Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_705405 786 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_705405 VERSION XM_705405.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 786) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 786) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 786) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 786) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 786) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 786) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..786 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>786 /locus_tag="CAALFM_C600110CA" /db_xref="GeneID:3647896" CDS 1..786 /locus_tag="CAALFM_C600110CA" /note="Ortholog of C. dubliniensis CD36 : Cd36_60130, C. parapsilosis CDC317 : CPAR2_603380, Candida tenuis NRRL Y-1498 : CANTEDRAFT_94402 and Debaryomyces hansenii CBS767 : DEHA2G06556g" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_710497.1" /db_xref="CGD:CAL0000185865" /db_xref="GeneID:3647896" /translation="MSFTFLLSPTMSAPDEIELDFNDIIPAELPQSRISLPPDYSSTN HITNELFQVTRDKNRHPKRLNNDKIQKMIRDLEETDYELDDVVRTRVFKGRLKNRHSF SQVRSDLNEYFDENKENRDKPSKVTKKKSPVPILQPITNSSKPKRVCLPKHTVLRPRK PALKQDGATTIFLMESSSGLVNDATKYATELNSSQCEDFPLPEHENEVVQIPTNEDDN PKMAIIRMFKTKRVGSEQENGVQVVSQTAPTKKTVKWATNLEW" ORIGIN 1 atgtccttta cttttcttct ttcaccaacc atgtcagcac ccgacgagat tgaattagat 61 tttaatgata taataccagc agagcttccg cagagcagga tatcgttgcc tccagactat 121 agcagcacca atcatattac gaacgaattg ttccaggtga ccagagataa gaaccgccat 181 cctaaacggt tgaacaacga taagatccag aaaatgattc gggacctaga ggaaacagat 241 tacgagctag atgatgtggt gaggacgaga gtgtttaaag ggagactaaa aaaccgacac 301 agctttagcc aagtgcgttc tgacttgaat gagtactttg atgaaaacaa agagaatcgg 361 gataagccgt cgaaagttac aaagaaaaag tcgccggtgc ccatactaca gccaatcacc 421 aatagttcca aacccaaacg agtgtgtttg ccgaaacaca cggtgctacg tccacggaaa 481 cctgcgctca aacaagatgg ggccactacg atatttctta tggagtcgct gtcgggacta 541 gttaatgatg cgaccaagta tgctactgag ctcaatagtt cgcagtgtga ggactttcca 601 ctaccggaac acgagaatga agtggtgcag attccgacca atgaagatga taacccgaaa 661 atggcgatta tcaggatgtt caagaccaag agggttggga gcgagcagga gaatggggtg 721 caggtagttt cacagacggc acccaccaaa aagacagtta aatgggccac gaatttagaa 781 tggtaa