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LOCUS XM_707012 1560 bp mRNA linear PLN 18-APR-2022 alpha-1,3-mannosyltransferase (CAALFM_C604340WA), partial mRNA. ACCESSION XM_707012 VERSION XM_707012.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1560) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1560) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1560) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1560) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1560) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1560) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707012.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1560 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1560 /locus_tag="CAALFM_C604340WA" /db_xref="GeneID:3646291" CDS 1..1560 /locus_tag="CAALFM_C604340WA" /note="Dolichol-P-Man dependent alpha(1-3) mannosyltransferase; role in the synthesis of dolichol-linked oligosaccharide donor for N-linked glycosylation of proteins; rat catheter biofilm repressed" /codon_start=1 /transl_table=12 /product="dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichol alpha-1,3-mannosyltransferase" /protein_id="XP_712105.2" /db_xref="CGD:CAL0000175383" /db_xref="GeneID:3646291" /translation="MPIVQESPKEVDTVLKNQSTNASTNTNTNKQQFRESPEFTLSNV LDDIKQGIIAFLINPKVTIIVYPIIICLSSILTKIVINKISYTEIDFITYMQQIKLIN QGIIKYSEIEGDSGPIVYPGGFVQIYQFIQWLISSSSSSSSSTGEEILSYDVREAQYI FSYLFTTSIIFNCLIYINLINIPPWTIYLFLLSKRLVSIYVLRLFNDCWTTLAILGVI LILQQASTNITEDWLVYLLVILASDLYSIAISIKMNALLYFPGFIIIVYFLLDESLIK STSVLIVMIFIQIIMGWQFLLPLELFNNDVDVRRMASIIRWDYINQAFNFKRKFLYEW TVNWKFLSIETFTSDGFAKLLLLLHVFTLLVFIITRFLNSRITGKSITSLIYQIVLPF SSSSSSSKSSSSSNGNNSNLIKNPQSGPQLIFIIMSITNLIGILFARSLHYQFLSWYA WSLPGLLYLNFPIYFALPIWFVHEWCWNVFPSNSISSITLVSILSLIIGATWWNFDHW XPTISQFIIYF" misc_feature 199..1461 /locus_tag="CAALFM_C604340WA" /note="ALG3 protein; Region: ALG3; pfam05208" /db_xref="CDD:461587" ORIGIN 1 atgccaattg ttcaagaatc accaaaagaa gtggatactg ttttaaaaaa tcagtcaacc 61 aatgcaagca caaacacaaa cacaaataaa caacaatttc gagaatcacc agaatttaca 121 ttatcaaatg tattagacga tatcaaacaa ggtataattg cctttcttat taatcccaaa 181 gtaacaatta ttgtatatcc tataatcata tgtttaagtt ctatattaac caaaattgtc 241 attaataaaa tttcatatac tgaaattgat tttattactt atatgcaaca aattaaatta 301 attaatcaag gtataattaa atatagtgaa attgaaggag attcaggacc aattgtatat 361 cctggtgggt ttgtccaaat ttatcaattt attcaatggt taatcagtag tagtagtagc 421 agtagtagta gtactgggga ggaaatattg tcttatgatg ttagagaagc acaatatatt 481 ttcagttatt tatttactac tagtataatt ttcaattgtt tgatatatat taatttaatt 541 aatatcccac catggacaat atatttattt ttgttgagta aacgattggt atcgatttat 601 gttttacgat tatttaatga ttgttggaca actttagcta tattgggagt gattttaata 661 ttacaacaag ctagtactaa catcacggaa gattggttgg tatatttatt ggtgatattg 721 gcaagtgatt tatatagtat tgccatatcg ataaaaatga atgcattatt atattttcct 781 gggtttatca taattgttta tttcttattg gatgaaagtt taattaaatc aacaagtgtt 841 ttaatagtga tgatatttat ccaaattata atgggttggc aatttttatt accattggaa 901 ttgtttaata atgatgtgga tgttagaaga atggcatcga ttataagatg ggattatatt 961 aatcaagctt tcaattttaa acgaaaattc ttatatgaat ggaccgtaaa ttggaaattt 1021 ttatcaattg aaactttcac atcagatgga tttgctaaat tattattgtt attacatgtt 1081 ttcaccctct tggttttcat tatcaccaga tttttgaatt ctcgtatcac aggcaaatca 1141 atcactagtt taatttatca aattgtgtta ccattttctt cttcttcttc ttcttctaaa 1201 tcatcatcat catcaaatgg taataattca aacttgatta aaaatcctca atcaggtcca 1261 caattaattt tcattattat gtcaattact aatttaattg gtattttatt tgctagatct 1321 ttacattatc aatttttaag ttggtatgct tggtcattac caggattatt atatttgaat 1381 ttcccaattt attttgcctt gccaatttgg tttgttcatg aatggtgttg gaatgttttc 1441 cctagtaatt caattagttc aattacatta gttagtattt tatcattgat tattggtgca 1501 acttggtgga attttgatca ttggkttccc accatcagtc aatttatcat ctacttctaa