgatat taaattgaca gattttggtg tgtcaacaca attgtcctca 481 aatttttcta aaagaaatac tactgtgggt actccatatt ggatggcacc tgaagtaatt 541 gttaataata atggtggaca tagttataaa gctgatatct ggtcattagg ttgttgttgt 601 tatgaaatgt tcacggggaa accaccatta caatcaaaat atcctccaat gagagcactt 661 cgattaattt ctaaatgtca aaagaatcaa gattttatta aattaattga attaaatgaa 721 ttggacatat cttgggaatt taaagatttc ttgcatcaat gctttattga agatcctaaa 781 ttaagagcaa gtgctagtaa attgttgaaa cataaattta ttacgaaaca tatccacgat 841 aaggataaaa ttaaacttct taaaaaatta attaccaaaa agcaattgtg gaatcaacaa 901 aaccatatag ttaaaactca aaattattat gtcccgacag aaatctataa taatcaactc 961 aaatggaata tggatgacca gaatgggaat gagaaccaac aaacagaact tacaaaggaa 1021 agtggagatc agcacaccgg taataccata aaatttgata ttagttcatt aatgttgaat 1081 aatgacttag aagatgatat tgaagaagat gttgaagatg atgctcatga agaacggaaa 1141 tcttctcctt caagtgaacc taatgatgat ataataggat ttttcaagaa tgatttcaat 1201 aatattttaa ccaaaatctt taataaaatt gataatagaa atcaattatc aagactacaa 1261 tatgatcaat tggttgaaat gaataatttg atgggtcaat tgattacaaa tgataatggt 1321 ggtactaata ataatagaaa gatattatta tttcaatatt tgaaatactt aataaaagaa 1381 ttattgaaag agaaaaattc acatatcaat cggttgatat taccatcaag tatactacat 1441 aacactggta ccaatggtat taccactaac atttcaggaa ataccctagt caataacaat 1501 aaccacgtga caaatatgac caattttacc accaatggga tattatcatc aacaacgtca 1561 acgacaacag taaatcataa caggacaact agtcatacat ggacaaagtt tgatgaaata 1621 gaatccagtt tattagagtc atggattaat agaatggaac aggataacta g