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LOCUS XM_706159 1572 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_706159 VERSION XM_706159.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1572) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1572) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1572) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1572) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1572) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1572) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_706159.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1572 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1572 /gene="SLY41" /locus_tag="CAALFM_C600590WA" /db_xref="GeneID:3647139" CDS 1..1572 /gene="SLY41" /locus_tag="CAALFM_C600590WA" /note="Protein involved in ER-to-Golgi transport; rat catheter and Spider biofilm induced" /codon_start=1 /transl_table=12 /product="Sly41p" /protein_id="XP_711251.2" /db_xref="CGD:CAL0000178160" /db_xref="GeneID:3647139" /translation="MYQHQDQTQHQYYQQYNSYNPSIEDLIASSDDKRYQNGGIGNSL QRPPVAGLPYISSQVNPNTSSANLSKLTSNINNYGYNNNNNSHIQLHTPPLSSNPSFT SFQNLNYPLSPLSKPTSPEPILSAASVTTSNFLASSFFSWLPPIDVKIVSFCIGWYLC SIISSNSTKLILNDFKFPVTLTQFQFSASFTFCLVFLNIVKVNPESISSKLPPGFIPS MTDTNRISLSEFITPTRLIIQTTLPMGMFQFIGHITSHKATSLIPVSIVHTIKSLSPI ITVLIYRFLFGKSYRMRTYVTLIPLCCGIMLTCYKKSHTSNQNNVPGAGSSVINNNLD KINTNNNYSTGLIFAFISMIIFVSQNIFAKKRLTVESTNAIPMNNKSSLRINSNKVDK LTILFYCSIIGFILTCPIYFVTEWMNYNAFGAISLLQLNSYVMSLVLLNGLSHFVQSL LAFQILGMVSPINYSIANILKRIFIILISFIWESKQFSNSQSIGLVITLFGLYCYDRW GTVSNSGSASNPGKY" misc_feature 541..1527 /gene="SLY41" /locus_tag="CAALFM_C600590WA" /note="Triose-phosphate Transporter family; Region: TPT; cl26744" /db_xref="CDD:474852" ORIGIN 1 atgtatcagc accaagatca aactcagcat cagtattacc aacagtataa ttcatacaac 61 ccgtccatag aggatttgat tgcctcatca gatgataaac ggtatcaaaa tggtggtatc 121 ggtaacctgt tacaaagacc tccagtagca ggtttacctt atatttcgtc acaagttaac 181 ccaaacactt catcagccaa cttatccaag ctaacaagca atattaacaa ctatgggtac 241 aacaacaaca acaacagcca cattcaatta cacacaccac cattatcttc aaacccatct 301 ttcacttcgt tccagaattt gaactaccca ttatcaccac tcagcaagcc aacgtcaccc 361 gaacctatac tatctgccgc atcagtaacc acaagcaact ttttagcgtc gtcttttttc 421 agttggttgc ctcctattga tgttaagatt gtttcgtttt gtattggttg gtatttatgc 481 tccattattt cgtcgaactc aacaaaattg attctaaatg atttcaagtt cccggtaaca 541 ttgactcaat ttcaattttc tgctagtttt actttttgtc tagtatttct taacatagtt 601 aaagtcaacc cagagagtat tagcagtaag ttacccccag gatttatacc gtcaatgact 661 gataccaaca gaatcagtct ttcagaattt atcacaccaa caagattgat tatacaaacc 721 actttgccca tgggtatgtt ccaatttatt ggccacataa caagtcacaa ggcaacttca 781 ttaatcccag tgtcaatcgt tcacacaata aaatcattaa gtccaattat cacagtattg 841 atttaccgat tcttatttgg aaaatcgtac aggatgagaa cctatgtcac tttaattcca 901 ttatgttgtg ggatcatgtt gacttgttat aaaaaaagcc atactagtaa tcaaaacaat 961 gtgccgggtg ctggtagcag tgttattaat aataatcttg acaagatcaa cactaacaat 1021 aattattcta ctggcttaat atttgcattt atttccatga ttatttttgt cagtcaaaac 1081 atttttgcca aaaaaagatt aacggttgaa tctactaatg ctattccaat gaacaacaaa 1141 tcatcgctca gaatcaattc caataaagta gataaattaa ctatattgtt ttactgttct 1201 ataattggat ttattttgac atgcccaatt tattttgtca ctgaatggat gaattataat 1261 gcctttggcg ccatatcact tttgcaactc aattcatatg tgatgagttt agttttattg 1321 aatggattga gtcattttgt acaatcattg ttagcattcc aaatactagg aatggttagt 1381 cctatcaact attccattgc caacatttta aagagaatat ttattatttt gatttcattt 1441 atttgggaac tgaaacaatt ctctaatagc caatcaatag ggttagttat cactttgttt 1501 gggttatact gttatgatag atggggcaca gtctcaaact caggcagtgc cagtaatcca 1561 ggaaaatact aa