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LOCUS XM_705333 6303 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_705333 VERSION XM_705333.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 6303) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 6303) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 6303) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 6303) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 6303) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 6303) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_705333.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..6303 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>6303 /gene="ALS4" /locus_tag="CAALFM_C604130CA" /db_xref="GeneID:3647972" CDS 1..6303 /gene="ALS4" /locus_tag="CAALFM_C604130CA" /note="GPI-anchored adhesin; role in adhesion, germ tube induction; growth, temperature regulated; expressed during infection of human buccal epithelial cells; repressed by vaginal contact; biofilm induced; repressed during chlamydospore formation" /codon_start=1 /transl_table=12 /product="Als4p" /protein_id="XP_710425.2" /db_xref="CGD:CAL0000174423" /db_xref="GeneID:3647972" /translation="MLLQFLLLSLCVSVATAKVITGIFDSFNSLTWTNAASYSYRGPA NPTWTAVIGWSLDGATASAGDTFTLDMPCVFKFITDQTSIDLVADGRTYATCNLNSAE EFTTFSSVSCTVTTTMTADTKAIGTVTLPFSFSVGGSGSDVDLANSQCFTAGINTVTF NDGDTSISTTVDFEKSTVASSDRILLSRILPSLSQAVSLFLPQECANGYTSGTMGFST AGTGATIDCSTVHVGISNGLNDWNYPISSESFSYTKTCTSTSVLVTYQNVPAGYRPFV DAYVSATRVSSYAMRYTNIYACVGAASVDDSFTHTWSGYSNSQAGSNGITIVVTTRTV TDSTTAVTTLPFNSESDKTKTIEILQPIPTTTITTSYVGVTTSYSTKTAPIGETATVI VDVPYHTTTTVTSEWTGTITTTTTRTNPTDSIDTVVVQVPSPNPTVTTTEYWSQSYAT TTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTAPPGGTDSVIIREPPNP TVTTTEYWSQSYATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTAPP GGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTAPPGGTDSVIIREPPNPTVTTTEYW SQSFATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSFATTTTVTAPPGGTDSVII REPPNPTVTTTEYWSQSYATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSFATTT TVTAPPGGTDSVIIREPPNPTVTTTEYWSQSFATTTTVTAPPGGTDSVIIREPPNPTV TTTEYWSQSYATTTTVTAPPGGTDTVIIREPPNYTVTTTEYWSQSYATTTTVTGPPGG TDTVIIREPPNPTVTTTEYWSQSYATTTTVTSPPGGTDIVIIREPPNPTVTTTEYWSQ SYATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTAPPGGTDSVIIRE PPNPTVTTTEYWSQSYATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSFATTTTV TAPPGGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTAPPGGTDTVIIREPPNYTVTT TEYWSQSYATTTTVTGPPGGTDTVIIREPPNPTVTTTEYWSQSYATTTTVTSPPGGTD IVIIREPPNPTVTTTEYWSQSFATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSY ATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTAPPGGTDTVIIREPP NPTVTTTEYWSQSYATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTA PPGGTDTVIIREPPNYTVTTTEYWSQSYATTTTVTAPPGGTDTVIIREPPSPTVTTTE YWSQSYATTTTVTAPPGGTATVIIKEPPNYTVTTTEYWSQSYATTTTITAPPGGTDTV