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LOCUS XM_070219344 3377 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_070219344 VERSION XM_070219344.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3377 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3377 /gene="shi" /note="dynamin-1 shibire; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins" /db_xref="GeneID:108056704" CDS 402..3047 /gene="shi" /codon_start=1 /product="dynamin isoform X1" /protein_id="XP_070075445.1" /db_xref="GeneID:108056704" /translation="MDNLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLE NFVGKDFLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDR VTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIR KETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENK LLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLGTPYLQRVL NQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSD FERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIH GIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTSKMSRYPRLRE ETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTR QLGNQVIRKGHMVIQNLGIMKGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKL RDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPE KQETQENGDEEGQESASEESSTDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMM LIINNAKDFINGELLAHLYASGDQSQMMEESAESATRREEMLRMYRACKDALQIIGDV SMATVSSPLPPPVKNDWLPSGLDNPRLSPPSPGGARGKPGPPAQSALGGRNPPLPPAT GRPAPAIPNRPGGGAPPLPGGRPGGALPPPMLPSRVTGSVGGAIVQQSGANRYVPESM RGQVNQAVGQAAINELSHAFSSRFK" misc_feature 402..1121 /gene="shi" /note="Dynamin, GTPase; Region: DYNc; smart00053" /db_xref="CDD:197491" misc_feature 498..521 /gene="shi" /note="G1 box; other site" /db_xref="CDD:206738" misc_feature order(501..503,507..524,561..566,579..581,792..794, 1002..1004,1008..1013,1089..1103,1110..1112) /gene="shi" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206738" misc_feature order(504..509,804..806,843..845,918..920,924..926, 930..941,945..950,1011..1013,1017..1028,1098..1106) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:206738" misc_feature 579..581 /gene="shi" /note="G2 box; other site" /db_xref="CDD:206738" misc_feature 591..599 /gene="shi" /note="Switch I region; other site" /db_xref="CDD:206738" misc_feature 792..803 /gene="shi" /note="G3 box; other site" /db_xref="CDD:206738" misc_feature order(798..803,891..896) /gene="shi" /note="Switch II region; other site" /db_xref="CDD:206738" misc_feature 999..1010 /gene="shi" /note="G4 box; other site" /db_xref="CDD:206738" misc_feature 1029..1895 /gene="shi" /note="Dynamin central region; Region: Dynamin_M; pfam01031" /db_xref="CDD:460033" misc_feature 1089..1097 /gene="shi" /note="G5 box; other site" /db_xref="CDD:206738" misc_feature 1935..2276 /gene="shi" /note="Dynamin pleckstrin homology (PH) domain; Region: PH_dynamin; cd01256" /db_xref="CDD:269958" misc_feature order(1941..1943,1947..1952,1956..1958,2007..2009, 2220..2225,2232..2234,2241..2246,2253..2255) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:269958" misc_feature 2346..2621 /gene="shi" /note="Dynamin GTPase effector domain; Region: GED; smart00302" /db_xref="CDD:128597" misc_feature 2529..