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LOCUS XM_070219348 4341 bp mRNA linear INV 09-DEC-2024 transcript variant X7, mRNA. ACCESSION XM_070219348 VERSION XM_070219348.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4341 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4341 /gene="shi" /note="dynamin-1 shibire; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins" /db_xref="GeneID:108056704" CDS 520..3024 /gene="shi" /codon_start=1 /product="dynamin isoform X3" /protein_id="XP_070075449.1" /db_xref="GeneID:108056704" /translation="MDNLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLE NFVGKDFLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDR VTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIR KETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENK LLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLGTPYLQRVL NQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSD FERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIH GIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTSKMSRYPRLRE ETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTR QLGNQVIRKGHMVIQNLGIMKGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKL RDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPE KQETQENGDEEGQESASEESSTDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMM LIINNAKDFINGELLAHLYASGDQSQMMEESAESATRREEMLRMYRACKDALQIIGDV SMATVSSPLPPPVKNDWLPSGLDNPRLSPPSPGGARGKPGPPAQSALGGRNPPLPPAT GRPAPAIPNRPGGGAPPLPGGRPGGALPPPMLPSRR" misc_feature 520..1239 /gene="shi" /note="Dynamin, GTPase; Region: DYNc; smart00053" /db_xref="CDD:197491" misc_feature 616..639 /gene="shi" /note="G1 box; other site" /db_xref="CDD:206738" misc_feature order(619..621,625..642,679..684,697..699,910..912, 1120..1122,1126..1131,1207..1221,1228..1230) /gene="shi" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206738" misc_feature order(622..627,922..924,961..963,1036..1038,1042..1044, 1048..1059,1063..1068,1129..1131,1135..1146,1216..1224) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:206738" misc_feature 697..699 /gene="shi" /note="G2 box; other site" /db_xref="CDD:206738" misc_feature 709..717 /gene="shi" /note="Switch I region; other site" /db_xref="CDD:206738" misc_feature 910..921 /gene="shi" /note="G3 box; other site" /db_xref="CDD:206738" misc_feature order(916..921,1009..1014) /gene="shi" /note="Switch II region; other site" /db_xref="CDD:206738" misc_feature 1117..1128 /gene="shi" /note="G4 box; other site" /db_xref="CDD:206738" misc_feature 1147..2013 /gene="shi" /note="Dynamin central region; Region: Dynamin_M; pfam01031" /db_xref="CDD:460033" misc_feature 1207..1215 /gene="shi" /note="G5 box; other site" /db_xref="CDD:206738" misc_feature 2053..2394 /gene="shi" /note="Dynamin pleckstrin homology (PH) domain; Region: PH_dynamin; cd01256" /db_xref="CDD:269958" misc_feature order(2059..2061,2065..2070,2074..2076,2125..2127, 2338..2343,2350..2352,2359..2364,2371..2373) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:269958" misc_feature 2464..2739 /gene="shi" /note="Dynamin GTPase effector domain; Region: GED; smart00302" /db_xref="CDD:128597" misc_feature <2722..3015 /gene="shi" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" polyA_site 4341 /gene="shi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaattcatt gaaacagttt ggagtggtgg agtgtggtga tagtcgtcag tttgcacaat 61 aagaatattt gctaaagaca gccccaaatt gttaatgtta atctagctgt gcgtggggcg 121 atggacatga catgaacaca aacactacac tgttacgcct gagactgaga accgagaagc 181 gaaggaggat tggaaaagtc gatgataatt cccatttcct tggcagtata tatacaaatt 241 ctttttgtgt aaatgtcgat aaacagtttt gcttgcaacc cgacaacctt tagatgtcgc 301 caccgccact cgcgagttct cagagttcca ttataatcag acactcggca tgaaataaaa 361 caaaagtaat tgcagaggag tgcagtgcag aaaacccaga gatcagagat cagaacacaa 421 gccacccggg gacgagtcag agtcaggatc gcagttcgat ccgagagcct aatctaatcc 481 gattgcgaga gaccccatcc acatccagaa cttgccgcaa tggataacct aatcacgatt 541 gtaaacaagc tgcaggatgc gttcacatcg ctcggcgtcc atatgcagtt ggatctgccg 601 cagatcgcgg tggtcggtgg ccaatcagct ggcaagagtt ctgttctgga gaacttcgtt 661 ggcaaagatt tcttgcctcg tggctctggt atcgtgactc gaagaccttt aatattgcaa 721 ctgatcaatg gagtcaccga atacggagag ttccttcaca ttaaaggcaa aaagttctcg 781 