Candida albicans SC5314 Pex11p (PEX11), partial mRNA.

LOCUS       XM_707009                738 bp    mRNA    linear   PLN 18-APR-2022
ACCESSION   XM_707009
VERSION     XM_707009.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 738)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 738)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 738)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 738)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 738)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 738)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            On Dec 8, 2016 this sequence version replaced XM_707009.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>738
                     /gene="PEX11"
                     /locus_tag="CAALFM_C604310WA"
                     /db_xref="GeneID:3646288"
     CDS             1..738
                     /gene="PEX11"
                     /locus_tag="CAALFM_C604310WA"
                     /note="Putative peroxisomal membrane protein; role in
                     fatty acid oxidation; expression is Tac1-regulated;
                     Hms1p-dependent induction by geldamycin; Spider biofilm
                     induced"
                     /codon_start=1
                     /transl_table=12
                     /product="Pex11p"
                     /protein_id="XP_712102.2"
                     /db_xref="CGD:CAL0000200064"
                     /db_xref="GeneID:3646288"
                     /translation="MVVDTLIYHPTLSKLIKFWDSTPKREKTFRLLSYLSRFLGYYAY
                     KKGYSKETIELWSNLKAHFTFIRKAMRFFKPINHLQLASKAFDNKLMDPILQFTTIIR
                     NLGYAGYLTIDAIVFFKLLGIIDKKKYPNLGKYASRFWLLGLIAGLINSLRIIYSLNS
                     YENDQKNTQDEKVKVKETETETETKADTVAINQKLYQAKRKLIWDLLDTFIALNSLDI
                     LHFTEGDVGLAGVITSLLGLQDLWKAT"
     misc_feature    34..726
                     /gene="PEX11"
                     /locus_tag="CAALFM_C604310WA"
                     /note="Peroxisomal biogenesis factor 11 (PEX11); Region:
                     PEX11; pfam05648"
                     /db_xref="CDD:398979"
ORIGIN      
        1 atggttgttg acacattgat ttatcatcct acattaagta aattaattaa attttgggat
       61 tctactccta aaagagagaa aacttttaga ttattatcat atttatcaag atttcttggt
      121 tattatgctt ataaaaaagg ttattctaaa gaaacaattg aattgtggag taatttaaaa
      181 gctcatttca catttattag aaaagccatg agatttttta aaccaattaa tcatttacaa
      241 ttggcttcta aagcttttga taataaatta atggatccaa ttttacaatt tactactatt
      301 attagaaatt tgggttatgc tggttattta actattgatg ctattgtatt tttcaaatta
      361 ttaggaatta ttgataaaaa gaaatatcct aatttaggta aatatgcttc aagattttgg
      421 ttacttggtt taattgctgg attaataaat tctttaagaa taatttatag tttgaattct
      481 tatgaaaatg atcaaaaaaa cacccaagat gaaaaggtaa aggtaaagga aactgaaact
      541 gaaactgaaa ctaaagctga tactgttgct attaatcaaa aattatatca agctaaaaga
      601 aaattgattt gggatttatt agatactttt attgcattga attctttaga tatcttgcat
      661 ttcactgaag gtgatgttgg tttagctggg gttataactt cattattagg tttacaagat
      721 ttatggaaag ccacttga