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LOCUS XM_707011 2067 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_707011 VERSION XM_707011.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2067) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2067) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2067) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2067) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2067) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2067) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_707011.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2067 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2067 /gene="NOP8" /locus_tag="CAALFM_C604330WA" /db_xref="GeneID:3646290" CDS 1..2067 /gene="NOP8" /locus_tag="CAALFM_C604330WA" /note="Ortholog of S. cereviiae Nop8; has a role in ribosomal large subunit biogenesis; rat catheter and Spider biofilm induced" /codon_start=1 /transl_table=12 /product="Nop8p" /protein_id="XP_712104.2" /db_xref="CGD:CAL0000183807" /db_xref="GeneID:3646290" /translation="MATIENNKESPIKDFRVYIGNISPKLKENEQSLTTRIAKYGIIK SPLEFHTKPLQLYYFAYVTISTTDSEFNKLKKSLNGVLFMGMKLIISLAKPNYLERWK KSNSKDKDKEGGRSNNNQIKQLEQLRRDKIVESRLEKIQEYKTNYPTNKFTSNLITCY NAGFNQPEISISEHTTNNISANTKNPPPKHRLIGSKSYGALTQPNKFNQNRFLYRSGK GIVIRGVHRKTPRSNLKLKQQTLRILINGELKIFKNYKTKLWGIEKNKTIRDLTWKYI NGEWRSGDDHIIEKVTCGISSGQQAENYSKDNIIIDKEDNSGNKLSSIDNDNDNDNDK EEIDKNKSILASMFDSYDFDKPIELEETGNEIHGSGGKVATAAADDDDDDDDEIEVDS KGRKKAKHYDYEIEGKISEDEQEEEENDAEKINTVDIKSANQIIENYKQSSSFVPTKE TYYDEDDEGNEIELDEFNNKYTTEAIKSNYDKDHNDIEVEREDNDDDEEEEFIPTFGA PKPNTNNTETLRALFNPTTSNTTIQPTSIADNGSFKLGLQDDDEDLDTDKQLDNLKQQ ELYKKLQKQRQEQQQQQQEEETNNQQLLSSNKKFGLFWCHFDSPFLSTQSQFSKLGGG GGNGKIKLPGEEEEEVEGKDDKDQDEDEESLYEKWFWSMRGDISRECKRRKRDLLRTI RKKKKN" misc_feature 46..282 /gene="NOP8" /locus_tag="CAALFM_C604330WA" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" ORIGIN 1 atggcaacaa tagaaaacaa taaggagtca ccgataaaag actttcgagt atatattgga 61 aatatatctc ctaaacttaa agaaaatgaa caaagtttaa ctactagaat cgccaaatat 121 ggaatcatca aatcaccctt agaatttcat actaaacctt tacaattata ttattttgct 181 tatgtgacta tatctactac tgattctgaa tttaataaat taaagaaatc tttgaatgga 241 gttttattta tggggatgaa attgattatt tctttagcta aacccaatta tttagaaaga 301 tggaaaaaat caaattccaa agacaaagac aaggaaggag gacgtagtaa taataatcaa 361 attaaacaac ttgaacaatt acgtcgtgat aaaattgttg aatctagatt agaaaaaatc 421 caagaatata aaacaaatta tccaactaat aaattcactt caaatttaat tacttgttat 481 aatgctggat ttaatcaacc agaaatatct attctggaac atacaacaaa caacatttca 541 gcaaacacga aaaatccacc acctaaacat cgattaattg gatcaaaatc atatggtgca 601 ttaactcaac caaataaatt caatcaaaat agatttttat atcgatcagg taaagggatt 661 gttataagag gagttcatcg taaaactccc agactgaatt taaaattaaa acaacaaact 721 ttaagaattt taattaatgg agaattgaaa atttttaaaa attataaaac taaattatgg 781 gggattgaaa aaaataaaac tattagagat ttgacttgga aatatattaa tggtgaatgg 841 agatctggtg atgatcatat aattgaaaaa gttacatgtg gtatatcttc tggacaacaa 901 gcagaaaatt atagtaaaga taatattata atagataaag aagacaatag tggtaataag 961 ttatctagta tcgataatga taatgacaat gacaatgaca aggaagaaat tgacaagaat 1021 aaatctatat tagcatcaat gtttgattca tacgattttg ataaaccaat agaattagaa 1081 gagactggaa acgaaattca tggtagtggt ggtaaagttg ctactgctgc tgctgatgat 1141 gatgatgatg atgatgatga aattgaagta gattctaaag gcagaaagaa agcaaaacat 1201 tacgattatg agattgaagg gaaaatatca gaggatgaac aagaagaaga agaaaatgat 1261 gctgaaaaaa ttaataccgt tgatattaaa tcagctaatc aaattattga aaattataaa 1321 caatcatcaa gttttgtgcc tactaaagaa acatactatg acgaagatga cgaaggtaat 1381 gaaattgaat tagatgaatt taataacaag tataccactg aagcaattaa aagtaattat 1441 gataaagatc ataacgatat agaggtggag agggaggata atgatgatga tgaagaagaa 1501 gaatttattc caacgtttgg tgctccaaaa ccaaatacaa ataatactga aactttaaga 1561 gcattattta atccaactac aagtaacaca actattcaac caacatcaat agcagataat 1621 ggatcattta aacttggttt acaagatgat gatgaagatc ttgatactga taaacaattg 1681 gataatctta aacaacaaga attatacaaa aaattacaaa agcaacgtca agaacaacaa 1741 caacaacaac aagaagaaga aaccaataat caacaattat tatcaagtaa taaaaaattt 1801 ggattatttt ggtgtcattt tgattcacca tttttatcta ctcaatcaca atttagtaaa 1861 ttaggtggtg gtggtggtaa tgggaaaata aaattaccag gtgaagaaga agaagaagta 1921 gaaggaaaag atgataaaga tcaagatgaa gatgaagaat cattatatga aaaatggttt 1981 tggagtatga gaggtgatat ttcacgtgaa tgtaaacgtc gtaaacgtga tttattaaga 2041 accatacgta aaaagaagaa gaattga