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LOCUS XM_070219347 3243 bp mRNA linear INV 09-DEC-2024 transcript variant X5, mRNA. ACCESSION XM_070219347 VERSION XM_070219347.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3243 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3243 /gene="shi" /note="dynamin-1 shibire; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins" /db_xref="GeneID:108056704" CDS 268..2913 /gene="shi" /codon_start=1 /product="dynamin isoform X1" /protein_id="XP_070075448.1" /db_xref="GeneID:108056704" /translation="MDNLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLE NFVGKDFLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDR VTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIR KETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENK LLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLGTPYLQRVL NQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSD FERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIH GIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTSKMSRYPRLRE ETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTR QLGNQVIRKGHMVIQNLGIMKGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKL RDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPE KQETQENGDEEGQESASEESSTDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMM LIINNAKDFINGELLAHLYASGDQSQMMEESAESATRREEMLRMYRACKDALQIIGDV SMATVSSPLPPPVKNDWLPSGLDNPRLSPPSPGGARGKPGPPAQSALGGRNPPLPPAT GRPAPAIPNRPGGGAPPLPGGRPGGALPPPMLPSRVTGSVGGAIVQQSGANRYVPESM RGQVNQAVGQAAINELSHAFSSRFK" misc_feature 268..987 /gene="shi" /note="Dynamin, GTPase; Region: DYNc; smart00053" /db_xref="CDD:197491" misc_feature 364..387 /gene="shi" /note="G1 box; other site" /db_xref="CDD:206738" misc_feature order(367..369,373..390,427..432,445..447,658..660, 868..870,874..879,955..969,976..978) /gene="shi" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206738" misc_feature order(370..375,670..672,709..711,784..786,790..792, 796..807,811..816,877..879,883..894,964..972) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:206738" misc_feature 445..447 /gene="shi" /note="G2 box; other site" /db_xref="CDD:206738" misc_feature 457..465 /gene="shi" /note="Switch I region; other site" /db_xref="CDD:206738" misc_feature 658..669 /gene="shi" /note="G3 box; other site" /db_xref="CDD:206738" misc_feature order(664..669,757..762) /gene="shi" /note="Switch II region; other site" /db_xref="CDD:206738" misc_feature 865..876 /gene="shi" /note="G4 box; other site" /db_xref="CDD:206738" misc_feature 895..1761 /gene="shi" /note="Dynamin central region; Region: Dynamin_M; pfam01031" /db_xref="CDD:460033" misc_feature 955..963 /gene="shi" /note="G5 box; other site" /db_xref="CDD:206738" misc_feature 1801..2142 /gene="shi" /note="Dynamin pleckstrin homology (PH) domain; Region: PH_dynamin; cd01256" /db_xref="CDD:269958" misc_feature order(1807..1809,1813..1818,1822..1824,1873..1875, 2086..2091,2098..2100,2107..2112,2119..2121) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:269958" misc_feature 2212..2487 /gene="shi" /note="Dynamin GTPase effector domain; Region: GED; smart00302" /db_xref="CDD:128597" misc_feature 2395..