agcttcgatg agatcagaaa agaaatcgaa gatgagacgg atcgtgtgac cggcagcaac 841 aaaggcattt caaacattcc aattaatttg cgcgtctact cgccgcacgt actcaatcta 901 actctgatcg atttgccggg cctgacgaag gtggcaattg gcgatcagcc ggtggacatt 961 gagcagcaaa ttaagcagat gatattccaa tttattcgca aagagacttg cttgattctg 1021 gccgttacgc cggccaacac ggatctggcc aactcggatg ctctgaagct ggccaaggag 1081 gtggatccgc agggtgtgcg caccatcggc gtgataacca agctggatct gatggacgag 1141 ggcaccgatg cccgggacat tctggagaac aagctgctac cgctgcggcg gggctatatt 1201 ggtgtggtca atcgatcgca gaaggacatc gaggggcgca aggacatcca ccaggcgctc 1261 gccgccgagc gcaagttctt cttgagccac ccctcgtacc gtcacatggc cgatcgtctc 1321 ggaaccccct acttgcagcg ggtcctcaat cagcagctca ccaaccacat tcgggacacg 1381 ttgcccggcc tgcgggacaa gttgcagaag cagatgctca ctttggagaa ggaggtggag 1441 gagttcaagc acttccagcc gggcgatgcc agcatcaaga caaaggctat gctccaaatg 1501 attcagcagc tgcagtcgga ctttgagcga accatcgagg gcagcggctc ggccttggtc 1561 aatacaaatg agctctcggg cggcgccaag atcaatcgca ttttccacga acgtctgcgc 1621 ttcgagatcg tcaagatggc ctgcgacgag aaggaactgc ggcgagagat ctcattcgct 1681 atccggaaca ttcacggcat tcgcgtgggc ctcttcacac ccgacatggc gttcgaggcg 1741 attgtcaaga ggcagatagc gctgctcaag gagccggtca tcaagtgtgt ggatctagtc 1801 gtacaggaac tttctgtggt tgtgcgcatg tgcacatcta aaatgagtcg atacccacgt 1861 ctgcgcgagg agaccgaacg cattatcacc acgcatgttc gccaacgcga gcacagctgc 1921 aaggaacaga tcctcctgct gattgacttt gagctggcct acatgaacac caaccatgag 1981 gacttcattg gtttcgccaa cgctcaaaat aaatctgaaa atgccaataa aactggcacg 2041 cgtcagcttg gcaaccaagt tatacgtaag gggcacatgg tcatacagaa ccttggtatc 2101 atgaaaggtg gatcgcgtcc ctattggttt gtgttgactt ccgagagtat ctcctggtac 2161 aaggacgagg atgagaagga gaagaagttc atgctgccgt tggatggttt aaaattgcgg 2221 gatattgaac agggatttat gtcaatgtct agacgtgtta catttgcttt atttagtccc 2281 gatggacgta atgtttataa ggactacaaa caactggagc tgtcgtgcga gaccgtggag 2341 gatgtggagt cctggaaagc ctccttcctg cgggctggtg tctatcccga gaagcaggag 2401 acccaggaga acggggatga ggaaggacaa gagtcggcca gcgaggagag ttccaccgat 2461 ccacagttgg agcggcaggt tgagaccatc cgcaatctgg tggactcgta catgaagatc 2521 gtgaccaaga ccacgcgaga catggtgccc aaggcgatta tgatgctaat aataaacaac 2581 gccaaggact ttatcaacgg ggagcttctg gcacatctct atgcgtctgg tgatcagtcc 2641 cagatgatgg aagagtccgc cgagtcggcc acgcgacgag aggagatgct gcgtatgtac 2701 cgtgcttgca aggatgctct gcagatcata ggcgacgtat ccatggccac tgtgtcctcg 2761 ccattgcctc cgccggttaa gaacgattgg ctacccagtg gcttggacaa cccacgtctc 2821 tcccctccga gtccgggtgg agcccgaggt aaaccaggac ctcccgcaca gagcgcctta 2881 ggtggacgga acccaccatt gccaccagca acaggccgcc cggctccagc gattccgaat 2941 cgcccaggag gtggggcacc accgctaccc ggcggtcgtc ctggaggagc tctgccccca 3001 ccaatgttac catcacgtcg ttaaattgtt gtcagcatcg cgattcgcga cacatctagg 3061 ggatgaacct tcaaaaagta gcttgctgac gattaaccca cacaataccc aatccaattc 3121 tactttcaac aattgtaatt tgatattatt ccggcagaat ccaaaatccg agatcagaaa 3181 tccgaaatca acaacgatgg gaaatcgata catttaaatc gcttgcgtat tattgtagtc 3241 atatataatc tgaagcgttg aaaccgatat aaattcttaa tatgtgaaaa gcaactagtc 3301 gagatgcaca tgatttcttt aattccataa gatgtctttc gtaatgtcta ctttcctgtg 3361 tagatataca acatatgatc tattatatat gatatatgta caaatgtgtg tgcatttgtt 3421 cgtgcatgtc taattattat ctattatttt atgtcccctt atcaatggca tacgctcaaa 3481 agttatgtaa actatttgta tgggcagatg cttagtgacg atattaacca atgatcttaa 3541 ttatatagct aactattaat aaatagcttt cgttaactgc attgtgttgt tgttgatgtt 3601 gaactataaa acccaattaa attagaaaat gttaggtaaa gcagcgttga aaacatttca 3661 agtcagtcac aaagtatttc cttgaactta aagctaaaca ctaatgatat ataaatataa 3721 aaatacccct tccatttaat cgataaagta ttgggctata aactgattga gattgctttc 3781 gtttttctgc ttaaaaaatt aaaaatttag ctggttcggt tacttttctt atgtaatcta 3841 tgtaagaaaa atgtggaatt gctagctgtc ccgtttccaa gaaacgatta agttacagga 3901 ttaagttaac gcttacttga attgtccatt ccttgaaata tttttaggct ttaatttcac 3961 tttgatgaaa tagcaatact ttcatgtttt atgtaaccaa atcgcaaaga tcttttcgag 4021 tggtttgtat cgattcccaa taacatacaa atattattta acataatttt atagagccaa 4081 tgtcaagtgt ctttttaagt ttgacattaa accgattttt tgccaccgca accataaact 4141 aatatacgtg tttccaatat ttatatgtaa aatgtattat ttttaatgtt gattacaaat 4201 ataagtcatg aaaatactct tgtgacttac tcaaatggat tgtgacgatg gaaattgcag 4261 caacttatat tacatatgac cagtttacgt atacacaaat aaagtgcata aataaataca 4321 taaattgttc gtattacata a