IIREPPNYTVTTTEYWSQSYATTTTVTAPPGGTDTVIIREPPNYTVTTTEYWSQSYAT TTTVTGPPGGTDTVIIREPPSPTVTTTEYWSQSYATTTTVTAPPGGTATVIIREPPNY TVTTTEYWSQSYATTTTITAPPGGTDTVIIREPPNYTVTTTEYWSQSYATTTTVTGPP GGTDTVIIREPPNYTVTTTEYWSQSYATTTTVTGPPGGTDTVIIREPPNYTVTTTEYW SQSYATTTTVTGPPGGTDTVIIREPPNPTVTTTEYWSQSYATTLTITAPPGGTNSVII RVHSSTNDESSESTFSTLSVPSFSGSISIVSTVSRPHYVNSTVTHLPSSSSKPVDIPS SDVVTSTNDNSLTSLTGSENGKTSVAISTTFCDDENGCQTSIPQGSVVRTTATTTATT TTIIGDNNGSGKSKSGELSSTGSVTTNTATPDVPSTKVPSNPGAPGTGVPPPLAPSTE TQTTNNVPGSPNIPATGTTDIIRESTTVSHTVTGNGNTGVPMNPNPVLTTSTSLTGAT NSATNPSHETSVNTGSGGSTNIVTPPSSATATVVIPGTDNGATTKGQDTAGGGNSNGS TATTNIQGGNNEPGNQPGTNTTGEPVGTTDTQSVESISQPTTLSQQTTSSLISTPLAS TFDGSGSIVQHSGWLYVLLTAISIFF" misc_feature 169..894 /gene="ALS4" /locus_tag="CAALFM_C604130CA" /note="Cell-wall agglutinin N-terminal ligand-sugar binding; Region: Candida_ALS_N; pfam11766" /db_xref="CDD:403080" misc_feature 5548..>6132 /gene="ALS4" /locus_tag="CAALFM_C604130CA" /note="Chitinase [Carbohydrate transport and metabolism]; Region: Chi1; COG3469" /db_xref="CDD:442692" ORIGIN 1 atgcttttac aatttttgtt gctaagcctc tgtgtatcag ttgctacggc aaaggttatt 61 acgggcattt tcgatagttt taattcgtta acttggacca atgctgcttc ttattcatat 121 agaggtccag ctaatcctac ttggaccgct gtaataggat ggtctttaga tggagctact 181 gctagtgctg gtgacacatt cacgttagac atgccatgtg ttttcaaatt tattactgat 241 caaacgtcaa ttgatttagt tgctgatggt cgtacttatg ctacttgtaa tttgaactct 301 gccgaagagt ttactacttt ttctagtgtg tcatgtactg tgactactac aatgactgct 361 gacaccaaag ccataggaac tgtaacatta cctttctcat tcagtgtggg gggatcaggt 421 tcagatgttg atttggcaaa ttctcaatgt tttactgcag gaatcaatac agttactttt 481 aatgatggtg acactagcat ttccacaaca gttgattttg aaaaatcaac cgtggcctcc 541 agcgatcgta tcttgttgtc aagaatttta cccagtcttt cacaagcagt aagtcttttt 601 cttccccaag aatgtgcaaa tggttatact tctggtacaa tgggattttc aactgctggt 661 actggtgcta ctatagattg ttccacagtt catgtcggga tatcaaatgg gttgaatgat 721 tggaattatc caatttcact ggaatctttt tcttacacaa agacctgtac atcaacaagt 781 gttttagtaa catatcagaa tgttcctgcc ggatatcgtc catttgtcga tgcttatgtt 841 tctgcaacac gagtcagctc atatgctatg agatacacta atatatatgc ttgtgttggt 901 gcggcttctg ttgatgactc atttactcat acttggctgg gatatagtaa tagtcaagct 961 ggttctaatg gtattaccat tgtggtaaca actagaacag ttacagacag taccactgct 1021 gtgactactt taccattcaa ttccgaatct gacaaaacca aaacaatcga aattttacaa 1081 cctattccaa caactaccat tacaacttca tatgttggtg tgacaacttc ctacctgact 1141 aagactgcac caattggtga aacagctact gttattgttg atgtgccata tcatactacc 1201 acaactgtta ccagtgaatg gacaggaaca atcactacca ctacaactcg taccaatcca 1261 actgattcta tagatactgt cgttgtgcaa gttccactgc caaatccaac tgtcactaca 1321 accgagtatt ggtctcagtc atatgctact actactactg ttactgctcc tccaggtggt 1381 actgactcag taattatcag agagccacca aatccaactg tcactacaac cgagtattgg 1441 tctcagtcat atgctactac tactactgtt actgctcctc caggtggtac tgactcagtg 1501 attatcagag