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LOCUS XM_707013 2379 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_707013 VERSION XM_707013.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2379) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2379) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2379) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2379) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2379) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2379) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707013.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2379 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2379 /gene="FLO8" /locus_tag="CAALFM_C604350CA" /db_xref="GeneID:3646292" CDS 1..2379 /gene="FLO8" /locus_tag="CAALFM_C604350CA" /note="Transcription factor; required for hyphal formation and CO2 induced white-opaque switching; regulates hyphal gene expression; required for virulence in mouse systemic infection; binds Efg1p; binds Mss11p via LisH motif; has LUFS domain" /codon_start=1 /transl_table=12 /product="Flo8p" /protein_id="XP_712106.2" /db_xref="CGD:CAL0000178880" /db_xref="GeneID:3646292" /translation="MVPNTTKQVLNSLILDFLVKHQFQDTAKAFSKESPNLPSIPPLM DCSQGFLLEWWQVFFDLFQVRYGDGNSNNNPNNKLYHDYLRVQETQKHLFSQLPLIQQ QQQQQHHFQQQQQQQGQQGQPFSQQQQRGIGVASGMQNQQHQFAPQHQGQPQGPGQTP QPPGSATNANFPINMPPNSNPQQQMFPINQQFAQMPNGQNQPSMEQQQRMAMMMKQQA MAAQRQQIPMNGLDPQQQQQMMNAVGGGPGNLNLQQQLFLQQQQQQQQQPKTTFQQQA QNQMNNLRQQAAMVAQQQQQQQQQQQQQGQLQGNLASAMGDSSSKNNSPVGARSNQQS TPQQNAAPAPSPHPSQQGQAQAQHNFQSQQQQQQQQMTKMAGSQGMKKNGQMSNGTSN NSSGRNNNALRDYQNQLMLLERQNKERLEFARNTGNSDSNPLSNGMMFAGQNQYSNSN QNQNQLPPNQQQPTPATFHPPPPPTTANGPQGQFNQKPSPATSNNSPALGNKSSPAMG NKKSKKESNSKKGKKANSNASTTANNKTSGQTTPNMSQPPSAGTEPKQPQPTEQMRQL QDKQQRPGSNTPSMGKKDFQPLTPRSEPISGETTKKKRKSGKLNDNNENSNGNSPKKQ AKTNANSKNLDPIIKEEENGVLSLKKESSTSLQDQDLDLNPPLAPTQATAMSNTFNDD PFDVHLLDTQHHHQQNSNNSNHNRGQNLSNGSNNLSVSGPGMGMNNSVFGDSTHAFDI NFNIDSLDDIWTTTGPGGDITGTGSGSGGAGGTDDDNFMGMNWAADPIENGD" misc_feature 28..99 /gene="FLO8" /locus_tag="CAALFM_C604350CA" /note="Region: LisH; pfam08513" /db_xref="CDD:462501" ORIGIN 1 atggttccca acacaactaa acaggtttta aactcgttga ttttggattt tttggtcaaa 61 catcaatttc aagatacagc aaaagcattt tctaaagaaa gtcccaactt gccttctatt 121 cctcctttga tggattgttc tcaaggattt ttattggaat ggtggcaagt tttctttgat 181 ttatttcaag tcagatatgg agacggtaac agtaataata accctaacaa caagctttat 241 catgattatc tcagagtcca agaaactcaa aaacatcttt tcagtcaact tcctctcata 301 cagcagcagc aacaacaaca acatcacttt caacaacaac aacaacaaca agggcaacag 361 ggacagcctt tcctgcagca acagcaaaga ggaatcggtg ttgctagtgg tatgcaaaat 421 caacaacatc aatttgcccc acagcatcaa ggccaacctc aaggaccagg tcaaacacct 481 caaccgccag gttctgcaac taacgctaat ttccctatca atatgccacc aaatctgaat 541 cctcaacaac aaatgttccc cattaatcaa caatttgctc agatgccaaa tggtcaaaat 601 cagccttcaa tggaacaaca acaaagaatg gcaatgatga tgaaacaaca agcaatggct 661 gcacaaagac aacaaatccc aatgaatggt ttagatccac aacaacaaca gcaaatgatg 721 aatgctgtag gtggtggacc tggtaatttg aatttgcaac aacaactatt tttacaacaa 781 caacagcagc agcagcagca acccaaaact actttccagc aacaagcaca aaatcaaatg 841 aacaatttgc gtcaacaagc tgcaatggtt gctcagcagc agcaacagca acaacaacag 901 caacaacaac agggtcagtt gcaaggcaat ttggcatcag caatgggtga ttcatctctg 961 aagaataact ctcctgttgg tgcaagatca aatcaacagc tgactccaca acaaaatgct 1021 gcaccagctc cactgccaca tccttctcaa caaggtcaag cacaagctca acataatttc 1081 cagagccaac aacaacaaca acaacagcaa atgactaaga tggctgggtc tcaaggaatg 1141 aaaaagaatg gtcagatgtc aaacggcact agtaataaca gtagtggcag aaacaataat 1201 gctctacgag attatcaaaa tcaattaatg ttattagaaa gacagaataa agagagatta 1261 gaatttgcta gaaacactgg taattccgac tccaacccat tgagtaatgg aatgatgttt 1321 gccggtcaaa atcaatattc aaattcaaat caaaatcaaa atcaacttcc tcctaatcaa 1381 caacaaccaa ctccagcaac tttccaccca ccacctccgc caacaactgc aaatggtcct 1441 cagggacaat ttaatcaaaa accatcacct gcaacgtcaa acaattcacc tgcattaggc 1501 aataaatcat caccagcaat gggcaataag aaatcgaaga aagaatccaa tagtaaaaag 1561 ggtaaaaagg cgaattcaaa tgcttctaca acagcaaaca acaaaacatc tggacaaaca 1621 acaccaaaca tgtcacaacc tcctagtgct ggcacggagc caaagcagcc tcaaccaaca 1681 gagcaaatgc gtcaattaca agacaagcaa cagcgtccag gttcaaatac tccaagtatg 1741 ggaaagaagg atttccagcc attgacacct cgctctgaac caattagtgg tgaaactacg 1801 aaaaagaagc gtaaatcagg taaattgaat gacaataatg aaaatagtaa tggcaattct 1861 ccaaagaagc aagccaaaac caatgcaaac tccaaaaact tagatcctat aataaaagaa 1921 gaagagaatg gagtattatc tttgaagaaa gaatcttcaa cttcattgca agatcaagat 1981 ctagatttaa accccccatt ggcaccaact caagccactg ctatgtccaa tacatttaac 2041 gacgatccat ttgatgttca tttattagat acacaacatc atcaccaaca aaatagcaac 2101 aacagcaatc ataatcgtgg gcaaaatctt tcaaatggaa gtaataatct cagtgtaagt 2161 ggcccaggaa tgggaatgaa taatctggta tttggtgatt cgactcatgc atttgacatt 2221 aatttcaaca ttgatagtct tgatgatata tggacaacta ctggaccagg aggtgatatt 2281 actggcactg gttcgggttc aggaggtgct ggcggtaccg atgatgataa tttcatggga 2341 atgaattggg ctgcagatcc aattgaaaat ggcgattag