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LOCUS XM_706166 1845 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_706166 VERSION XM_706166.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1845) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1845) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1845) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1845) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1845) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1845) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1845 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1845 /locus_tag="CAALFM_C600540WA" /db_xref="GeneID:3647146" CDS 1..1845 /locus_tag="CAALFM_C600540WA" /note="Ortholog(s) have crossover junction endodeoxyribonuclease activity, enzyme inhibitor activity" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_711258.1" /db_xref="CGD:CAL0000174024" /db_xref="GeneID:3647146" /translation="MSVVNDDFKPLLIQWVEEEAINATKRGSKMVDLYNKILFQLRGY ELPICDLKTLKSIKYVGDKTANQLRKKIAKHCKENELTLPRGFMDVAEKHRLDLEESN LTSSTSTIKTTNKRAKTSSKSKPKYVPKHRSGGFAILIALYLYDKDRNGMTKERIIAG ATPYCDRSFSNNAASKEFYSAWSSAKTLENHNLISTTGRSPKIYFLTDEGVSLAQQLK TAIGLSSPPEGSKKNDRNMIMEQSFDNGIRLDTSFELSSPAGRAMLSSSPIRRISNPV HSNRAIQKMLEKELRNGETPPSSQHDAGNRIYDGIKYEVWRKEDYEVIVYMDNREIRS RADRDHFQTRLQTLGVKCEVKPLSSGDVLWVGRNTSTGTEAVLNYLCERKRLDDLCDS IKDGRFQEQKNRMKKTGIKHCYYLVEDMVSYQDKVYDLMDSIQSSLTQTMTTARLYLR RFKDIDETTAFIASNTKVIENLKSNLIVIKPQDIKNQQDYLNILLKFRNKFEKTQPHQ DNPDYECVQLFSRFQDMLGKTNQMTVKEMFILMLMTIRGVSLEKAVVIQNRFPTPKSL LEYYHTEHATTDTNIKRDLMMNEFKDQIGNKKIGKALSEKIYNVWGKP" misc_feature 379..660 /locus_tag="CAALFM_C600540WA" /note="winged helix domain found in crossover junction endonuclease MUS81 and similar proteins; Region: WH_MUS81; cd21036" /db_xref="CDD:411029" misc_feature 550..573 /locus_tag="CAALFM_C600540WA" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:411029" misc_feature 958..1407 /locus_tag="CAALFM_C600540WA" /note="XPF-like nuclease domain of Mus81; Region: XPF_nuclease_Mus81; cd20074" /db_xref="CDD:410850" misc_feature order(982..984,991..993,1081..1083) /locus_tag="CAALFM_C600540WA" /note="Mg binding site [ion binding]; other site" /db_xref="CDD:410850" misc_feature order(1135..1137,1186..1188,1195..1200,1207..1209, 1234..1236,1240..1242,1303..1308,1315..1320,1324..1329, 1339..1353,1357..1359,1369..1371,1381..1383,1390..1395, 1402..1407) /locus_tag="CAALFM_C600540WA" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:410850" misc_feature order(1177..1182,1195..1197,1297..1299,1306..1311, 1318..1320) /locus_tag="CAALFM_C600540WA" /note="nucleic acid substrate binding site [nucleotide binding]; other site" /db_xref="CDD:410850" ORIGIN 1 atgtctgtcg tgaatgacga ttttaaacca ctactcatac aatgggttga agaagaggcc 61 ataaatgcca cgaaaagagg atcaaaaatg gtagatctat acaataaaat tctatttcaa 121 ctacgaggat acgaacttcc catatgtgat ttgaaaacat tgaaactgat taaatacgta 181 ggagataaaa cagccaatca attaagaaag aaaattgcta aacactgtaa agaaaatgaa 241 ttgacactac ctcgagggtt tatggatgtg gcagaaaagc atcgtttaga tttggaagaa 301 tccaacctta cactgtcaac ttcaaccatt aaaactacta acaagcgggc caaaacttcc 361 agcaagagca aaccaaaata tgttcccaaa cacagatcag gagggtttgc cattttaatt 421 gcattgtatc tttatgataa agatagaaat ggaatgacta aagaacgaat aattgcagga 481 gcaaccccat attgtgatcg ttcattcagt aataatgcag cttcaaaaga gttttattct 541 gcatggagct ctgccaaaac tttagagaat cataatttga tttcaactac tggaaggtca 601 ccgaagattt attttttgac cgacgaaggc gtgtcgttgg cacagcaatt aaagactgcc 661 attgggttat catctcctcc tgaaggtagt aaaaagaacg acagaaatat gataatggaa 721 cagtcattcg ataatggaat tcgactcgac acaagttttg agttatcatc accagcagga 781 cgtgcaatgt tgagtagctc gccaataaga agaataagta atcctgttca tagtaataga 841 gccattcaaa aaatgttaga aaaggaatta cgaaacggtg aaacgccgcc atcgctgcag 901 cacgatgctg gtaatagaat ttatgatggc attaagtatg aagtatggag aaaggaagat 961 tatgaagtga ttgtctatat ggacaaccgt gaaattagat cacgagctga cagggaccat 1021 tttcaaacca gattacaaac acttggtgtc aagtgtgaag tcaagccatt atcttcagga 1081 gatgtattat gggttggtag aaatacaagt acgggcactg aggctgtatt gaactatctt 1141 tgtgaaagaa aaagactaga tgatttatgt gattcaataa aagatggacg gttccaagaa 1201 caaaagaata gaatgaaaaa aactggcatc aagcattgtt attatcttgt tgaagatatg 1261 gtaagttatc aagacaaagt atacgacttg atggatagta tacagtcctc cttaacccaa 1321 acaatgacca cagcaagatt gtacttgaga cgatttaaag acatcgatga aacgacagcg 1381 tttattgcct ctaacactaa agttattgaa aatttaaaat caaacttgat tgtgatcaag 1441 ccccaagata taaaaaacca acaagattat ctaaatatac ttttaaaatt tagaaacaag 1501 tttgagaaaa ctcaacctca tcaggacaac ccagattatg aatgtgttca attgttttcg 1561 cgttttcaag atatgttggg caaaacaaac cagatgactg taaaggaaat gtttatattg 1621 atgttgatga caattcgggg agtatcacta gagaaggcag tggtaataca aaatcgattc 1681 ccaacaccaa aaagtttact tgaatattac catacagagc atgctactac tgacacgaat 1741 attaaaagag acttgatgat gaatgagttt aaggatcaaa tcggtaataa aaaaattggt 1801 aaagctttac tggaaaagat ttataatgtt tgggggaaac cttga