>2787 /gene="shi" /note="Fibronectin-attachment protein (FAP); Region: FAP; pfam07174" /db_xref="CDD:429334" polyA_site 3243 /gene="shi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtcgaaaaaa ttcattgaaa cagtttggag tggtggagtg tggtgatagt cgtcagtttg 61 cacaataaga atatttgcta aagacagccc caaattgtta atgttaatct agcttaattg 121 cagaggagtg cagtgcagaa aacccagaga tcagagatca gaacacaagc cacccgggga 181 cgagtcagag tcaggatcgc agttcgatcc gagagcctaa tctaatccga ttgcgagaga 241 ccccatccac atccagaact tgccgcaatg gataacctaa tcacgattgt aaacaagctg 301 caggatgcgt tcacatcgct cggcgtccat atgcagttgg atctgccgca gatcgcggtg 361 gtcggtggcc aatcagctgg caagagttct gttctggaga acttcgttgg caaagatttc 421 ttgcctcgtg gctctggtat cgtgactcga agacctttaa tattgcaact gatcaatgga 481 gtcaccgaat acggagagtt ccttcacatt aaaggcaaaa agttctcgag cttcgatgag 541 atcagaaaag aaatcgaaga tgagacggat cgtgtgaccg gcagcaacaa aggcatttca 601 aacattccaa ttaatttgcg cgtctactcg ccgcacgtac tcaatctaac tctgatcgat 661 ttgccgggcc tgacgaaggt ggcaattggc gatcagccgg tggacattga gcagcaaatt 721 aagcagatga tattccaatt tattcgcaaa gagacttgct tgattctggc cgttacgccg 781 gccaacacgg atctggccaa ctcggatgct ctgaagctgg ccaaggaggt ggatccgcag 841 ggtgtgcgca ccatcggcgt gataaccaag ctggatctga tggacgaggg caccgatgcc 901 cgggacattc tggagaacaa gctgctaccg ctgcggcggg gctatattgg tgtggtcaat 961 cgatcgcaga aggacatcga ggggcgcaag gacatccacc aggcgctcgc cgccgagcgc 1021 aagttcttct tgagccaccc ctcgtaccgt cacatggccg atcgtctcgg aaccccctac 1081 ttgcagcggg tcctcaatca gcagctcacc aaccacattc gggacacgtt gcccggcctg 1141 cgggacaagt tgcagaagca gatgctcact ttggagaagg aggtggagga gttcaagcac 1201 ttccagccgg gcgatgccag catcaagaca aaggctatgc tccaaatgat tcagcagctg 1261 cagtcggact ttgagcgaac catcgagggc agcggctcgg ccttggtcaa tacaaatgag 1321 ctctcgggcg gcgccaagat caatcgcatt ttccacgaac gtctgcgctt cgagatcgtc 1381 aagatggcct gcgacgagaa ggaactgcgg cgagagatct cattcgctat ccggaacatt 1441 cacggcattc gcgtgggcct cttcacaccc gacatggcgt tcgaggcgat tgtcaagagg 1501 cagatagcgc tgctcaagga gccggtcatc aagtgtgtgg atctagtcgt acaggaactt 1561 tctgtggttg tgcgcatgtg cacatctaaa atgagtcgat acccacgtct gcgcgaggag 1621 accgaacgca ttatcaccac gcatgttcgc caacgcgagc acagctgcaa ggaacagatc 1681 ctcctgctga ttgactttga gctggcctac atgaacacca accatgagga cttcattggt 1741 ttcgccaacg ctcaaaataa atctgaaaat gccaataaaa ctggcacgcg tcagcttggc 1801 aaccaagtta tacgtaaggg gcacatggtc atacagaacc ttggtatcat gaaaggtgga 1861 tcgcgtccct attggtttgt gttgacttcc gagagtatct cctggtacaa ggacgaggat 1921 gagaaggaga agaagttcat gctgccgttg gatggtttaa aattgcggga tattgaacag 1981 ggatttatgt caatgtctag acgtgttaca tttgctttat ttagtcccga tggacgtaat 2041 gtttataagg actacaaaca actggagctg tcgtgcgaga ccgtggagga tgtggagtcc 2101 tggaaagcct ccttcctgcg ggctggtgtc tatcccgaga agcaggagac ccaggagaac 2161 ggggatgagg aaggacaaga gtcggccagc gaggagagtt ccaccgatcc acagttggag 2221 cggcaggttg agaccatccg caatctggtg gactcgtaca tgaagatcgt gaccaagacc 2281 acgcgagaca tggtgcccaa ggcgattatg atgctaataa taaacaacgc caaggacttt 2341 atcaacgggg agcttctggc acatctctat gcgtctggtg atcagtccca gatgatggaa 2401 gagtccgccg agtcggccac gcgacgagag gagatgctgc gtatgtaccg tgcttgcaag 2461 gatgctctgc agatcatagg cgacgtatcc atggccactg tgtcctcgcc attgcctccg 2521 ccggttaaga acgattggct acccagtggc ttggacaacc cacgtctctc ccctccgagt 2581 ccgggtggag cccgaggtaa accaggacct cccgcacaga gcgccttagg tggacggaac 2641 ccaccattgc caccagcaac aggccgcccg gctccagcga ttccgaatcg cccaggaggt 2701 ggggcaccac cgctacccgg cggtcgtcct ggaggagctc tgcccccacc aatgttacca 2761 tcccgtgtca ctggatccgt cggcggtgcc attgtccagc agtcgggggc caatcgatat 2821 gttccggaga gtatgcgtgg acaggttaac caggccgttg gccaggcggc catcaatgaa 2881 ctatcccacg cctttagttc ccgattcaag taatgcaagc aaaattaagc acaatatgca 2941 gagtatgcaa attatttacc gacaaaatag caaacactta cgcgtcatca tatcaccatc 3001 caccattcaa aatcaaagaa gtataacaca aatcaaagct ttcaagatgt ctgttggttt 3061 taaatctatg gaaaaattca gcggagtgtc acaagatcct tggatatttc ccacatacaa 3121 attattgctt tcgaattgat ttcatcatgg aacatttact tttaaaagta tatttaaacg 3181 tgaaataaat aaaattattt tccaaaatga gtatttatga ataaatgtat gtatgtaaag 3241 cga