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LOCUS XM_070219346 3224 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_070219346 VERSION XM_070219346.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3224 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3224 /gene="shi" /note="dynamin-1 shibire; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins" /db_xref="GeneID:108056704" CDS 249..2894 /gene="shi" /codon_start=1 /product="dynamin isoform X1" /protein_id="XP_070075447.1" /db_xref="GeneID:108056704" /translation="MDNLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLE NFVGKDFLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDR VTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIR KETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENK LLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLGTPYLQRVL NQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSD FERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIH GIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTSKMSRYPRLRE ETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTR QLGNQVIRKGHMVIQNLGIMKGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKL RDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPE KQETQENGDEEGQESASEESSTDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMM LIINNAKDFINGELLAHLYASGDQSQMMEESAESATRREEMLRMYRACKDALQIIGDV SMATVSSPLPPPVKNDWLPSGLDNPRLSPPSPGGARGKPGPPAQSALGGRNPPLPPAT GRPAPAIPNRPGGGAPPLPGGRPGGALPPPMLPSRVTGSVGGAIVQQSGANRYVPESM RGQVNQAVGQAAINELSHAFSSRFK" misc_feature 249..968 /gene="shi" /note="Dynamin, GTPase; Region: DYNc; smart00053" /db_xref="CDD:197491" misc_feature 345..368 /gene="shi" /note="G1 box; other site" /db_xref="CDD:206738" misc_feature order(348..350,354..371,408..413,426..428,639..641, 849..851,855..860,936..950,957..959) /gene="shi" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206738" misc_feature order(351..356,651..653,690..692,765..767,771..773, 777..788,792..797,858..860,864..875,945..953) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:206738" misc_feature 426..428 /gene="shi" /note="G2 box; other site" /db_xref="CDD:206738" misc_feature 438..446 /gene="shi" /note="Switch I region; other site" /db_xref="CDD:206738" misc_feature 639..650 /gene="shi" /note="G3 box; other site" /db_xref="CDD:206738" misc_feature order(645..650,738..743) /gene="shi" /note="Switch II region; other site" /db_xref="CDD:206738" misc_feature 846..857 /gene="shi" /note="G4 box; other site" /db_xref="CDD:206738" misc_feature 876..1742 /gene="shi" /note="Dynamin central region; Region: Dynamin_M; pfam01031" /db_xref="CDD:460033" misc_feature 936..944 /gene="shi" /note="G5 box; other site" /db_xref="CDD:206738" misc_feature 1782..2123 /gene="shi" /note="Dynamin pleckstrin homology (PH) domain; Region: PH_dynamin; cd01256" /db_xref="CDD:269958" misc_feature order(1788..1790,1794..1799,1803..1805,1854..1856, 2067..2072,2079..2081,2088..2093,2100..2102) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:269958" misc_feature 2193..2468 /gene="shi" /note="Dynamin GTPase effector domain; Region: GED; smart00302" /db_xref="CDD:128597" misc_feature 2376..