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LOCUS XM_070219345 3354 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_070219345 VERSION XM_070219345.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3354 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3354 /gene="shi" /note="dynamin-1 shibire; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins" /db_xref="GeneID:108056704" CDS 379..3024 /gene="shi" /codon_start=1 /product="dynamin isoform X1" /protein_id="XP_070075446.1" /db_xref="GeneID:108056704" /translation="MDNLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLE NFVGKDFLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDR VTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIR KETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENK LLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLGTPYLQRVL NQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSD FERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIH GIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTSKMSRYPRLRE ETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTR QLGNQVIRKGHMVIQNLGIMKGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKL RDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPE KQETQENGDEEGQESASEESSTDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMM LIINNAKDFINGELLAHLYASGDQSQMMEESAESATRREEMLRMYRACKDALQIIGDV SMATVSSPLPPPVKNDWLPSGLDNPRLSPPSPGGARGKPGPPAQSALGGRNPPLPPAT GRPAPAIPNRPGGGAPPLPGGRPGGALPPPMLPSRVTGSVGGAIVQQSGANRYVPESM RGQVNQAVGQAAINELSHAFSSRFK" misc_feature 379..1098 /gene="shi" /note="Dynamin, GTPase; Region: DYNc; smart00053" /db_xref="CDD:197491" misc_feature 475..498 /gene="shi" /note="G1 box; other site" /db_xref="CDD:206738" misc_feature order(478..480,484..501,538..543,556..558,769..771, 979..981,985..990,1066..1080,1087..1089) /gene="shi" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206738" misc_feature order(481..486,781..783,820..822,895..897,901..903, 907..918,922..927,988..990,994..1005,1075..1083) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:206738" misc_feature 556..558 /gene="shi" /note="G2 box; other site" /db_xref="CDD:206738" misc_feature 568..576 /gene="shi" /note="Switch I region; other site" /db_xref="CDD:206738" misc_feature 769..780 /gene="shi" /note="G3 box; other site" /db_xref="CDD:206738" misc_feature order(775..780,868..873) /gene="shi" /note="Switch II region; other site" /db_xref="CDD:206738" misc_feature 976..987 /gene="shi" /note="G4 box; other site" /db_xref="CDD:206738" misc_feature 1006..1872 /gene="shi" /note="Dynamin central region; Region: Dynamin_M; pfam01031" /db_xref="CDD:460033" misc_feature 1066..1074 /gene="shi" /note="G5 box; other site" /db_xref="CDD:206738" misc_feature 1912..2253 /gene="shi" /note="Dynamin pleckstrin homology (PH) domain; Region: PH_dynamin; cd01256" /db_xref="CDD:269958" misc_feature order(1918..1920,1924..1929,1933..1935,1984..1986, 2197..2202,2209..2211,2218..2223,2230..2232) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:269958" misc_feature 2323..2598 /gene="shi" /note="Dynamin GTPase effector domain; Region: GED; smart00302" /db_xref="CDD:128597" misc_feature 2506..