Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_706228 3324 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_706228 VERSION XM_706228.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 3324) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 3324) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 3324) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 3324) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 3324) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 3324) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_706228.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..3324 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>3324 /gene="SEC8" /locus_tag="CAALFM_C600780WA" /db_xref="GeneID:3647078" CDS 1..3324 /gene="SEC8" /locus_tag="CAALFM_C600780WA" /note="Predicted subunit of the exocyst complex, involved in exocytosis; localizes to a crescent on the surface of the hyphal tip" /codon_start=1 /transl_table=12 /product="exocyst subunit" /protein_id="XP_711320.2" /db_xref="CGD:CAL0000180162" /db_xref="GeneID:3647078" /translation="MSIRRYSGNSPRINDYDSRTVDESLYSLKEVYNTIKYDWPQMLR EDANPIEMAVALLDDTSVGLAHRLQEFNMLKESSEQALRSVVNEHYDLFNKSMGSYNT LLSTMKNSQEDSLEIKNFLEYSNKEVHDRSAVLGELSSASAKYSEMIEVLDAMAEMNE IPGKIDQLVIDKKIHEVYDVISEGYKTAEKYNLWSLPAMNGIKTYLEEQSNKLFDMII DELQNEIYLKYNRNPQEGAIAWQNIIHSSNPQLTSFVTLLDSKNLEQFIFNSANLDIS EVVDFLTSPVKNFIVNQLPDLHAHNSKNDGVIDYKILLDSTSNPNTESFYYIYMLLLT ASKLNRLNQAVEVLLDTNQSELHGLINRTTEAVKSRNGHALSKLSKMQHLDHGSLFDV IVHGSFSDSAVVLLQDLFGSIFIRCLATFQRHKVITQIVTLLQEGKAPSTPKAVAEST PTFDSPQMGRPDTFHARNLFTIWKTIQKELKALMLNYIYDDHNYKLHSLADTTGATNR NKISNALGKKELFKFEDVTYNPSNKTTKEILDVLADVFPGYSISDDNNNGAIIETATP YVKHESFNATVEVLVPKNLFNMRIILEFFLIFIDGSQRIFFDFEDEKTRGVHARTSFH FFEDFMKISFLSYLRNTIEFNFGEQVGGAYSMKIEQAMPVNSGLKLDLISLSQDSNFK ILGNAVSNVESNLIIYENAYNFKKMFLELCLILNTSLSYRENFSGAVLKTLENFSNEY NKLYQELLSTGEGTNIVRPPSRVSKWMKIPVLTEISGKILQRGVQGETANELQELIES ESKVVLHDETVTHQEDLLDHEAYAQIVYLLLTTTWILSWLPLVKKESNYSIYDDEQNK TIKVSTVDKLRYNWSFLENGRQAINFTPDGTDIVQYNIYLALNSEKIGEFNNIIHNFE SIRDKTLLALRYELRCKAVYFVTMSFKHVDWCPVTEPGDADHFIVNLNQEIFAMDNKL SKTVSDIERESIFLGFSQFLNDLIITRSKAVRKINSNGIKRILLNISTVQQMLRNLSS NPETIDFTKASEYFEMFTMNEFNLLKFIKSKRDNYTKDAYHTLARLIYSEKLADGNGS SFNKGKYNDLIKKIDGIFD" misc_feature 79..501 /gene="SEC8" /locus_tag="CAALFM_C600780WA" /note="Sec8 exocyst complex component specific domain; Region: Sec8_exocyst; pfam04048" /db_xref="CDD:367782" ORIGIN 1 atgtcgataa gaagatattc tggtaattcc cctaggatca atgattatga tctgcgcaca 61 gttgacgaat ccctttattc cttgaaagaa gtctacaata caataaaata tgattggcct 121 caaatgcttc gagaagatgc caatccaatt gaaatggcag tggcattgtt agatgatact 181 tcagttgggt tagcccatag attacaagaa ttcaacatgt tgaaagagag ttccgaacaa 241 gctttacgta gtgtggtgaa cgaacattac gatttattca acaaaagtat gggatcatat 301 aataccttac tatctacaat gaaaaactct caggaagact ctttggaaat caagaacttt 361 ttggaatact ccaataaaga agtgcacgat cgatcagcag tgttgggtga attgtcactg 421 gcttctgcca agtattcaga gatgattgaa gtattggatg caatggctga aatgaacgaa 481 atacctggga aaattgatca attggtcatt gacaaaaaga tacacgaggt ttacgacgtg 541 atttccgaag gatacaaaac ggcagaaaaa tataatttgt ggtcattacc ggcaatgaat 601 gggataaaaa catatcttga agaacagtct aacaaactat ttgatatgat