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PREDICTED: Drosophila takahashii ankyrin repeat and LEM


LOCUS       XM_070219306            3535 bp    mRNA    linear   INV 09-DEC-2024
            domain-containing protein 2 (Ankle2), transcript variant X2, mRNA.
ACCESSION   XM_070219306
VERSION     XM_070219306.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3535
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3535
                     /gene="Ankle2"
                     /note="ankyrin repeat and LEM domain-containing protein 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:108056715"
     CDS             435..3413
                     /gene="Ankle2"
                     /codon_start=1
                     /product="ankyrin repeat and LEM domain-containing protein
                     2 homolog isoform X2"
                     /protein_id="XP_070075407.1"
                     /db_xref="GeneID:108056715"
                     /translation="MGSLLQLSSSPTSSPSSLSSSSIIVNGRQHVQQPQQQQQQQQEL
                     SGERPPFWAPTKQELVEFRKQIEAGNRERVKRIIWDNPRFLISSGDKPTSLKEGCRYN
                     AMHICAQHNKASIAKLLIATMSDREFAQLYVGKKGSSKMCSELNQSLVDYYLNMPDKA
                     RGETPLHFAAKMGHVAMVELLIMYPECKSLRNTEGKEPKEIICLRNGQASPVTIAKLQ
                     LLLHDPHFVPVMRSSSNVLPPKVGQPFSPKDPPNLQHKTDECEGLSVDLTISALAGPM
                     SREKAMNFYRRWKTPPRVNSNVMSPLANSPFSSPVKVTPSSHSSPVHAAGRRVLFSPL
                     ATATSSPKRSSHPVTNGGNDECNNNNDNVKPAAAATAGYPLEFPATPIRQMRPDLFMA
                     YRNTSIGSMADESIVLDTSISMNTSLNDSFRERHIKNTDIEKGLEVVGRQLARQEQLD
                     WREYWDFLDSFVDICMPDGLDRLEAYFVEKSEQRAEKLETVWNFSHLHQYLDLMSGDQ
                     QLRKDRSASAAAAASSTPTAGVMTPYTCVEKSLQVFAKRITKTMINKIGNMVSINDTL
                     LCELKRLKSLIVSFKDDVRFLSVDFSKVHSRIAHLVASYVTHSQEVSVAMRLQLLQML
                     RSLRQLLGDEGGREQQLGCVCGSLLVMLEQAPTTAVHLPDTLKTEELCSAAWETEQGC
                     ACLWDANLSRKTSRRKRTKSLLAAAAARTQELQDTAAASASTGTTAPLHVSLSLGASS
                     FGAPRAAVVAQQSDDEDEDSDNDVPFFDCSTKYGSSSEDEENFRTPPESMSPRMSVDL
                     EPRYDLFIFGNEPTKRDLDVLNALSNVDVDKETLPHVHAWKTAMESFSRAEMNLFPSP
                     KNVKVQKPDPWSPGTSASHNSQPSLHSKRLLAAPKLNAVAAVVAGRRGSGPGPSTPPM
                     LPRLPRTPSAASIQVVHPTIAVNGGGSVEAASPAAPPAAATRPWIFKTPLNKVRGLFS
                     QYREVAVEDEHTPIGGRIAN"
     misc_feature    741..908
                     /gene="Ankle2"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    744..986
                     /gene="Ankle2"
                     /note="Ankyrin repeats (3 copies); Region: Ank_2;
                     pfam12796"
                     /db_xref="CDD:463710"
     misc_feature    915..1010
                     /gene="Ankle2"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    918..>1262
                     /gene="Ankle2"
                     /note="6-phosphofructo-2-kinase/fructose-2,
                     6-biphosphatase; Provisional; Region: PTZ00322"
                     /db_xref="CDD:140343"
     polyA_site      3535
                     /gene="Ankle2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtttctata tttcttttta ttatatccgt actaaaatag taaaaactat taatacgaac
       61 gcagctttat atcagccagt acccaccaaa ttctcctcct tttttaaaat tttttagtga
      121 tatttatact gcaagctgcg aagcaagtac cccaaaaaac cgattcgcca ctgtggctga
      181 tcttcaccga gaaatccaag gcgctggacg tcctgcggca ctacaaggag gcccgcctcc
      241 gcgaatttcc caatctggag caggccgaga gctacgttca gttcggtttc gagagcatcg
      301 aggcgctcaa aagattcggc aaggccaaat ccgaaagcaa gcccattcct ttaagcggcg
      361 gcagtggcag cggctataag agctccacgg acagttcgta ttcctcctcg ccgacgggta
      421 gcggcagttc ctcaatgggc agcctactgc agctcagcag ctcgcccact tcatcgccaa
      481 gcagcctcag cagcagcagc atcattgtta atggccgcca gcatgttcag cagccacaac