aacctccaaa cccaactgta accaccaccg agtattggtc acaatcttat 1561 gctacaacta ctacagtcac tgctcctcca ggtggtactg actcagtaat tatcagagaa 1621 ccaccaaatc caactgtcac caccaccgag tattggtcac aatcttatgc tactactact 1681 acagttactg ctcctccagg aggcactgac tcagtaatta tcagagaacc tccaaaccca 1741 actgtcacca ccaccgagta ttggtcccaa tcttacgcaa ccacaactac tgtgactgct 1801 ccgccgggtg gtactgactc agtaattatc agagaaccac caaatccaac tgtcactaca 1861 accgagtatt ggtctcaatc ctttgctact actactactg ttactgctcc tccaggtggt 1921 actgactcag tgattatcag agaacctcca aacccaactg taaccaccac tgaatattgg 1981 tcacagtcct ttgctactac tactacagtt actgctcctc caggtggtac tgactcagtg 2041 attatcagag aacctccaaa cccaactgtc accaccactg aatattggtc ccaatcttac 2101 gcaaccacaa ctactgtgac tgctccgccg ggtggtactg actcagtaat tatcagagag 2161 ccaccaaacc caactgtcac caccactgaa tattggtctc aatcctttgc tactactact 2221 actgttactg ctcctccagg tggtactgac tcagtgatta tcagagaacc tccaaaccca 2281 actgtaacca ccactgaata ttggtcacag tcctttgcta ctactactac agtcaccgct 2341 cctccaggag gcactgactc agtgattatc agagaacccc caaacccaac tgtaaccacc 2401 accgagtatt ggtcacagtc gtacgcaact acaactactg taactgcccc tccaggtggt 2461 actgacactg tgattattag agagccacca aactacacgg tcactactac tgaatactgg 2521 tcacaatcat atgctacaac cactacagtc actggtccac caggaggtac cgatactgtt 2581 attattaggg agccaccaaa tccaactgta accactactg aatactggtc tcaatcgtac 2641 gctaccacca ccactgttac tagtccaccg ggaggcactg atatcgttat cattagagaa 2701 cctccaaacc caactgtcac caccaccgag tattggtcac aatcttatgc tactactact 2761 acagttactg ctcctccagg aggcactgac tcagtaatta tcagagaacc tccaaaccca 2821 actgtcacca ccaccgagta ttggtcccaa tcttacgcaa ccacaactac tgtgactgct 2881 ccgccgggtg gtactgactc agtaattatc agagaacctc caaacccaac tgtcaccacc 2941 accgagtatt ggtcccaatc ttacgcaacc acaactactg tgactgctcc gccgggtggt 3001 actgactcag tgattatcag agaacctcca aacccaactg taaccaccac tgaatattgg 3061 tcacagtcct ttgctactac tactacagtc accgctcctc caggaggcac tgactcagtg 3121 attatcagag aacccccaaa cccaactgta accaccaccg agtattggtc acagtcgtac 3181 gcaactacaa ctactgtaac tgcccctcca ggtggtactg acactgtgat tattagagag 3241 ccaccaaact acacggtcac tactactgaa tactggtcac aatcatatgc tacaaccact 3301 acagtcactg gtccaccagg aggtaccgat actgttatta ttagggagcc accaaatcca 3361 actgtaacca ctactgaata ctggtctcaa tcgtacgcta ccaccaccac tgttactagt 3421 ccaccgggag gcactgatat cgttatcatt agagaacctc caaacccaac tgtcaccacc 3481 actgaatatt ggtcacagtc ctttgctact actactacag ttactgctcc tccaggtggt 3541 actgactcag taattatcag agaacctcca aatccaactg tcaccaccac cgagtattgg 3601 tctcaatctt atgctactac tactacagtt actgctcctc caggaggcac tgactcagta 3661 attatcagag aacctccaaa cccaactgtc accaccaccg agtattggtc ccaatcttac 3721 gcaaccacaa ctactgtgac tgctccgccg ggtggtactg acactgtaat tattagagaa 3781 cctccaaacc caacagttac aacaactgag tactggtcac aatcctatgc tactactact 3841 acagtcactg ctcctccagg tggtactgac tcagtaatta tcagagaacc cccaaaccca 3901 actgtcacca