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LOCUS XM_070219307 4438 bp mRNA linear INV 09-DEC-2024 X2, mRNA. ACCESSION XM_070219307 VERSION XM_070219307.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4438 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4438 /gene="X11L" /note="X11L; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056729" CDS 153..3581 /gene="X11L" /codon_start=1 /product="uncharacterized protein X11L isoform X1" /protein_id="XP_070075408.1" /db_xref="GeneID:108056729" /translation="MNLSNSCSDSSNESMVNPMQQQQQQERYVWEMRTRSPNVTPAST VLNSPDLNAELSYVPLQGLSPTSGGGGNGGGGTGGQGAARDSSNYYYQRPHLHQIRLG RSPGSQFETRDVLPQGLASPGSPTDVGKADGQCLRDGEIVVFDDIDTNWMNKPSSGGH RTPGSNEDVLKVTKMIGQLPIAEYEGSPRRFGSQTNAGGAPPPRKRPPGFPQRVSPTT SGVNNATASAKASVGNLIDLIDHEEEKTPTFDYLYEFSETRKVLEEFFKANPEDYAAE SGDDIASSQQQEYPATPMEQAYIGQRLARIPKDELYMVHRSPIKKPPNDQNPATAYQE HNDIELYIDSNSRSSGDLADTELEANLRRHSRNFTLSPETTDYDSNCGDLDSLSNDIN CPTDYGKLYTSMPVLEDGLSSGHASDTENNVSVVCDQKQSSQSQFQPVHEHNGNGERL ENGDYNVMSASMATLTTDASQSALISDFASLPMPPAPAPVPPPSSSSPPQIEIADASE SMAMAAEADNPLDSHYGAVYAAALTEKSTALPSQAASEIQEAMKEIRSALQRAKTQPE KLKFCDEVLPTDPDSPVWVPRKTTAVSVAQAAATAADEEPDTDLETDRLLGQQRHDEQ DFFADQQLADSNANEGTEIASNGHLNGMAVDNNNPNPNPMGNAKPQTYSTATIRQGIG TSLTPNSPDICQIVGTADISISSPEKLQFSKSPTGSIKSLKDSANSDKKAKSRNKEGL LEPKVLIEGVLFRARYLGSTQLVCEGQPTKSTRMMQAEEAVSRIKAPEGESQPSTEVD LFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVVDPATASP LGDPLPSAAAAGMGESDESPPKEQALSKHNRTPKMICHVFESDEAQFIAQSIGQAFQV AYMEFLKANGIENESLAKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEIL GVVIVESGWGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGMSLVGLPLSTCQSY IRNAKNQTAVKFTVVPCPPVVEVKILRPKALFQLGFSVQNGVICSLLRGGIAERGGVR VGHRIIEINNQSVVAVPHDTIVKLLSSSVGEILMKTMPTSMFRLLTGQETPIYI" misc_feature 2379..2930 /gene="X11L" /note="X11-like Phosphotyrosine-binding (PTB) domain; Region: PTB_X11; cd01208" /db_xref="CDD:269919" misc_feature order(2415..2417,2649..2651,2841..2843) /gene="X11L" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:269919" misc_feature order(2469..2471,2616..2618,2625..2642,2865..2867, 2898..2900,2907..2909) /gene="X11L" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:269919" misc_feature 3030..3281 /gene="X11L" /note="PDZ domain 1 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ1_APBA1_3-like; cd06720" /db_xref="CDD:467203" misc_feature order(3063..3083,3123..3125,3132..3134,3222..3224, 3234..3236,3243..3248) /gene="X11L" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467203" misc_feature 3312..3530 /gene="X11L" /note="PDZ domain 2 of amyloid-beta A4 precursor protein-binding family A member 1 (APBA1), APBA2, APBA3, and related domains; Region: PDZ2_APBA1_3-like; cd06793" /db_xref="CDD:467255" misc_feature