PREDICTED: Drosophila takahashii Rab11 interacting protein (Rip11),

LOCUS       XM_070219299            1597 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X4, mRNA.
ACCESSION   XM_070219299
VERSION     XM_070219299.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1597
                     /gene="Rip11"
                     /note="Rab11 interacting protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108069860"
     CDS             84..1415
                     /gene="Rip11"
                     /codon_start=1
                     /product="rab11 family-interacting protein 1 isoform X4"
                     /protein_id="XP_070075400.1"
                     /db_xref="GeneID:108069860"
                     /translation="MNEMFGSVTHFMIWITEALGCDSMQRARGLLTKGKNGTNNCFVT
                     IALGKEKYQTSVKDKAETSVNWNEECELKIPDQGNRAELTLTCLHRNNLGIDEFLGQA
                     SLPLNEMDVYDRPRAKWFKLESKPGKEKKNKERGELEVRIAFVVKSGSLTDLSKKDKH
                     KSSIGQLASSVGGSLLSIGNGEKRRSIKKLAGSLSSKLHIRSKKKHQEGGADDSSSFG
                     GSFASLGTPNSSNGRGQNGGGGSGRRRGGQRAGEADPGVISEDEDEFVFDNLSHKSSG
                     SSLNIQRTGLQPPAALGTAPNFAPRHPSPLLSNGGGVAGGGSGKDKYNNDNESNSPSP
                     KSTERIIIGHEKSGSHAERRSEISAQLAKKYEGKSREELMLIANGMENEALLQRQRVK
                     ELEDYLDNLLLRVMETHPKILQNPYSRTTSAKRYATWSFWSRSTPTPTTTH"
     misc_feature    150..512
                     /gene="Rip11"
                     /note="C2 domain; Region: C2; cl14603"
                     /db_xref="CDD:472691"
     misc_feature    1188..1331
                     /gene="Rip11"
                     /note="FIP domain; Region: RBD-FIP; pfam09457"
                     /db_xref="CDD:462805"
     polyA_site      1597
                     /gene="Rip11"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atacatgttt tttgggtgtt ttttcgggtg agacttttaa tcaccagagt ttagtgtaca
       61 gaattaatca gaaatcagta aaaatgaacg aaatgtttgg tagcgttact cactttatga
      121 tctggataac ggaagccttg ggctgtgatt caatgcagcg agcgcggggg ctgctaacca
      181 agggcaagaa tggcaccaac aactgcttcg tcacgattgc cttgggcaag gagaagtacc
      241 agacgtcggt caaggacaag gccgagacga gcgtcaattg gaacgaggag tgcgagctca
      301 aaatccccga tcagggcaac cgcgccgagc tcactttgac ctgcctgcac cgcaacaatc
      361 tgggcatcga tgagttcctc ggccaggcct cgctgcccct caacgagatg gacgtctacg
      421 atcgtccgcg cgccaaatgg ttcaagctgg agagcaagcc gggcaaggag aagaagaaca
      481 aggagcgcgg cgagctggag gtgcgcatcg ccttcgtcgt gaagtccggt tcgctgaccg
      541 atctcagcaa gaaggacaag cacaagtctt ccattggcca gctggccagc tccgttggcg
      601 gcagcctgct gtccatcggc aatggcgaga agcggcgcag catcaagaag ctggccggat
      661 cgctgagctc caagctgcac atacgcagca agaagaagca tcaggaggga ggagcggatg
      721 atagcagctc ctttggcggc tcctttgcca gcctgggcac cccaaatagc tcgaatggcc
      781 ggggacagaa cggcggcggc ggcagtggac gacgacgtgg cggccagcgg gcgggcgagg
      841 ccgatcccgg cgtgattagc gaggatgagg atgagtttgt cttcgataat ctgtcgcaca
      901 agagttcggg tagctcgctg aacatccaac gcaccggttt gcagcccccg gcggcgttag
      961 gaacggcgcc taactttgcg ccgcgccatc catcgcctct gctgagcaat ggaggaggag
     1021 tagcaggcgg cggcagcggg aaagataaat acaacaacga caatgagagc aactcgccta
     1081 gtcccaagtc cacggagcgc ataattattg gtcacgagaa gtcgggctcg catgcggagc
     1141 gacgctcgga gatatccgcc cagctggcca agaaatacga gggcaagtcc cgggaggaac
     1201 taatgctaat tgccaacgga atggagaacg aggctctgct gcagcgacag cgcgtcaagg
     1261 agctggagga ctacctggac aacctgctgc tgcgcgtgat ggagacgcat ccgaagatct
     1321 tgcagaatcc ctattcgcgc accacgtccg ccaagaggta cgccacctgg tcgttctggt
     1381 ctcgctccac gcccacgccc accaccaccc actaaccaat caaccaacca aatcaaacca
     1441 actgcatgac ctttgaccgc cggtaggatt gttgataccc gatagagcca cccttgcgat
     1501 ctaaattcgg tgtcgcgcac tggatggaaa ttattttgat atctatattt tgtatacatg
     1561 atgtgtgttc actccaaatc gccataaata tgaacaa