>2898 /gene="shi" /note="Fibronectin-attachment protein (FAP); Region: FAP; pfam07174" /db_xref="CDD:429334" polyA_site 3354 /gene="shi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaattcatt gaaacagttt ggagtggtgg agtgtggtga tagtcgtcag tttgcacaat 61 aagaatattt gctaaagaca gccccaaatt gttaatgtta atctagctgt gcgtggggcg 121 atggacatga catgaacaca aacactacac tgttacgcct gagactgaga accgagaagc 181 gaaggaggat tggaaaagtc gatgataatt cccatttcct tggcataatt gcagaggagt 241 gcagtgcaga aaacccagag atcagagatc agaacacaag ccacccgggg acgagtcaga 301 gtcaggatcg cagttcgatc cgagagccta atctaatccg attgcgagag accccatcca 361 catccagaac ttgccgcaat ggataaccta atcacgattg taaacaagct gcaggatgcg 421 ttcacatcgc tcggcgtcca tatgcagttg gatctgccgc agatcgcggt ggtcggtggc 481 caatcagctg gcaagagttc tgttctggag aacttcgttg gcaaagattt cttgcctcgt 541 ggctctggta tcgtgactcg aagaccttta atattgcaac tgatcaatgg agtcaccgaa 601 tacggagagt tccttcacat taaaggcaaa aagttctcga gcttcgatga gatcagaaaa 661 gaaatcgaag atgagacgga tcgtgtgacc ggcagcaaca aaggcatttc aaacattcca 721 attaatttgc gcgtctactc gccgcacgta ctcaatctaa ctctgatcga tttgccgggc 781 ctgacgaagg tggcaattgg cgatcagccg gtggacattg agcagcaaat taagcagatg 841 atattccaat ttattcgcaa agagacttgc ttgattctgg ccgttacgcc ggccaacacg 901 gatctggcca actcggatgc tctgaagctg gccaaggagg tggatccgca gggtgtgcgc 961 accatcggcg tgataaccaa gctggatctg atggacgagg gcaccgatgc ccgggacatt 1021 ctggagaaca agctgctacc gctgcggcgg ggctatattg gtgtggtcaa tcgatcgcag 1081 aaggacatcg aggggcgcaa ggacatccac caggcgctcg ccgccgagcg caagttcttc 1141 ttgagccacc cctcgtaccg tcacatggcc gatcgtctcg gaacccccta cttgcagcgg 1201 gtcctcaatc agcagctcac caaccacatt cgggacacgt tgcccggcct gcgggacaag 1261 ttgcagaagc agatgctcac tttggagaag gaggtggagg agttcaagca cttccagccg 1321 ggcgatgcca gcatcaagac aaaggctatg ctccaaatga ttcagcagct gcagtcggac 1381 tttgagcgaa ccatcgaggg cagcggctcg gccttggtca atacaaatga gctctcgggc 1441 ggcgccaaga tcaatcgcat tttccacgaa cgtctgcgct tcgagatcgt caagatggcc 1501 tgcgacgaga aggaactgcg gcgagagatc tcattcgcta tccggaacat tcacggcatt 1561 cgcgtgggcc tcttcacacc cgacatggcg ttcgaggcga ttgtcaagag gcagatagcg 1621 ctgctcaagg agccggtcat caagtgtgtg gatctagtcg tacaggaact ttctgtggtt 1681 gtgcgcatgt gcacatctaa aatgagtcga tacccacgtc tgcgcgagga gaccgaacgc 1741 attatcacca cgcatgttcg ccaacgcgag cacagctgca aggaacagat cctcctgctg 1801 attgactttg agctggccta catgaacacc aaccatgagg acttcattgg tttcgccaac 1861 gctcaaaata aatctgaaaa tgccaataaa actggcacgc gtcagcttgg caaccaagtt 1921 atacgtaagg ggcacatggt catacagaac cttggtatca tgaaaggtgg atcgcgtccc 1981 tattggtttg tgttgacttc cgagagtatc tcctggtaca aggacgagga tgagaaggag 2041 aagaagttca tgctgccgtt ggatggttta aaattgcggg atattgaaca gggatttatg 2101 tcaatgtcta gacgtgttac atttgcttta tttagtcccg atggacgtaa tgtttataag 2161 gactacaaac aactggagct gtcgtgcgag accgtggagg atgtggagtc ctggaaagcc 2221 tccttcctgc gggctggtgt ctatcccgag aagcaggaga cccaggagaa cggggatgag 2281 gaaggacaag agtcggccag cgaggagagt tccaccgatc cacagttgga gcggcaggtt 2341 gagaccatcc gcaatctggt ggactcgtac atgaagatcg tgaccaagac cacgcgagac 2401 atggtgccca aggcgattat gatgctaata ataaacaacg ccaaggactt tatcaacggg 2461 gagcttctgg cacatctcta tgcgtctggt gatcagtccc agatgatgga agagtccgcc 2521 gagtcggcca cgcgacgaga ggagatgctg cgtatgtacc gtgcttgcaa ggatgctctg 2581 cagatcatag gcgacgtatc catggccact gtgtcctcgc cattgcctcc gccggttaag 2641 aacgattggc tacccagtgg cttggacaac ccacgtctct cccctccgag tccgggtgga 2701 gcccgaggta aaccaggacc tcccgcacag agcgccttag gtggacggaa cccaccattg 2761 ccaccagcaa caggccgccc ggctccagcg attccgaatc gcccaggagg tggggcacca 2821 ccgctacccg gcggtcgtcc tggaggagct ctgcccccac caatgttacc atcccgtgtc 2881 actggatccg tcggcggtgc cattgtccag cagtcggggg ccaatcgata tgttccggag 2941 agtatgcgtg gacaggttaa ccaggccgtt ggccaggcgg ccatcaatga actatcccac 3001 gcctttagtt cccgattcaa gtaatgcaag caaaattaag cacaatatgc agagtatgca 3061 aattatttac cgacaaaata gcaaacactt acgcgtcatc atatcaccat ccaccattca 3121 aaatcaaaga agtataacac aaatcaaagc tttcaagatg tctgttggtt ttaaatctat 3181 ggaaaaattc agcggagtgt cacaagatcc ttggatattt cccacataca aattattgct 3241 ttcgaattga tttcatcatg gaacatttac ttttaaaagt atatttaaac gtgaaataaa 3301 taaaattatt ttccaaaatg agtatttatg aataaatgta tgtatgtaaa gcga