order(3339..3359,3372..3374,3381..3383,3468..3470, 3480..3482,3489..3494) /gene="X11L" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467255" polyA_site 4438 /gene="X11L" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gctgttgcag ttgtgtttgc agtggccccc agtgaggcag caatcgcagc agcagcagca 61 gcgcatgcag cagcagcagc aacagcagca ccagcagaac agtagtagtc atcatccccg 121 gagatcccca gttgtccact tgaactccag ccatgaactt gtccaattcc tgcagcgaca 181 gcagcaacga gtccatggtc aatccgatgc aacagcagca gcagcaggag cgatatgtgt 241 gggagatgcg cacccgtagt ccaaatgtaa cgccagccag cacggtgcta aattcgccgg 301 atctcaatgc cgagctgtcc tacgttccgc tgcagggttt gtcaccaacg agcggagggg 361 gaggaaacgg aggaggaggt actggtggtc agggtgcggc ccgagattcc agcaactatt 421 actatcagcg accgcacttg catcagattc ggctgggcag aagtccgggc agccaattcg 481 agacgcggga tgttctgcca cagggtctgg ccagtcccgg ctcgccgacg gatgtgggca 541 aagcggatgg ccagtgtctg cgggatggtg agatcgtggt cttcgacgac atcgacacca 601 actggatgaa caagccatcg agtggtggcc accgaacgcc gggcagcaac gaggatgttc 661 tgaaagtgac caagatgatt ggccagctgc ccattgccga gtacgaggga tcaccgcgac 721 gatttggtag tcaaacgaat gcaggaggag caccgccacc gcgaaaacgt ccgccgggct 781 tcccgcaaag ggtttcgccc acaaccagtg gcgtgaataa tgcgactgcc tcggccaaag 841 catcggtggg caacctaatc gatctgatcg accacgagga ggagaagacg cccactttcg 901 attacctgta cgagttctca gagacgcgaa aggtgctgga ggagttcttc aaggcgaatc 961 cggaggacta cgccgcggaa agtggcgacg atatagccag ttcgcagcaa caggagtacc 1021 cagccacgcc catggagcag gcatatattg gtcagcggct ggcgcgaata cccaaagatg 1081 agctctacat ggtgcaccgt tcgcccatca agaagccacc aaatgaccaa aatccagcga 1141 cggcctacca ggagcacaat gacatcgagc tgtatatcga ttcgaatagt cgcagcagcg 1201 gcgatctggc ggacaccgag ctggaggcaa atttgcgtag gcattcgcgc aactttaccc 1261 tttcgccgga gacaacggac tacgattcga attgcggcga tctggatagt ctgtccaatg 1321 acatcaactg tcccacggat tatggcaaac tgtatacgag catgcccgtc ctggaggatg 1381 gcctgagcag tggtcatgcc tccgacaccg agaacaatgt ctccgtggtc tgtgaccaaa 1441 agcagtcgtc tcagtcgcaa ttccagccgg tccacgagca caacggaaac ggcgagcggc 1501 tggagaacgg agactacaat gtgatgagcg ccagcatggc cacgttgacc acagatgcct 1561 cgcaatcggc gctgataagc gactttgcct cgctgcctat gccaccggca ccagctccag 1621 ttccgccccc ttcatcatca tcgccgcccc aaattgagat cgccgatgcc agtgaatcca 1681 tggccatggc cgcagaggct gataatccgc tggacagtca ctatggtgcc gtttatgcag 1741 ccgctctaac agaaaagtca actgctctgc catcacaggc tgcctcggaa attcaggagg 1801 ccatgaagga gattcggtcc gccttgcagc gggccaaaac gcagccggaa aagctcaagt 1861 tctgcgacga ggtgctgccc acagatccgg attcccccgt ttgggtgccg cgcaagacga 1921 cggcggtctc ggtggctcag gctgcggcaa cggcggcgga cgaggagcca gacacggacc 1981 tggaaacgga tcgactactg ggtcagcagc ggcacgacga gcaggatttc ttcgctgatc 2041 agcaactggc ggatagcaat gctaacgagg gaacagagat agccagcaat ggacatctga 2101 atggcatggc cgtcgataac aacaatccga