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LOCUS XM_706154 1092 bp mRNA linear PLN 18-APR-2022 (CAALFM_C600640CA), partial mRNA. ACCESSION XM_706154 VERSION XM_706154.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1092) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1092) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1092) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1092) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1092) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1092) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_706154.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1092 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1092 /locus_tag="CAALFM_C600640CA" /db_xref="GeneID:3647134" CDS 1..1092 /locus_tag="CAALFM_C600640CA" /note="Putative TFIIH complex subunit; possibly an essential gene, disruptants not obtained by UAU1 method" /codon_start=1 /transl_table=12 /product="TFIIH/NER complex subunit" /protein_id="XP_711246.2" /db_xref="CGD:CAL0000195519" /db_xref="GeneID:3647134" /translation="MEAISDRLFNENANTIESGNDDPSLLTIILDLSMKGWYNIKEMI SIQDITKSLLVFLNGHLSLNNSNQVAFLVSSTMGSKFLYPDLTMVGNPNVSEHSEHFP DMYRSFKMVDQSVLQRLNEYIEEIIKFETGNEKKGFNCLTGAISMALTYTNRMLTLDQ SITTTTAAAMTASTLESTSNNNNTSGTSGSSSTSSSTSMKSRVLIVSANDDDDLRYIP LMNCIFAAQKMKVSIDVAKLGHNNSSYLQQASDATKGVYLHIEDPKGIIQVLSTAFFI EPNLRPYIILPTNSNVNYRASCFITGKSVDLGYVCSVCLCIMSQLPQSGKCPACDSEF DKKIIQDLNREPQVISKKKRKLENGSSTK" misc_feature 67..993 /locus_tag="CAALFM_C600640CA" /note="Transcription factor Tfb4; Region: Tfb4; pfam03850" /db_xref="CDD:461076" ORIGIN 1 atggaagcca tatccgatag actatttaat gagaatgcaa acacgataga atcagggaat 61 gatgacccat cattattgac tataatacta gatctttcaa tgaaaggatg gtataacatc 121 aaagaaatga tttcaataca agatatcacc aaatcattac tagttttctt gaatgggcat 181 ttgtcattaa acaatagtaa tcaagtggca tttttagtga gttctactat gggttctaaa 241 tttttatatc ccgatttaac tatggttgga aaccccaacg tgagtgaaca ttctgaacat 301 tttcctgaca tgtatcgact gtttaaaatg gttgaccaat ctgtgctaca acgattgaac 361 gagtatattg aagagattat caaattcgag acagggaatg aaaaaaaggg tttcaattgc 421 ttgactggag caatcagtat ggctttaacg tacacaaata gaatgttaac gttggatcaa 481 tcaatcacca ccacaactgc tgctgcaatg acagcttcta cgcttgaaag tacatccaac 541 aacaataata ctagtggcac tagtggatca tctagtacct catctagcac atcgatgaaa 601 tcaagagttt tgattgtgtc tgctaatgat gatgacgatc ttaggtatat tccattgatg 661 aattgtatat ttgctgccca gaaaatgaaa gtgtctattg acgtagcaaa attgggtcat 721 aacaactcat cctatttaca acaagcttct gatgccacca agggggttta tttacacatt 781 gaagatccaa agggaataat tcaagtgtta tcaaccgcat tttttataga acccaaccta 841 cgaccataca ttattttacc tacaaattca aatgtcaatt atcgagccag ttgtttcatt 901 actgggaaat cagtggactt gggatatgtg tgttctgttt gtttatgtat tatgtcacaa 961 ttgcctcaaa gtggtaaatg cccagcttgt gattctgaat ttgataaaaa gatcattcaa 1021 gatttaaata gagaacctca agttatttca aaaaagaaaa gaaaacttga aaatgggagt 1081 ctgactaaat ag