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LOCUS XM_707226 1335 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707226 VERSION XM_707226.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1335) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1335) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1335) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1335) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1335) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1335) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1335 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1335 /locus_tag="CAALFM_C600400CA" /db_xref="GeneID:3646087" CDS 1..1335 /locus_tag="CAALFM_C600400CA" /note="Ortholog of C. dubliniensis CD36 : Cd36_60350, C. parapsilosis CDC317 : CPAR2_603550, Candida tenuis NRRL Y-1498 : CANTEDRAFT_114325 and Debaryomyces hansenii CBS767 : DEHA2G04950g" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_712319.1" /db_xref="CGD:CAL0000179379" /db_xref="GeneID:3646087" /translation="MNNKENIPTTPKSKESRIISAVSPINNQTLKPISPNKEKNQIGK LNFLETDNLDEHFELVHTTQEEIRQRLHNIELTSKQTSVDLGQLFDRSKNNNENLNKL LRNVVSYSEKVMTEGNATKADMEKILTRLDKLSEARSKSESSKVGISDSSIEEICEAI GQVFSANQKNHGDADKLTILKEEVSRIKDIISKHNEVVSSQLKSHDTKQSELANHLDS YLQESKGNIEILHKILSFIETRGSDLQQFKEINSQLQNLETVSNALQDKLPASDLVNQ ITSPIVAEIKAMSLDSKYLTSFEGISAAIDKLRETIEEGPKSEVILEKLEKLAGEKNT SNTLLEKEQEMENKIRKMEDKYALLSTRYEEKLQQYKDLSIKYQQLQAQIEDTQMPQN NRESKMEKLRNFHKLKIGEIEQSEFINERKRIASTPVVQTRNIQFTNNSDED" misc_feature 520..>1155 /locus_tag="CAALFM_C600400CA" /note="Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning]; Region: EnvC; COG4942" /db_xref="CDD:443969" ORIGIN 1 atgaataata aagagaatat acccacaaca ccaaagagca aagaaagcag aattatttcc 61 gctgtttcgc cgattaacaa ccaaacgttg aaaccaatct cacctaacaa agagaagaat 121 caaattggca aattaaattt tttggaaaca gacaatttag atgagcattt tgaacttgtt 181 cataccactc aagaagaaat ccgacaacga ttgcacaata ttgaattgac atcaaagcag 241 actagtgttg atttaggaca attatttgat agactgaaaa ataacaatga aaatttgaat 301 aaactattac ggaatgtggt gtcttattct gaaaaagtaa tgacagaagg aaatgcaacc 361 aaagcagaca tggagaaaat tttgactcgg ttggataagc ttagcgaggc aagaagcaaa 421 tctgaaagtc tgaaagtggg aatttctgat agttctattg aagaaatttg tgaagcaata 481 ggacaggtat tcagtgccaa tcagaagaac cacggggatg ctgacaaatt gactatactc 541 aaagaagaag tatctagaat aaaggatatc atcagcaaac ataatgaagt tgttagttct 601 caattaaagt cgcatgatac gaaacaaagc gaattggcaa atcatttaga ttcatacttg 661 caagaatcaa aaggaaacat tgaaatctta cataaaatac tttcatttat tgaaacaagg 721 ggatctgatt tgcaacagtt caaagaaatt aattcacaac tacaaaatct agagacagtc 781 agtaatgcat tacaagacaa attgcctgct tcagatttgg ttaatcaaat aacaagccca 841 atagtagcag aaattaaggc gatgtctcta gactctaagt atttgacttc atttgaaggt 901 atttcggcgg ctattgataa attaagagag acaattgagg aaggacctaa gtcagaagtt 961 atactcgaaa agttagagaa gcttgcggga gaaaagaaca ccagcaatac tctactagag 1021 aaagagcagg aaatggaaaa caagattcgg aaaatggaag acaagtatgc tttgcttagt 1081 acaagatatg aggaaaagct tcaacagtat aaagatttac tgatcaagta tcaacagtta 1141 caagcacaaa ttgaggacac tcaaatgccc caaaataatc gagaatcaaa aatggaaaaa 1201 ttgagaaatt ttcataaact taaaattggg gaaattgagc aaagtgaatt catcaacgaa 1261 aggaaacgta tcgctagtac tccagttgtg caaactagaa atattcaatt taccaacaat 1321 tcagatgaag actga