atccgaatcc aatgggcaat gccaagccgc 2161 agacttactc gacggccacc attcgtcagg gcatcggcac ctcgctgacg cccaattcgc 2221 cggacatctg ccagattgtt ggcacggcgg acatctcgat tagttcgccg gagaagctgc 2281 agtttagcaa gagtcccacg ggctccatca agtcgctgaa ggattcggcc aactcggaca 2341 agaaggccaa gtcgcgcaac aaggagggtc ttttggaacc caaagttctt atcgagggcg 2401 tgctctttcg ggcccggtat ctcggttcga ctcagcttgt ttgcgagggc cagccgacca 2461 agtcgaccag gatgatgcag gccgaggagg ccgtctccag gatcaaggct cccgagggcg 2521 aaagccagcc gagcaccgaa gtggacctgt tcatatcaac cgagaaaata atggtgctga 2581 acaccgatct caaggagatc atgatggacc atgccctacg cactatatcc tatatagcgg 2641 acattggcga tctggttgtg ctgatggctc gtcgccgatt cgttccgaat agtgtggtgg 2701 atccagcgac ggccagtccc ctgggcgatc cccttcccag tgcagcggcg gcgggaatgg 2761 gtgaatcgga tgagtcgccg cccaaggaac aggccctaag caaacataat cgcacgccca 2821 agatgatatg tcacgttttc gagagcgacg aggcacagtt catagcccag tccattggac 2881 aggcctttca ggtggcctac atggagttcc tcaaggcgaa cggcatcgag aacgagagtc 2941 tggccaagga gatggactac caggaggtgc tcaacagtca ggagatcttc ggcgacgagc 3001 tggagatctt cgccaagaag gagctgcaaa aggaggtggt ggtgcccaag gccaagggcg 3061 aaatcctggg cgttgtgatc gtcgagagcg gctggggctc catgctgccc accgtggtga 3121 ttgccaatct gatgagttcc ggtgcggctg cccgctgcgg tcagctgaac atcggtgacc 3181 agctgatagc catcaatggc atgagcctcg tcggattgcc gctgtccacc tgccagagct 3241 acatacgcaa tgccaagaat caaactgccg tcaagttcac cgtcgtgccc tgtcctccgg 3301 tcgtcgaggt caagatcctg cgacccaagg cgctctttca gttgggtttt agtgttcaaa 3361 atggcgtgat ctgtagcctt ttgcgtggcg gcattgccga gcggggcgga gtacgcgttg 3421 gccatcgcat cattgagatt aacaaccaga gcgtagtggc cgttccgcac gataccattg 3481 tcaagctgtt gtcatcctca gtgggcgaga tcctcatgaa gacaatgccc acgtccatgt 3541 ttcgtttgct caccggccag gagacgccta tctatatata aacctatata aatatgcaac 3601 tgttcacacg cctgcgctgg aatcgaaaaa ctataaattc gtcaactgca actcgatcag 3661 ctttaagttc catcaactga aaacgaatcg atagctaatc gattcgaata tagaccaatt 3721 attggaattc gatcagcctt aagttgataa attgtacact ttacattttc caaaaatgtt 3781 tcttaaatga ttcgacaatt tgtaaatcga ttgagcctta aatgagatta gttctttatc 3841 gacaaatcgt tcaactgccc agaattgata tactgctatg gagattatta acagagcttc 3901 aaaagaatat tcatgttttt cgctattcgg cccatctttg tatatgaaaa agactgaatt 3961 taaagccagt gcgagtgtat gtgagcagtc attgtaaagt attcaaaaaa attgtaagcc 4021 caaatgtccc aaaaatatat atacccctta tatgtatacc tttcccatta ttccctcgca 4081 tccacaacca gtaggctata agcattcgat tgaatttact tgcaagcaat tatttatgat 4141 atgatctaat ccattatttg tcatgtaaat taaccgtact ttagttcttt aactacattt 4201 ataattttcg ataaagagaa acaaaaagca agacacttac cttatgccaa aaaagagtta 4261 gatttcgtta catttattat tgtatagatt gtattatcca ttgcggataa gctggattat 4321 tgcaatacca ttaccgatat ttataattaa agatgaatag ccttagaaaa acgaagccat 4381 gcctgcaaaa caacaaacaa aataaatgca tttaaaacgc gtcagattaa agcaaaaa