>2768 /gene="shi" /note="Fibronectin-attachment protein (FAP); Region: FAP; pfam07174" /db_xref="CDD:429334" polyA_site 3224 /gene="shi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgaatcagcc agattatgat tgccttttgg catctctagt tttagtcgaa aaaattcatt 61 gaaacagttt ggagtggtgg agtgtggtga tagtctaatt gcagaggagt gcagtgcaga 121 aaacccagag atcagagatc agaacacaag ccacccgggg acgagtcaga gtcaggatcg 181 cagttcgatc cgagagccta atctaatccg attgcgagag accccatcca catccagaac 241 ttgccgcaat ggataaccta atcacgattg taaacaagct gcaggatgcg ttcacatcgc 301 tcggcgtcca tatgcagttg gatctgccgc agatcgcggt ggtcggtggc caatcagctg 361 gcaagagttc tgttctggag aacttcgttg gcaaagattt cttgcctcgt ggctctggta 421 tcgtgactcg aagaccttta atattgcaac tgatcaatgg agtcaccgaa tacggagagt 481 tccttcacat taaaggcaaa aagttctcga gcttcgatga gatcagaaaa gaaatcgaag 541 atgagacgga tcgtgtgacc ggcagcaaca aaggcatttc aaacattcca attaatttgc 601 gcgtctactc gccgcacgta ctcaatctaa ctctgatcga tttgccgggc ctgacgaagg 661 tggcaattgg cgatcagccg gtggacattg agcagcaaat taagcagatg atattccaat 721 ttattcgcaa agagacttgc ttgattctgg ccgttacgcc ggccaacacg gatctggcca 781 actcggatgc tctgaagctg gccaaggagg tggatccgca gggtgtgcgc accatcggcg 841 tgataaccaa gctggatctg atggacgagg gcaccgatgc ccgggacatt ctggagaaca 901 agctgctacc gctgcggcgg ggctatattg gtgtggtcaa tcgatcgcag aaggacatcg 961 aggggcgcaa ggacatccac caggcgctcg ccgccgagcg caagttcttc ttgagccacc 1021 cctcgtaccg tcacatggcc gatcgtctcg gaacccccta cttgcagcgg gtcctcaatc 1081 agcagctcac caaccacatt cgggacacgt tgcccggcct gcgggacaag ttgcagaagc 1141 agatgctcac tttggagaag gaggtggagg agttcaagca cttccagccg ggcgatgcca 1201 gcatcaagac aaaggctatg ctccaaatga ttcagcagct gcagtcggac tttgagcgaa 1261 ccatcgaggg cagcggctcg gccttggtca atacaaatga gctctcgggc ggcgccaaga 1321 tcaatcgcat tttccacgaa cgtctgcgct tcgagatcgt caagatggcc tgcgacgaga 1381 aggaactgcg gcgagagatc tcattcgcta tccggaacat tcacggcatt cgcgtgggcc 1441 tcttcacacc cgacatggcg ttcgaggcga ttgtcaagag gcagatagcg ctgctcaagg 1501 agccggtcat caagtgtgtg gatctagtcg tacaggaact ttctgtggtt gtgcgcatgt 1561 gcacatctaa aatgagtcga tacccacgtc tgcgcgagga gaccgaacgc attatcacca 1621 cgcatgttcg ccaacgcgag cacagctgca aggaacagat cctcctgctg attgactttg 1681 agctggccta catgaacacc aaccatgagg acttcattgg tttcgccaac gctcaaaata 1741 aatctgaaaa tgccaataaa actggcacgc gtcagcttgg caaccaagtt atacgtaagg 1801 ggcacatggt catacagaac cttggtatca tgaaaggtgg atcgcgtccc tattggtttg 1861 tgttgacttc cgagagtatc tcctggtaca aggacgagga tgagaaggag aagaagttca 1921 tgctgccgtt ggatggttta aaattgcggg atattgaaca gggatttatg tcaatgtcta 1981 gacgtgttac atttgcttta tttagtcccg atggacgtaa tgtttataag gactacaaac 2041 aactggagct gtcgtgcgag accgtggagg atgtggagtc ctggaaagcc tccttcctgc 2101 gggctggtgt ctatcccgag aagcaggaga cccaggagaa cggggatgag gaaggacaag 2161 agtcggccag cgaggagagt tccaccgatc cacagttgga gcggcaggtt gagaccatcc 2221 gcaatctggt ggactcgtac atgaagatcg tgaccaagac cacgcgagac atggtgccca 2281 aggcgattat gatgctaata ataaacaacg ccaaggactt tatcaacggg gagcttctgg 2341 cacatctcta tgcgtctggt gatcagtccc agatgatgga agagtccgcc gagtcggcca 2401 cgcgacgaga ggagatgctg cgtatgtacc gtgcttgcaa ggatgctctg cagatcatag 2461 gcgacgtatc catggccact gtgtcctcgc cattgcctcc gccggttaag aacgattggc 2521 tacccagtgg cttggacaac ccacgtctct cccctccgag tccgggtgga gcccgaggta 2581 aaccaggacc tcccgcacag agcgccttag gtggacggaa cccaccattg ccaccagcaa 2641 caggccgccc ggctccagcg attccgaatc gcccaggagg tggggcacca ccgctacccg 2701 gcggtcgtcc tggaggagct ctgcccccac caatgttacc atcccgtgtc actggatccg 2761 tcggcggtgc cattgtccag cagtcggggg ccaatcgata tgttccggag agtatgcgtg 2821 gacaggttaa ccaggccgtt ggccaggcgg ccatcaatga actatcccac gcctttagtt 2881 cccgattcaa gtaatgcaag caaaattaag cacaatatgc agagtatgca aattatttac 2941 cgacaaaata gcaaacactt acgcgtcatc atatcaccat ccaccattca aaatcaaaga 3001 agtataacac aaatcaaagc tttcaagatg tctgttggtt ttaaatctat ggaaaaattc 3061 agcggagtgt cacaagatcc ttggatattt cccacataca aattattgct ttcgaattga 3121 tttcatcatg gaacatttac ttttaaaagt atatttaaac gtgaaataaa taaaattatt 3181 ttccaaaatg agtatttatg aataaatgta tgtatgtaaa gcga