      541 aacagcagca gcagcagcag gaattatccg gcgagcgtcc tcccttctgg gcgcccacca
      601 aacaggagct ggtcgagttt cgcaagcaaa tcgaagccgg caatagggaa cgggtcaagc
      661 ggatcatttg ggacaatccc agatttctaa taagcagcgg cgacaagccc accagcttga
      721 aggagggctg tcgctacaat gccatgcaca tttgcgccca gcacaacaag gccagcattg
      781 ccaagctgct catagcgacc atgtcggatc gcgagtttgc ccagctgtat gtgggcaaga
      841 agggcagctc gaagatgtgc tcggagctca atcagagtct ggtcgactat tacctcaata
      901 tgccggataa ggcgcgtggc gagacgccgc tgcactttgc cgccaagatg ggacatgtgg
      961 cgatggtcga gctgctcatt atgtatccgg aatgcaagtc actgaggaat acggagggca
     1021 aggagccgaa ggaaatcatc tgcctgcgta atgggcaagc gagtcctgtg actatcgcca
     1081 agctgcagct gctcctgcat gatccgcact ttgtgcccgt catgagatct tcatccaatg
     1141 tgctgccccc gaaagtgggt caaccgttct cgcccaaaga tccgccgaac ctgcaacaca
     1201 agacggacga gtgcgaggga ctcagcgtgg acctgacgat cagtgcgctg gcggggccca
     1261 tgtcccgcga aaaggccatg aacttctacc gccgctggaa gacaccgccg agggtcaaca
     1321 gcaatgtgat gtcgccgctg gccaactccc catttagctc gcctgtgaag gtgacgccga
     1381 gtagccactc gagtcctgtc cacgcggcgg gacgcagggt gctctttagt ccgctggcga
     1441 cggccaccag ctcaccgaaa cgttcctcgc atccagtgac caatggaggc aacgacgagt
     1501 gcaacaacaa caatgataat gtcaagccag ctgctgctgc tactgctggg tatccgctgg
     1561 aattcccggc cacacccata cgccaaatga gaccggatct ttttatggcc tatcgcaaca
     1621 ctagcatcgg ctcgatggcc gatgaatcaa tagtcctgga cacgagtatt agcatgaata
     1681 cgtcgctgaa cgatagcttc cgcgagaggc acatcaagaa cacggatatc gagaagggtc
     1741 tggaggtggt gggacgtcag ttggcacgcc aggagcagct ggattggcgc gaatactggg
     1801 actttctcga ctcgttcgtc gatatttgta tgcccgatgg actggatcgc ctggaggcat
     1861 attttgtgga gaagtccgaa cagcgggcag agaaattgga gacggtgtgg aatttttccc
     1921 atctgcatca gtatttggat ttgatgtcgg gcgatcagca gctgcgcaag gacagaagtg
     1981 cctcagctgc cgcagcggca tcatctacgc caaccgccgg ggtcatgacc ccgtacacat
     2041 gcgtcgagaa atcactgcag gtgttcgcca agcgcatcac caaaacgatg atcaacaaaa
     2101 tcggcaacat ggtgtccatc aatgacacgc tgctctgcga gctcaaaaga ctgaaatcgc
     2161 tgattgtcag cttcaaggac gatgtacgct tcctgagcgt cgactttagc aaggtgcatt
     2221 cgcgcattgc ccatttggtg gccagctatg tgacccattc gcaggaggtt agcgtggcga
     2281 tgcgtctgca gttgctccaa atgctacgct cgttgcgcca actgctgggc gacgagggcg
     2341 gccgggagca gcagttgggc tgcgtatgcg gcagcctgct tgtgatgctg gagcaagcgc
     2401 caaccaccgc cgtccacctg cccgatacgc tgaagaccga ggagctgtgc tcggccgcct
     2461 gggagacgga gcagggatgc gcctgcctgt gggacgccaa tctcagccgg aagaccagtc
     2521 ggcgcaagcg caccaagtcg ctgctggcgg cagccgccgc taggactcag gagctgcagg
     2581 atacagcggc ggcatcggca tccactggaa ccaccgctcc tctgcacgtt tcgctgagtt
     2641 tgggtgccag cagctttgga gcgccgaggg cggcagttgt ggcgcaacaa agcgacgacg
     2701 aagacgagga cagcgacaat gatgttccat tttttgattg ttctacgaaa tatggtagca
     2761 gcagcgagga tgaggagaac ttccgtacgc caccggagag catgtcgcca cgcatgtccg
     2821 tggatctgga gccgcgctac gatttgttca tattcggaaa cgagccaacc aagcgggatt
     2881 tggatgtgct gaatgccctt tccaatgtgg acgttgacaa ggagacactg ccgcatgtcc
     2941 atgcctggaa gactgccatg gagagcttct ccagagctga aatgaatctc tttccatcgc
     3001 cgaagaacgt gaaggtacaa aagccggacc cctggtcacc gggaacaagt gctagccaca
     3061 acagccagcc atcgctgcat tccaagcggc tcctggcggc acccaaactg aatgctgtgg
     3121 ccgccgtcgt agccggaaga cgtggctccg gcccaggacc gtcgacgccg ccaatgctgc
     3181 ctcgcctgcc gcgcactccg tctgccgcca gtattcaagt tgttcaccca acgatcgccg
     3241 tgaatggcgg cgggtccgtg gaagcagctt cccctgctgc tcccccggcg gcggcgacgc
     3301 gcccgtggat atttaagacg ccactgaaca aggttcgcgg attgttcagc caatatcgcg
     3361 aggtggccgt tgaggatgag cacacgccga tcggcggtag aatcgccaat tgaaaccaca
     3421 accatttttt ttttataaca taaaagcagt gaaataaaag aatgaaatta acattttgaa
     3481 ttataagcat aatttaatga ataataaaga ataatttaat gtttttttat ggaaa