Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_707311 2502 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707311 VERSION XM_707311.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2502) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2502) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2502) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2502) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2502) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2502) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707311.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2502 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2502 /locus_tag="CAALFM_C604440CA" /db_xref="GeneID:3645983" CDS 1..2502 /locus_tag="CAALFM_C604440CA" /note="Ortholog of S. cerevisiae Spo71; a meiosis-specific protein required for spore wall formation during sporulation in S. cerevisiae; possibly an essential gene, disruptants not obtained by UAU1 method" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_712404.2" /db_xref="CGD:CAL0000175079" /db_xref="GeneID:3645983" /translation="MKRKFSFFVVVFFLWVYINTQSHVYWGTXXFTIPRSSYIASLLT VLGADALSNYGKGVFVGGYPGIWHNDKPDLITELLTRKDTNERVLQYSNDNDLFFKKR DAIIKELRNDTTTADITSEVSTIPVSLPKIKFEMPRPETKVNIDEQWIEEENKRFRKR LKRFAKKSTGGAIRASRSKIKASIFKSYEAGEIIRIDKVLVLVMKPPGSGRVSERWRE YIAVLRKTDSVAEPLMLQFYDIDKLPEESHPRVGFRLNTQVKADFYSYLDKTISLTVL EKVQYILRLNNQTNSFRWLYFIKETLGVETEINLFNIYVPRLRYFIEVEVPESVFANH FRSNQNIVVTKHEAGYEIECDGISQYLKQFLPKGLSRGWFCFRKYDRLEWAGSTGEQL FIQNMLFSQNHQLEYREYEASDVPPRPIEGFLGRLTNVSGKEKSVLRDFHKISYFYTN RNLLFFTKYYRAVPPPQGGDSLVNEVDLFGDGHMEWLESDFDGHNKAIVEEIGRRTDM IVKAEGVIDMADICEVNISHSTQTQNLVHCALWYYKPELASEKEIVDSCFEIQLKWGA LIKLQAQNRAARDIWITSLNDMCRYWKRRQTETLANHIQISANNIERLSATQYADSNA SDEINFLESQHAIACGASIPHLLPNMLVIKSGYLYEKNKKHASFNHFYVVLCPGYLII YHTFRRSRGTGTPKSTAFYEHYITIPLSQCYVYTGKLTELDLLNCETRTTQVDTHSVP RVYPDGWKSMEEDCELCFTLWFGKKRNISHYEKQLPKSLEVGVQNEKNPGMVTMIRKL GITGKSIMFTANSRQERDRWTMCILSEMDRLTGQM" misc_feature 91..261 /locus_tag="CAALFM_C604440CA" /note="Sporulation protein family 7; Region: Spo7_2_N; pfam15407" /db_xref="CDD:434700" misc_feature 1960..2478 /locus_tag="CAALFM_C604440CA" /note="Pleckstrin homology domain; Region: PH_4; pfam15404" /db_xref="CDD:434699" ORIGIN 1 atgaaaagaa aattttcatt ttttgttgtt gttttttttt tgtgggttta tatcaacaca 61 cagtcgcatg tctactgggg aacacasmky tttactatac ccagatcatc atacattgca 121 tcccttctaa cagttcttgg ggctgatgct ttatcaaact atggcaaggg cgtgtttgtt 181 ggaggatatc ctggcatctg gcataacgac aaacctgatt tgattaccga gttgttgaca 241 cgaaaagata caaacgaacg ggtattacag tacagtaatg acaatgattt attctttaaa 301 aagcgagatg ccattatcaa agagctacgg aatgatacca ctacagcaga tatcacttca 361 gaagtatcca ctatccctgt ttcactccca aaaataaagt ttgaaatgcc tcgtcctgaa 421 accaaagtca atatagacga gcagtggatc gaggaggaaa acaagagatt tagaaaacgg 481 ttaaagagat ttgccaaaaa gtcaactggt ggcgcaatca gagcatcgcg tagcaagata 541 aaggcgtcaa tttttaaatc atacgaggct ggagagataa tcagaattga caaggtgtta 601 gtgttggtga tgaaaccacc aggcagtggg cgggtttctg aacgatggag agagtatatt 661 gctgttttga gaaaaaccga cctggttgcc gagcctttga tgttgcagtt ttatgatatt 721 gacaagttgc ctgaagaatc gcatccgcga gttggattca ggctcaacac acaagttaaa 781 gcggactttt atagttattt ggacaagact attagtttaa cggtgcttga aaaagtgcaa 841 tacatcttaa gactcaacaa ccaaacaaat tcgttcagat ggctatattt tataaaggaa 901 acattgggcg ttgagaccga aattaacttg tttaacatat atgttcccag gctacggtat 961 tttattgagg tggaagtacc agaaagtgtt tttgccaatc actttaggag caaccaaaac 1021 atagttgtga caaagcacga ggctggctat gaaattgaat gtgacgggat ttcccagtac 1081 ttgaagcagt ttcttcctaa gggcttgtcg agagggtggt tttgcttcag aaaatatgat 1141 aggttggagt gggcaggaag taccggagag caattgttta tacagaatat gctatttctg 1201 cagaatcacc agctagaata tagagaatat gaggcatccg atgttccacc cagaccaata 1261 gaaggttttt tgggaaggtt gactaatgtt agtggtaaag agaaatctgt gttacgagat 1321 ttccataaaa tactgtactt ctacacgaat agaaacttat tgtttttcac aaagtactac 1381 cgggcagtgc cgccaccaca aggaggtgat tctttggtga acgaagttga tttgtttggt 1441 gatggtcata tggagtggtt ggagtcagac tttgatggac ataacaaagc tattgtggag 1501 gaaattggac gacgaacaga tatgatagtc aaagctgaag gggtgattga catggcagat 1561 atatgtgagg ttaacatctc acactcaaca caaactcaga atttagttca ctgcgcgtta 1621 tggtattaca agccggagtt ggcgagtgag aaagagattg ttgattcttg tttcgaaata 1681 caacttaaat ggggtgccct aatcaagttg caggcacaga atcgggcggc tcgtgatatt 1741 tggattacca gtctaaatga tatgtgtagg tactggaaaa ggagacaaac agagactctt 1801 gctaaccaca tacagatttc agctaataat attgagcgtc tactggcaac acaatacgca 1861 gactcgaatg cttcagatga gataaacttt ttagaatcac aacatgcaat agcttgtgga 1921 gcaagcatcc cgcatctact acctaatatg ttggtgatta agagtgggta tttgtacgag 1981 aagaataaaa aacacgccag tttcaaccac ttttatgttg tgctatgtcc tgggtatttg 2041 attatctacc acacctttag gaggtccagg gggacaggaa ctccgaaact gacagcattt 2101 tatgagcatt atattactat tccattgtca caatgctatg tatacactgg taaattaaca 2161 gaactagact tgttgaattg tgaaactcga acaacacagg tcgataccca ttcagtccca 2221 cgagtctacc ctgatggctg gaaatccatg gaagaagatt gtgaattatg tttcacatta 2281 tggtttggca aaaagagaaa cataagtcat tacgaaaaac agcttccaaa actgttggaa 2341 gtgggggtac agaatgaaaa aaatcctgga atggtaacaa tgattagaaa gttgggaata 2401 acgggaaaga gtattatgtt tacagctaat agtcgacaag aaagagatcg atggacaatg 2461 tgtatattaa gtgagatgga tcggcttacg ggtcagatgt aa