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LOCUS XM_707227 3231 bp mRNA linear PLN 18-APR-2022 (SRO77), partial mRNA. ACCESSION XM_707227 VERSION XM_707227.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 3231) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 3231) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 3231) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 3231) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 3231) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 3231) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..3231 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>3231 /gene="SRO77" /locus_tag="CAALFM_C600410CA" /db_xref="GeneID:3646088" CDS 1..3231 /gene="SRO77" /locus_tag="CAALFM_C600410CA" /note="Protein with a predicted role in docking and fusion of post-Golgi vesicles with the plasma membrane; filament induced; fungal-specific (no human or murine homolog)" /codon_start=1 /transl_table=12 /product="putative Rab GTPase-binding protein" /protein_id="XP_712320.1" /db_xref="CGD:CAL0000180340" /db_xref="GeneID:3646088" /translation="MFNKLKSRKAPLSLDSVSNAIKTRGTKSLSPEEINPKHIDLKVI NQLGIPQNSIVAVAYDPVQSLLAVSTTSNDVRVYGQLNVEVVFEFNIKHPITFLRFVK GVYLVCASPGAGLNILSLHSKKVLGTTSFPGTVTAMESDPSLDWLIMGLSNGSLMFYD VDRVNLTPFRIDNLQKKIMPKEKMSPVLSIEWHPRDIGTLLIAYQQSAIVYSLVSGEV KSVLVYQLSKDHRGFQLASHIANGGKKKIFGGSKEVIPKLKEAHFHPNGLHAVTVHED NSIVFWDIASGTILEARNVFDVHIHQPGTPLEIPEVFQPIETVQWVCGEDPENTKLIV SGGDSNSKNAIHVLDFGYTLKYSITSYEKQAEFYAQPQSGQRIIPVTFYLNKTEVEEV IKTILPITENGSPYFHGGHDPSFLLLVSNLGRIYFVSFAEHAGGQGSSDLGTVILPTS ISFIHPPLCAFDVEQVRRIDWYSIMSSRASTGATSKTKEMFFGGASVGLNNVSKPIGY DDSFRNILITGHESGLVRFLDVTKGEQHELEGIVQIGLRETLFDYGNPKSLRVIFVSC AFENRELLVALATGEVVVCKFGKNNRNAGLSATKDYSDCAVQHANKNAKLLDISGRVS GSLNASSTFLPTSLLQIEPPEPISVIKMSNVGFGAIGYKSGRLVVCDITRGPAVILNL ENIKEHLVSVQGNCYPTSIEFSIQEYGNDGYSSIVLLVGTNCGGNLVTFRITPMGNGG FEVVFADKTAHLNYRTTDASGAEGSCISQIIPINSVTGESAVANMSTFNKLSQGIVIP AYVIATSDREIRVLKLPKQKLSHKVVEDFCLKCSVVNYHNKGIVLAILVKSGFVKLCS LPSLSDIANVKLPKEVYAQVKESLESGMATQSDLLRSGELFVRYSKTESVYITTNEKT RHKDDTNTDRLFNENAIIPPRPTASTLSWAKGQISYVSVDDLAMLVAGPNRKPPKNTE SQLAYNISPEANPQSNYGGYNPQKGRDSDKSKSSSPYDQPVRRGTNNSGGLGSQGFMR SLQNSIQTVEETFNDYANQASQTFTEGIEDQKKSMYSAAVKSKFGF" misc_feature 154..870 /gene="SRO77" /locus_tag="CAALFM_C600410CA" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature 1672..2907 /gene="SRO77" /locus_tag="CAALFM_C600410CA" /note="Lethal giant larvae(Lgl) like, C-terminal; Region: Lgl_C; pfam08596" /db_xref="CDD:400768" ORIGIN 1 atgtttaaca aattaaaact gagaaaagca cctttgtcat tggattcagt ttcaaatgcc 61 atcaaaacaa ggggtacaaa gtctctttcc ccagaagaaa tcaatccaaa acatattgat 121 ttaaaagtga tcaatcaact tgggattccc caaaattcaa ttgttgcagt ggcttatgat 181 ccagtacaat ctttattagc agtttcaacc accagcaacg atgttcgagt atatggacag 241 ctaaatgtcg aagttgtatt tgaattcaac attaaacacc ctatcacgtt tcttcgattt 301 gttaagggag tatatcttgt ctgtgcctca ccaggtgctg gtttgaatat attatcattg 361 cactccaaaa aagtgttagg aacaactctg tttcctggaa cagttacagc tatggaatca 421 gacccttcat tggattggtt gattatggga ttgtcaaacg gtagtttaat gttttatgat 481 gttgacagag taaatttaac acctttcaga attgataatt tgcagaagaa aataatgcca 541 aaggagaaaa tgtcaccagt