>2921 /gene="shi" /note="Fibronectin-attachment protein (FAP); Region: FAP; pfam07174" /db_xref="CDD:429334" polyA_site 3377 /gene="shi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaattcatt gaaacagttt ggagtggtgg agtgtggtga tagtcgtcag tttgcacaat 61 aagaatattt gctaaagaca gccccaaatt gttaatgtta atctagctgt gcgtggggcg 121 atggacatga catgaacaca aacactacac tgttacgcct gagactgaga accgagaagc 181 gaaggaggat tggaaaagtc gatgataatt cccatttcct tggcagtata tatacaaatt 241 ctttttgtta attgcagagg agtgcagtgc agaaaaccca gagatcagag atcagaacac 301 aagccacccg gggacgagtc agagtcagga tcgcagttcg atccgagagc ctaatctaat 361 ccgattgcga gagaccccat ccacatccag aacttgccgc aatggataac ctaatcacga 421 ttgtaaacaa gctgcaggat gcgttcacat cgctcggcgt ccatatgcag ttggatctgc 481 cgcagatcgc ggtggtcggt ggccaatcag ctggcaagag ttctgttctg gagaacttcg 541 ttggcaaaga tttcttgcct cgtggctctg gtatcgtgac tcgaagacct ttaatattgc 601 aactgatcaa tggagtcacc gaatacggag agttccttca cattaaaggc aaaaagttct 661 cgagcttcga tgagatcaga aaagaaatcg aagatgagac ggatcgtgtg accggcagca 721 acaaaggcat ttcaaacatt ccaattaatt tgcgcgtcta ctcgccgcac gtactcaatc 781 taactctgat cgatttgccg ggcctgacga aggtggcaat tggcgatcag ccggtggaca 841 ttgagcagca aattaagcag atgatattcc aatttattcg caaagagact tgcttgattc 901 tggccgttac gccggccaac acggatctgg ccaactcgga tgctctgaag ctggccaagg 961 aggtggatcc gcagggtgtg cgcaccatcg gcgtgataac caagctggat ctgatggacg 1021 agggcaccga tgcccgggac attctggaga acaagctgct accgctgcgg cggggctata 1081 ttggtgtggt caatcgatcg cagaaggaca tcgaggggcg caaggacatc caccaggcgc 1141 tcgccgccga gcgcaagttc ttcttgagcc acccctcgta ccgtcacatg gccgatcgtc 1201 tcggaacccc ctacttgcag cgggtcctca atcagcagct caccaaccac attcgggaca 1261 cgttgcccgg cctgcgggac aagttgcaga agcagatgct cactttggag aaggaggtgg 1321 aggagttcaa gcacttccag ccgggcgatg ccagcatcaa gacaaaggct atgctccaaa 1381 tgattcagca gctgcagtcg gactttgagc gaaccatcga gggcagcggc tcggccttgg 1441 tcaatacaaa tgagctctcg ggcggcgcca agatcaatcg cattttccac gaacgtctgc 1501 gcttcgagat cgtcaagatg gcctgcgacg agaaggaact gcggcgagag atctcattcg 1561 ctatccggaa cattcacggc attcgcgtgg gcctcttcac acccgacatg gcgttcgagg 1621 cgattgtcaa gaggcagata gcgctgctca aggagccggt catcaagtgt gtggatctag 1681 tcgtacagga actttctgtg gttgtgcgca tgtgcacatc taaaatgagt cgatacccac 1741 gtctgcgcga ggagaccgaa cgcattatca ccacgcatgt tcgccaacgc gagcacagct 1801 gcaaggaaca gatcctcctg ctgattgact ttgagctggc ctacatgaac accaaccatg 1861 aggacttcat tggtttcgcc aacgctcaaa ataaatctga aaatgccaat aaaactggca 1921 cgcgtcagct tggcaaccaa gttatacgta aggggcacat ggtcatacag aaccttggta 1981 tcatgaaagg tggatcgcgt ccctattggt ttgtgttgac ttccgagagt atctcctggt 2041 acaaggacga ggatgagaag gagaagaagt tcatgctgcc gttggatggt ttaaaattgc 2101 gggatattga acagggattt atgtcaatgt ctagacgtgt tacatttgct ttatttagtc 2161 ccgatggacg taatgtttat aaggactaca aacaactgga gctgtcgtgc gagaccgtgg 2221 aggatgtgga gtcctggaaa gcctccttcc tgcgggctgg tgtctatccc gagaagcagg 2281 agacccagga gaacggggat gaggaaggac aagagtcggc cagcgaggag agttccaccg 2341 atccacagtt ggagcggcag gttgagacca tccgcaatct ggtggactcg tacatgaaga 2401 tcgtgaccaa gaccacgcga gacatggtgc ccaaggcgat tatgatgcta ataataaaca 2461 acgccaagga ctttatcaac ggggagcttc tggcacatct ctatgcgtct ggtgatcagt 2521 cccagatgat ggaagagtcc gccgagtcgg ccacgcgacg agaggagatg ctgcgtatgt 2581 accgtgcttg caaggatgct ctgcagatca taggcgacgt atccatggcc actgtgtcct 2641 cgccattgcc tccgccggtt aagaacgatt ggctacccag tggcttggac aacccacgtc 2701 tctcccctcc gagtccgggt ggagcccgag gtaaaccagg acctcccgca cagagcgcct 2761 taggtggacg gaacccacca ttgccaccag caacaggccg cccggctcca gcgattccga 2821 atcgcccagg aggtggggca ccaccgctac ccggcggtcg tcctggagga gctctgcccc 2881 caccaatgtt accatcccgt gtcactggat ccgtcggcgg tgccattgtc cagcagtcgg 2941 gggccaatcg atatgttccg gagagtatgc gtggacaggt taaccaggcc gttggccagg 3001 cggccatcaa tgaactatcc cacgccttta gttcccgatt caagtaatgc aagcaaaatt 3061 aagcacaata tgcagagtat gcaaattatt taccgacaaa atagcaaaca cttacgcgtc 3121 atcatatcac catccaccat tcaaaatcaa agaagtataa cacaaatcaa agctttcaag 3181 atgtctgttg gttttaaatc tatggaaaaa ttcagcggag tgtcacaaga tccttggata 3241 tttcccacat acaaattatt gctttcgaat tgatttcatc atggaacatt tacttttaaa 3301 agtatattta aacgtgaaat aaataaaatt attttccaaa atgagtattt atgaataaat 3361 gtatgtatgt aaagcga