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LOCUS XM_705412 2619 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_705412 VERSION XM_705412.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2619) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2619) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2619) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2619) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2619) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2619) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2619 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2619 /gene="PGA25" /locus_tag="CAALFM_C600070CA" /db_xref="GeneID:3647890" CDS 1..2619 /gene="PGA25" /locus_tag="CAALFM_C600070CA" /note="Putative GPI-anchored adhesin-like protein; fluconazole-downregulated; induced in oralpharyngeal candidasis; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="Pga25p" /protein_id="XP_710504.1" /db_xref="CGD:CAL0000186851" /db_xref="GeneID:3647890" /translation="MKVTAVSSVLLTVAALTNANEIDKRSFFGDLFSGLTGSKAAAPA AAPAAQPAAQPTTQSPADQPTVQSPVSSDQPSTAQPVAQNNLLLDSSNSTLVVPSSSK SSTTTRSTAGLLDNLLGGSGATSSEASSSEAPSSEAPSSEAPSSEAPSSEAPSSEAPS SSSSEALSSSSTTKRPTAAAKGFFGDLFGTQSSASETDDEDCVEETESPTSAPASAPT TSKVATTTGGGLPNILSDLFPGKSSAPISSAESSPTVASSTTGFPNILSDLFPGKSSV PSSSAETSTTVASNTTTSGGGFPNILSDLFPGKSSVPSSSAEEDDEECEDPTESVTSN SSPTGGISIPTFPITSQSKTSVSSVVSKSTSEDDDDETECETDIPTIIPSGSVLPTTS VLPTIIPTGSGSITILPTKSATSDDDDDETDCETDIPTIVPTESATIIPTGSGSVTII PTGSGSITVLPTKSATSDDDDDETDCETDIPTIIPTGTATIKPTGSGSITVLPTKSTT TDDDDDETDCETEIPTIHPTVSTTRTFTSDGVPTTQTLTTKLPPTTNQHTETEVVSIT YTGGGQTFTTYLTQSGEICDETVTLTITTTCPSTTVAPGGQIYTTTVTVITTHTVYPD DWEDDGYEGEDNAGGSASGSSDDGEWEWYEEDDGECVPTGGSSSGSGTGSWWGSGAGS SGGTTSGSGSGSSSNSGASSGGTWGGSGNDYVCPGEEGYDDEEPDNGGSWWGGSGSGS SSGSSSGVSSGDSGSSSVTGGSSGSWWGGSGNDYVCPGEDGYDDEDDQTPEPECDDED DSWDDDEECDTQAAKEVVNSVTVAAESVYPSTTAASLTTSWISTQTAQSVTQIENIGG KVSASGLFVVLGLLLI" misc_feature 1291..1935 /gene="PGA25" /locus_tag="CAALFM_C600070CA" /note="Protein of unknown function (DUF3246); Region: DUF3246; pfam11596" /db_xref="CDD:371619" ORIGIN 1 atgaaagtaa cagctgtcag ttcggtgtta ctaacagttg ctgcattgac caatgcaaat 61 gaaattgaca agagaagttt ttttggtgat cttttttcag gattaacagg gagtaaggca 121 gcagctccag cggcagctcc agctgcacaa ccagctgcac aaccaactac tcaatcacca 181 gctgaccaac caactgtaca atcaccagtt tcatctgacc aaccatccac tgcacaacca 241 gttgctcaaa ataatttatt attagattct tcaaatagta ctttagttgt gccaagttca 301 tccaaatctt caacaaccac acgttccaca gctggtttat tagataattt gttaggagga 361 agtggtgcca catctagtga agcatcatcc agtgaagcac catccagtga agcaccatcc 421 agtgaagcac catccagtga agcaccatcc agtgaagcac catccagtga agcaccatcc 481 agctcatcaa gtgaagcttt gtctagcagc tcaacaacca aacgaccaac tgctgctgct 541 aaaggttttt tcggcgattt gtttggtact cagtcaagtg catctgaaac tgatgatgaa 601 gattgtgttg aagagactga aagtccaaca agtgctccag caagtgctcc aactacgtcc 661 aaggttgcta ctactaccgg tggtggactc ccaaatatat tgtcagatct ctttcctgga 721 aaatcaagtg ctcccatttc cagtgctgaa tctagcccaa ctgttgcttc tagtactact 781 ggattcccaa atatattgtc ggatcttttc cctggcaaat cgagtgttcc aagttccagt 841 gctgaaacta gcacaacagt tgcttctaat actaccacta gtggtggtgg tttcccaaac 901 attttatcgg atcttttccc agggaaatca agtgttccaa gttccagtgc tgaagaggat 961 gacgaagagt gtgaagatcc aacggaatcc gtaacctcga attctagtcc tactggaggg 1021 atttcaattc caacctttcc aatcaccagt caaagtaaaa caagtgtctc gtcagttgtt 1081 tcaaaaagca cttctgaaga tgatgatgat gaaactgagt gtgagacaga cattccaacg 1141 atcattccaa gtgggtctgt ccttccaaca acgtcagttc ttccaactat tatccctact 1201 ggatcaggat ctattactat tcttccaact aaatctgcta cttctgatga tgatgatgat 1261 gagactgatt gtgagacaga cattccaaca attgtgccaa ctgagtcagc cactattatc 1321 ccaactgggt ctggttctgt aactatcatt ccaactggat caggatctat tactgttctc 1381 ccaacaaagt ctgctacttc tgatgacgat gatgatgaga ctgattgtga aaccgatata 1441 ccaacgatca ttccaactgg aacagccact atcaaaccaa ctggatcagg atctattact 1501 gttctcccaa caaagtcaac cactactgat gacgacgatg acgagactga ttgtgaaact 1561 gaaattccta ctatccatcc aactgtgtca accactagaa catttacttc cgatggggtg 1621 ccaacaactc aaacactcac cacgaaatta cctccaacca ctaatcaaca tactgaaacg 1681 gaagttgttt ctatcacata tactggtggt ggtcagacat ttaccactta tcttacacaa 1741 tctggtgaaa tctgtgatga aactgttacg ttgacaatca caaccacatg tccactgacg 1801 actgttgctc caggtggaca gatatatact acgactgtga ctgttattac cacacacact 1861 gtctatccag atgactggga agatgatggc tatgaagggg aagacaatgc cggtggttct 1921 gccagtggct cctctgatga tggtgaatgg gaatggtatg aagaagatga tggcgaatgt 1981 gtgccaacag gtggatcaag ttctggatct ggcacaggct cttggtgggg ttctggtgct 2041 ggatcaagtg gtggtactac ttctggttct ggttctggat caagttcaaa ttctggagca 2101 agttctggtg gtacctgggg tggatctgga aatgattacg tttgtcctgg tgaagaaggt 2161 tatgacgatg aagagccaga caatggtggc agctggtggg gtggttcggg atctggttca 2221 agttctggat ccagttctgg tgttagttca ggtgattccg gttcttcttc agttactggt 2281 ggatcgtctg gaagctggtg gggtggatct ggtaacgatt atgtttgccc tggtgaagat 2341 ggctacgatg atgaagatga tcaaactcct gaaccagagt gtgacgatga ggatgatagc 2401 tgggatgatg atgaagagtg tgatacacaa gctgctaagg aagttgtcaa ctcggttact 2461 gttgctgctg aaagtgttta tccatctacc actgctgcca gtttgaccac atcatggata 2521 tcgacacaaa ctgcccaatc agtcacacaa attgagaata ttggtggtaa ggtttctgcc 2581 agtggacttt ttgttgttct tgggttgttg ttgatataa