tattgatgaa 661 ctacagaatg agatctattt aaaatacaac agaaacccac aagaaggagc cattgcatgg 721 cagaatatta ttcattccag taatccacaa ttgacttcct ttgtgacttt gttagatctg 781 aagaatttag aacaatttat tttcaattca gcaaatttgg atatatcgga agtggtcgat 841 tttttgactt ctccagtgaa aaattttata gttaatcaat tgcctgacct ccatgctcat 901 aatagtaaga atgatggagt catcgattac aaaatcttgt tagactcaac tctgaatcca 961 aacacagagt cattctatta catttatatg cttttgctta cagcatccaa actcaacagg 1021 ttgaatcaag cagttgaagt tttacttgac actaatcaac tggaattgca tggtctaatt 1081 aacagaacca cagaggcagt taagctgcga aatgggcatg cgttatcgaa gttatctaaa 1141 atgcagcacc ttgatcatgg ctcattgttt gacgttattg tgcatggttc atttagtgat 1201 tcggctgttg ttcttttgca agacttgttt ggatcaatct ttatcaggtg tttggctact 1261 ttccaaagac ataaagtaat aactcaaatt gtgacattat tgcaagaagg aaaagcgccg 1321 tcaacaccaa aggctgttgc tgaaagcaca cctacttttg atagtcctca aatggggaga 1381 ccggatactt tccatgcacg taatttgttt acaatttgga agacaatcca aaaggagttg 1441 aaggcattaa tgttgaatta catttatgac gaccacaatt ataagttaca ttctttggca 1501 gacactactg gtgccaccaa tcgtaataag atttcaaatg cattagggaa aaaagagttg 1561 ttcaaatttg aagatgtgac ttataaccct tctaataaaa caacaaaaga aattcttgat 1621 gttttggccg atgtgtttcc cggatatagt atttcggacg ataataacaa tggagctatt 1681 atagaaaccg ctactccgta tgtcaaacat gagtcattta atgcaactgt tgaagtgttg 1741 gttcccaaga atttgttcaa tatgagaatc attttagaat tttttttaat tttcattgat 1801 gggtcacaaa gaattttttt tgactttgaa gatgaaaaaa ccagaggtgt tcatgccaga 1861 acatcatttc atttctttga ggattttatg aaaatatcct ttttgtcata tttacgaaac 1921 actattgagt tcaattttgg agaacaagtt ggtggtgctt attctatgaa aattgaacaa 1981 gcaatgccgg ttaattcagg attaaaacta gatttaatat ctttaagtca agattcaaat 2041 ttcaaaattc ttggtaatgc agttagcaat gttgaatcca atttgatcat ttatgaaaat 2101 gcatataatt tcaaaaaaat gtttcttgaa ttgtgtttaa tattaaacac ttcattgtca 2161 tatcgtgaga atttctcagg ggccgtctta aagacgttag agaatttttc taatgagtac 2221 aacaagttgt atcaagagtt attgtccact ggtgaaggta caaacattgt gcgaccacct 2281 ctgagagtaa gtaaatggat gaagatacct gtgttaactg agatcagtgg taaaattctt 2341 caacgtggag tacaaggtga aactgctaac gaattacaag aactaattga atcagaatct 2401 aaagttgttt tacatgatga aaccgtgaca caccaagaag atttgttaga tcacgaggca 2461 tatgctcaga ttgtgtattt gttgttaact accacctgga tactttcttg gttacctttg 2521 gttaaaaagg aatccaatta tagcatttat gatgatgagc aaaacaagac tatcaaagtt 2581 tcgacagtgg acaaattaag atacaattgg tctttcttag aaaacggaag acaggcaatc 2641 aactttaccc cagatggaac tgatattgta caatataaca tttaccttgc cttgaattca 2701 gaaaaaattg gtgagtttaa taatattatc cataactttg aatcgattag agacaaaacc 2761 ttgttggcct tgagatatga attgaggtgt aaagcagtat attttgtcac tatgtctttt 2821 aaacacgttg attggtgtcc tgtaactgaa ccaggcgatg ctgatcattt tattgtcaat 2881 ttgaatcaag aaatatttgc catggataat aagttatcta aaactgttag tgacattgaa 2941 cgagaaagta tatttcttgg gttttctcaa ttccttaatg atttgataat cactagatcc 3001 aaagctgtga gaaagattaa tagcaatggt attaagagaa tattgttaaa catttcaaca 3061 gtacaacaaa tgttaagaaa cttatcgtct aatccagaga caattgattt cacaaaggca 3121 tctgaatatt ttgaaatgtt tactatgaat gaattcaatt tacttaaatt tatcaagagc 3181 aaacgagaca actacactaa agacgcatac catacattgg caagattgat ttatagtgaa 3241 aaattggctg atggtaatgg ttcactgttc aataaaggga aatataatga tttgattaag 3301 aaaattgacg gaatatttga ttag