ccactgaata ttggtcccaa tcttacgcaa ccacaactac tgtgactgct 3961 ccaccaggtg gcactgacac tgtgattatt agagagccac ctaattatac tgtcaccaca 4021 actgaatact ggtctcaatc gtacgctacc accaccactg ttactgcccc tccaggtggc 4081 actgatactg ttatcattag agaacctcca agcccaacag ttacaacaac cgagtactgg 4141 tcacaatctt acgcaaccac aactaccgtg actgctcctc caggaggtac cgctactgtg 4201 atcataaaag agccacctaa ttacactgta accactactg aatactggtc tcagtcctat 4261 gctacgacca ccactattac tgcaccaccg ggaggcactg acacggttat catcagagaa 4321 cctccaaatt acacggttac cacaactgaa tactggtctc aatcatatgc aaccaccact 4381 actgttactg caccaccagg tggcactgac actgtgatta ttagggagcc accaaactat 4441 actgtcacca ctactgaata ttggtctcaa tcatatgcta ctacaactac tgtgactggt 4501 ccaccgggag gcactgatac cgttatcatt agggagccac caagtccaac agttacaaca 4561 accgagtact ggtcccagtc atatgctact actacaactg tgactgctcc tccaggaggt 4621 actgctactg ttatcataag agagccacct aattacactg taaccactac tgaatactgg 4681 tctcagtcct atgctacgac caccactatt actgcaccac cgggaggcac tgacacggtt 4741 atcatcagag aacctccaaa ttacacggtt accacaactg aatactggtc tcaatcgtac 4801 gctaccacca ccactgttac tggtccaccg ggaggcactg ataccgttat cattagagag 4861 ccaccaaatt acacggttac tacaactgaa tattggtccc aatcttatgc tacgaccacc 4921 actgttactg gtccaccggg aggcactgac accgttatca ttagagagcc accaaattac 4981 acggttacta caactgaata ttggtcccaa tcttatgcta cgaccaccac tgttactggt 5041 ccaccgggag gcactgacac tgtgattatt agagaacctc caaacccaac agttacaaca 5101 actgagtact ggtcacaatc ttatgcaact actttgacca tcactgcccc accaggtggc 5161 accaatagtg tcattatccg agtccattcc agtactaatg atgaatcaag tgagtccaca 5221 ttttcaacat tgtctgttcc ctcgttctca ggttcaataa gtattgtttc cacagtttct 5281 cgtccacatt atgtgaactc tacagttacc cacttaccta gttccctgtc aaaaccagta 5341 gatattcctt ctagtgatgt tgtaacatct actaatgaca atagtttgac ttctttgact 5401 ggttctgaaa atggtaaaac aagcgtggca atatctacaa cattctgtga tgatgaaaat 5461 ggttgtcaaa cttctattcc acaaggttct gttgttagaa ctacagcaac aacaacagca 5521 acaaccacaa caattattgg tgataataat ggatcaggta agtcaaagtc tggtgagtta 5581 tcttctactg gttctgtgac aactaataca gcaacaccag atgttccatc aactaaagta 5641 ccttcgaatc caggggcacc aggtactggt gttccaccac ctttagcacc atcgacagaa 5701 acacaaacta ccaataatgt accaggctca ccaaatatcc ctgccactgg aacaactgat 5761 attattagag aatcaactac tgtttcacac acagtgaccg ggaatggaaa tactggcgtt 5821 ccaatgaatc caaaccctgt gttgacaaca agcacttcat tgactggagc aacgaattct 5881 gcaactaacc catctcatga aacaagtgtt aatacaggat caggaggctc aactaatatt 5941 gtcactccac cttcttctgc aactgcgaca gtggttattc caggaactga taatggtgct 6001 actaccaagg gtcaagatac agctggtggc ggcaactcta atggatctac tgctaccacc 6061 aatatacaag gtggcaataa tgaaccagga aatcaaccag gtactaatac aactggagaa 6121 cctgttggta ctactgatac ccaaagtgtt gaatcaattt ctcaaccaac tacattaagt 6181 caacaaacaa caagttcctt aatcagcacg cctttggctt ctacatttga tggttctggt 6241 tctattgtcc aacattcggg ttggttgtat gtgttactta ctgctatttc tatattcttt 6301 tag