tttgtccatt gaatggcatc ctcgtgatat tggtacttta 601 ttgattgcat accagcaatc tgcaattgtt tactcacttg tatcaggcga agtgaaaagt 661 gtcttggtat accagttatc aaaagatcat agaggctttc aattggcgtc tcatattgca 721 aacgggggga agaagaagat atttggtggt tccaaggagg taatccctaa actaaaggaa 781 gcccatttcc atccaaatgg attacacgcc gtcacagtgc atgaagacaa ttcgatagta 841 ttctgggata tagcaagtgg tacaatttta gaagctagaa acgtttttga tgtgcacatt 901 catcagccag ggacgccatt agaaattccc gaggtatttc aacccattga gaccgttcaa 961 tgggtttgtg gtgaagatcc agagaacaca aagttgattg taagcggcgg agattctaat 1021 tccaagaatg ccattcacgt tttagatttt ggctatactt tgaagtactc aattacatcg 1081 tatgaaaaac aagctgaatt ttacgcacaa ccacaatcag gacaaagaat cattccagta 1141 acattttatt tgaataagac agaagtagaa gaggtgataa aaaccattct accaattact 1201 gaaaatgggt cgccttattt ccatggtggt catgatcctt cttttttgtt gttggtctca 1261 aatttgggac gaatttattt tgtttcattt gccgagcatg ctggtggtca aggatcatct 1321 gatttaggca cggttatttt gcccacctct atatcattta ttcacccacc tttatgtgcc 1381 tttgatgttg agcaagtgag aagaattgat tggtatagta ttatgtccag cagagcatcg 1441 acgggagcaa catccaaaac aaaggaaatg ttttttggtg gtgcatcggt aggcctcaac 1501 aatgtgctga aaccaatagg atatgatgat tcttttagga acatcttgat taccggtcac 1561 gaaagtggtt tggtgagatt tcttgatgtt accaaaggtg aacaacatga gttagaaggg 1621 attgtgcaaa ttggtcttcg cgagacttta tttgattacg ggaatccaaa gtcgttgaga 1681 gtcatatttg tgtcatgtgc atttgagaac cgtgaattac tagtagcatt agcgacaggt 1741 gaggttgttg tttgcaagtt tggcaaaaac aacagaaacg ctgggttatc ggcaactaaa 1801 gattacagtg attgtgcggt acaacatgca aacaaaaatg ccaaactttt agatattagt 1861 ggaagagtcc tgggctcatt aaatgcgtca tcaacatttt taccaacaag tttgttgcaa 1921 atcgagccac cagaacctat ttcggtgatc aagatgagta atgtcggttt tggggctatt 1981 ggttacaaat cgggaagatt ggttgtctgt gatattacaa ggggtcctgc tgtgatactc 2041 aatcttgaaa atataaaaga acaccttgtg tcagtacaag gaaactgcta cccaacgtct 2101 attgaatttt ccattcaaga atatggcaat gacggctact catccatagt tttgttggta 2161 ggaacaaatt gtggcggtaa tctcgtgaca tttagaatta ctccaatggg gaatggtggc 2221 tttgaggttg tttttgcaga caaaacagca catttgaatt acagaactac tgatgccagt 2281 ggagctgaag ggtcgtgtat ttcccaaata attccgataa actcagtgac cggtgagtct 2341 gcagttgcaa atatgagcac attcaacaaa ctcagtcagg gaattgttat tccagcatat 2401 gttattgcca cctctgacag agaaattcgt gttctcaagc taccaaagca aaagttatca 2461 cacaaagttg ttgaggattt ctgtttgaaa tgcagtgttg tgaactatca caataaaggt 2521 attgtattgg ccattttagt gaaatctggg tttgtcaaat tatgttcgtt gccatctttg 2581 tctgatatag ctaatgtcaa attgcccaag gaggtttatg ctcaagttaa agaatcactt 2641 gaatcaggaa tggcaactca gtcagattta ttacgttcag gtgaattatt tgttaggtac 2701 tctaaaacag aatcagttta tatcacgaca aatgaaaaaa ctcgccacaa agatgacaca 2761 aatacggatc gattgtttaa cgaaaatgcc attattccac cacgtccaac tgcaagtaca 2821 ttactgtggg caaaaggtca aatcagttat gtttcagttg atgatttagc catgttggtt 2881 gcgggaccaa accgtaagcc tccaaagaac acagagtcac aattggcata taatataagc 2941 cctgaagcta atccacagag caattacgga ggatataacc cgcaaaaagg cagagattct 3001 gacaaaagta aaagttcgag tccatatgac caaccagtaa gacgtggcac taataacagc 3061 ggaggtttgg ggtctcaagg atttatgaga agtcttcaaa atagcattca aacagtggaa 3121 gagactttta acgactatgc aaaccaagcc agtcaaacat tcaccgaagg tatagaggac 3181 cagaagaaat caatgtacag tgctgctgta aaaagtaagt ttggatttta a