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LOCUS XM_707207 894 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_707207 VERSION XM_707207.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 894) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 894) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 894) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 894) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 894) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 894) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..894 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>894 /locus_tag="CAALFM_C600240CA" /db_xref="GeneID:3646062" CDS 1..894 /locus_tag="CAALFM_C600240CA" /note="Ortholog(s) have SNAP receptor activity, phosphatidylinositol-3-phosphate binding activity and role in CVT pathway, macroautophagy, piecemeal microautophagy of nucleus, vacuole fusion, non-autophagic, vesicle fusion" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_712300.1" /db_xref="CGD:CAL0000193320" /db_xref="GeneID:3646062" /translation="MSTITIPQDIEIGGSTYYQINIKLPLRSFTIKKRYSEFQQLVSD LSRSLGIDSRDFPYELPGKRINWLNKTSIVEERKVGLAEFLNNLIQDSTLQNEREVLS FLQLPSNFRFTKDMLQNNRADLDSVQNNWYDVYRKLKSDILNESSSSISEQIHIRDRI SRVYQPRILDLVRAIGTDKEEALKKKQLVSQLQESIDNLLVQEVPRSKRVLGGAVKET PETLPLNNKELLQHQVQIHQNQDKELDQLRVLIARQKQIGELINAEVEEQNEMLDRFN EEVDYTSSKIKQARRRAKKIL" misc_feature 10..321 /locus_tag="CAALFM_C600240CA" /note="The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi; Region: PX_SNARE; cd06897" /db_xref="CDD:132807" misc_feature order(100..108,184..189,229..231) /locus_tag="CAALFM_C600240CA" /note="phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:132807" misc_feature 709..885 /locus_tag="CAALFM_C600240CA" /note="SNARE motif of VAM7; Region: SNARE_VAM7; cd15858" /db_xref="CDD:277211" misc_feature order(721..732,736..744,748..756,760..765,769..786, 790..795,799..804,811..816,820..828,832..840,844..849, 853..858,865..870,874..879,883..885) /locus_tag="CAALFM_C600240CA" /note="heterotetramer interface [polypeptide binding]; other site" /db_xref="CDD:277211" misc_feature 802..804 /locus_tag="CAALFM_C600240CA" /note="zero layer; other site" /db_xref="CDD:277211" ORIGIN 1 atgtcaacaa ttactatccc ccaagatata gaaattggtg ggtcaacgta ctatcaaatt 61 aatataaaac taccactccg atcattcacg ataaagaaac ggtacctgga attccagcaa 121 ttggtgctgg acttgagtcg tagtctaggt attgatagtc gggattttcc atatgaatta 181 cctgggaaac ggatcaactg gcttaacaag accagtattg ttgaggagag aaaagtggga 241 cttgcagaat ttctcaataa cctcattcaa gactcaacac ttcagaatga acgagaagtg 301 ttgtcgtttt tgcaattgcc gtctaatttt agattcacca aggatatgtt acagaataat 361 cgagcagact tggattctgt gcaaaataac tggtacgatg tgtatcgtaa gttgaaactg 421 gatatactca acgaatcgtc tagtagcatt agtgaacaga tacatattcg agatcgcatt 481 agtcgggtct accaaccacg gattctcgac ttggtcaggg ctattggtac agataaagaa 541 gaggccctaa agaagaagca gttggtttcc caattacaag agagtataga taatttgtta 601 gtacaggaag ttccccgatc aaagagggtg ttgggtggag cagttaagga aacgccagag 661 acattaccat taaacaataa agaacttctt caacaccaag tacaaattca tcaaaaccaa 721 gacaaagaac tagaccagct tagagtgtta attgcccggc agaaacagat tggcgagcta 781 attaatgcag aagtagagga acagaatgaa atgttggata ggtttaatga agaggtcgac 841 tacacgtcca gcaaaatcaa gcaagcaaga cgcagagcta agaagatatt atag