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LOCUS XM_070219342 2732 bp mRNA linear INV 09-DEC-2024 (Dlic), transcript variant X3, mRNA. ACCESSION XM_070219342 VERSION XM_070219342.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2732 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2732 /gene="Dlic" /note="dynein light intermediate chain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108068630" CDS 406..1935 /gene="Dlic" /codon_start=1 /product="cytoplasmic dynein 1 light intermediate chain 1 isoform X1" /protein_id="XP_070075443.1" /db_xref="GeneID:108068630" /translation="MALDSGTQTNALTSSFTTKKKDAAAEKENLWSAILNEVQTQGST KLPSNKSVLVLGDNATGKTTLIAKLQGVEDPKKGSGLEYAYIDVKDEYRDDMTRLGVW VLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHIESLQL EAKEKEAARQRLATTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALITNL GLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTSLFYTSVKEDKNCD LLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKISILYENMHGVKAENPYTDI IKSPPTRKAVSNREAEVQTEDEQAFLARQQEILKQGDQVRGESPLRSQGVGSNKSGPR TPGTTGQSSPKKIDPKLTPATPGAEGVLANFFNSLLHKKSGSPAGGGPGGAGSPAGPG GRTANGGTDAMMTPEKLAVRTDAAAELDRLSRSVKKEIDMSQNLRRYPLKKRDSCTSP F" misc_feature 478..1878 /gene="Dlic" /note="Dynein light intermediate chain (DLIC); Region: DLIC; pfam05783" /db_xref="CDD:368612" polyA_site 2732 /gene="Dlic" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccatcgctgc tccaccacta ccgcacggtc acactgctcc tgtcgtacaa aatatttttt 61 cccagcgaaa aaactgaatt tcctcgctcg cgttgatatt tttttgttat tttttgtcgg 121 ccacaattgg agcgatcgaa aggaggccca gcggacgtgc gtgaaaatcc agggccgcga 181 gttttcaccg gagagcgaag agcgtgagaa actgcgtacg tacgaaagga aaaaagtggg 241 caacccaaaa aagaaagacg gaaaagagag agaagagaaa aaaatttgcg aattcgaatt 301 tgtcagcagc tcacatcccg attcccaatt ggacccgagc aggagtggag agcgttccaa 361 taggagtact gcagcagcaa caacaacaac aacaacaaca acaacatggc actggacagt 421 gggacgcaaa cgaatgcgct gacatcatcc ttcaccacca agaaaaagga tgcggccgcg 481 gaaaaggaga acctatggtc ggcgatattg aatgaagtac aaacacaggg cagcacaaaa 541 cttccatcaa acaaatctgt actagtatta ggcgacaatg ccaccggaaa gaccacactc 601 atagccaaac tgcagggcgt cgaggatccg aagaagggtt ccggcctgga gtatgcctac 661 atcgatgtga aggacgagta cagagacgac atgacgcgtt tgggcgtttg ggtcctggac 721 ggcgatccag gacacacaaa cctgctgcac tatgcgctca atgaaacgaa ctatgcacac 781 accctcgtca tcctcaccgt ttcgatgacg cagccgtggg gctggctgga gcagctgaat 841 cactggatca aggtactcgg ccagcacatc gagagcctgc agctggaggc caaagagaag 901 gaggcggccc gccagcggct ggccaccacg tggcagagct actgcgaggt gggcgacgac 961 ctggatccgg gctccccggt caagcggacg atgcgcaaca actcgatcga cgaggacgac 1021 ctgctgccgc tgacggagga cgcactaatt acaaatctgg gcctggacat cgtggtggtg 1081 gtcacaaaga cggactacat gaccactttg gagaaggagt acgagtatcg cgacgagcac 1141 ttcgacttca tccagcagtg gatacgcaac ttctgcctgc ggcacggcac ctcgctcttc 1201 tacacgagcg tcaaagaaga caaaaactgt gatctcctct acaaatatct gacgcatcga 1261 atttatggtc tgccattccg tacgccagcg ctagtcgttg agaaggatgc ggtactcatt 1321 ccggctggct gggatagcct gaaaaagatt agtattctgt acgagaacat gcacggagtc 1381 aaggccgaga atccctacac agacatcatc aaatcgccgc caactagaaa ggcggtttcc 1441 aatcgcgagg cagaagtgca gacggaggac gagcaggcct tcctggctcg ccagcaggag 1501 atcctcaagc agggcgacca ggtgcgcggg gaatcgccgc tgcgatcgca gggcgtgggc 1561 agcaacaaga gcggaccccg aacgcccggc accacgggac agagttcgcc caagaagatt 1621 gatcccaaac tgacgccagc cacgcccggc gccgagggcg ttctggccaa cttcttcaac 1681 tcgctgctac acaaaaagtc cggcagtccg gcgggcggcg gccccggcgg agctggcagt 1741 ccggcgggac cgggaggccg cacggccaac ggcggaacgg atgcaatgat gacgcccgag 1801 aagctggccg tgcgcacgga tgcggccgcc gagctggatc gattgtcgcg cagcgtgaag 1861 aaggagatcg acatgtcgca gaacctccgt cgttatccgc tcaagaaacg agacagctgt 1921 acgtctccat tttaaaggaa gtttttattt aagccatttt aataccgagc gtgtctgaat 1981 caagaaatca agataataga gctgttcggc ccaggcgatt tatattctat tttattatga 2041 tttattcgaa tcgagaagac gctttctttt tgccatatgt attccaccaa atgtatgtat 2101 gctcttctca tcgggagatt taatttccac agctttctta aacccctaat ctatttcttt 2161 tctttctgtc ccactctttg cctctcgctc tttgccgtgt gtcgtcagaa gcaaccacaa 2221 aaatttgata aaccagaaaa taaaaacgaa aaattaaaat gtgctacaga aactattttt 2281 atgtataaat acaaaataat tatatgaaat atattgtata acattatata tatatttaaa 2341 tcagagcaaa ttaaaaatat tgtgcaagcg aattatttaa acaaattgat cggtattcga 2401 aaactcccaa caaagaacaa agctgaaaaa cacacacaaa tataaattaa tgtaaattaa 2461 aacccaaaaa aatataggca tcaaatcagc gtcaaaaact gcaacaaaaa agtgaaataa 2521 tttaaataaa attttccaaa aacacaaaaa aaattaaatt actgaaacag ttgttttatt 2581 ttgaaggggg attggattag aaataactga agtttaaatt tttcaacgaa attgtttgtt 2641 taaatttaat ttcattcttt cggaaaacat aaaaaaaaaa aaattaagtc agaaattgac 2701 ggggattaac ttattagttt agctgtgaaa aa