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LOCUS XM_706997 2253 bp mRNA linear PLN 18-APR-2022 transporter (ATM1), partial mRNA. ACCESSION XM_706997 VERSION XM_706997.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2253) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2253) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2253) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2253) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2253) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2253) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_706997.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2253 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2253 /gene="ATM1" /locus_tag="CAALFM_C604210CA" /db_xref="GeneID:3646284" CDS 1..2253 /gene="ATM1" /locus_tag="CAALFM_C604210CA" /note="Member of MDR subfamily of ABC family; ortholog of S. cerevisiae ABC transporter, Atm1; induced in low iron; induced by nitric oxide independent of Yhb1" /codon_start=1 /transl_table=12 /product="ATP-binding cassette Fe/S cluster precursor transporter" /protein_id="XP_712090.2" /db_xref="CGD:CAL0000178930" /db_xref="GeneID:3646284" /translation="MFIRNVKLIKPSPVRFISPIPFSFPISRSIKISSIRYFTNKSTS NFKSTSSSSSLKSTSTSTSTSTSKTTPKTLSKPPPKVKPPIQDNDTTSSGSSSSENSE SFMLKSLFKTIWPKNNLNFKIRVIIALSLLVGAKILNVQVPFYFKQIIDTMNIDWTNE VGVFSTVIGSLILAYGGARFGAVLFGELRNAIFASVAQSAIRRVAYNTFVKLLNMDLQ FHLSRQTGGLTRAIDRGTKGISYVLSAMVFHIIPITLEISIVCGILTYNYGASFAAMT FVTMLAYSIFTIQTTAWRTKFRRQANNADNQAANVALDSLINYESVKIFNNELYQASK YDKALMKYQQSSVKIATSLAFLNSGQNFIFTSALTAMMYMGCQGVYTGELTVGDLVLI NQLVFQLSVPLNFLGSVYRELKQSLLDMENLFQLQNQPIRIKEIPNAPPLKLNNNNNN NNNNNNNNNNSLPGEIRFENVSFGYHPDRPILNNASFTIPAGQKVAIVGPSGSGKSTI LRLIFRFYDINQGRILIDGQDISKVSLESLRKLIGIVPQETPLFNDTILENIRYGRLD ASDEEIYRVINQVQLNKLIDDLPDGVQTIVGERGMMISGGEKQRLAMARLLLKRAPIT FFDEATSALDTHTEQALLKTIRSVFKQQHQTNVSIAHRLRTIADADKIIVLNKGQVVE EGTHWQLLNEQPNSLYAQLWNIQENLDIEKELLQGDEEEEELTEKLKLDKQELEQEAK LFNSQTFEKK" misc_feature 340..2151 /gene="ATM1" /locus_tag="CAALFM_C604210CA" /note="ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]; Region: ATM1; COG5265" /db_xref="CDD:444078" ORIGIN 1 atgtttatta gaaatgttaa attgataaaa ccatctcccg tgaggtttat atcaccaata 61 ccttttagtt ttcctatttc tagatcaatt aaaatatcaa gtattagata tttcactaat 121 aaatcaactt ctaatttcaa atcaacttca tcatcatcat cattaaaatc gacttcgact 181 tcgacttcga cttcgacttc aaagacaaca cccaaaacat tactgaaacc tccacccaag 241 gtaaaaccac caatacaaga taatgatact actagtagtg gtagtagtag tagcgaaaat 301 agtgaatcat ttatgttgaa atcattattt aaaaccattt ggccgaaaaa taatcttaat 361 ttcaaaattc gagtaatcat tgccttatca ttattagttg gtgccaaaat tttaaatgtt 421 caagttccat tttattttaa acaaattatt gatacgatga atattgattg gactaatgaa 481 gtcggggtat ttctgaccgt tataggaagt ttaattttag cttatggtgg agctcgattt 541 ggtgctgtat tatttggaga attacgtaat gccatttttg ctagtgttgc ccaactggca 601 attcgtcgag ttgcttataa tacatttgtt aaattattaa atatggattt acaatttcat 661 ttaagtcgac aaactggtgg attaacaaga gctattgata gagggactaa aggtataagt 721 tatgttttat cagctatggt atttcatata atcccaataa ctttagaaat atcgattgtt 781 tgtggaattt tgacttataa ttatggtgct tcatttgctg ctatgacatt tgtgacaatg 841 ttggcatatt caattttcac tattcaaaca acagcttgga gaactaaatt tagacgtcaa 901 gctaataatg ccgataacca agctgctaat gtagcattag attcattaat taattatgaa 961 agtgtcaaaa ttttcaataa tgaattatat caagcgtcaa aatatgataa agcattaatg 1021 aaatatcaac aatcaagtgt taaaatagct actagtttag catttcttaa tagtggacaa 1081 aattttattt tcaccctggc attaaccgca atgatgtata tgggatgtca aggtgtttat 1141 actggtgaat taaccgttgg tgatttagta ttaattaatc aattggtatt tcaattgagt 1201 gtgccattaa atttccttgg ttcagtttat cgagaattaa aacaatcttt attagatatg 1261 gaaaatttgt ttcaattaca aaatcaacct atcagaatta aagaaatccc caatgctcca 1321 ccccttaagt taaacaacaa caacaacaac aacaacaaca acaacaacaa caacaacaat 1381 agtttacctg gagaaattag atttgaaaat gtactgtttg gttatcatcc agatcgtcca 1441 attttaaata atgctagttt tactattcct gcaggacaaa aagttgctat tgttggacct 1501 tcagggagtg gtaaatcaac gatattacga ttaatattcc gattttatga tataaatcaa 1561 ggtcgtattt taattgatgg acaagatatt agtaaagttc tgttagaatc attacgtaaa 1621 ttaattggga ttgtgcctca agaaacccca ttatttaatg atacaatatt agaaaatatt 1681 cgttatggta gattagatgc tagtgatgaa gaaatatatc gagtgattaa tcaagttcaa 1741 ttaaataaat taattgatga tttacccgat ggtgttcaaa ctattgttgg agaacgaggg 1801 atgatgattt ctggtggtga aaaacaacga ttagccatgg caagattatt attaaaacgg 1861 gctccaatta catttttcga tgaagcaaca tcagctttag atactcatac tgaacaagca 1921 ttattgaaaa ccattagact ggtttttaaa caacaacatc aaactaatgt aagtattgct 1981 catagattaa gaactattgc tgatgctgat aagataattg ttttgaacaa aggacaagta 2041 gttgaagaag gaactcattg gcaattatta aatgaacaac ctaattcatt gtatgctcaa 2101 ttatggaata ttcaagaaaa tttagatatt gaaaaggaat tattacaagg tgacgaggaa 2161 gaagaggaat taacagagaa attgaaactt gataaacaag aattggaaca agaagcaaaa 2221 ttattcaata gtcaaacttt tgaaaagaag tag