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PREDICTED: Drosophila takahashii minibrain (mnb), transcript


LOCUS       XM_070219294            2843 bp    mRNA    linear   INV 09-DEC-2024
            variant X5, mRNA.
ACCESSION   XM_070219294
VERSION     XM_070219294.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2843
                     /gene="mnb"
                     /note="minibrain; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108066916"
     CDS             16..2259
                     /gene="mnb"
                     /codon_start=1
                     /product="serine/threonine-protein kinase minibrain
                     isoform X3"
                     /protein_id="XP_070075395.1"
                     /db_xref="GeneID:108066916"
                     /translation="MSTALVYWQSTNGGDAIDKATTADWAPFVMGPPPAAAAPPGVVG
                     FSSFSSTTTSSLNHHHHSNNSNGSSNHHNHHHPPHYINYLAQIGCQHRVRNWPTNGNQ
                     EADDDGDGHQIISKFQPKSAWNTTANVAVDRVDGNLLVIQKSSARSEAERPQHYDISA
                     YGSSGGSVAVDAAQGSGSGGGRQRHAPLYGRFVVEEDLPPTHRDVMHHHSSPSSSSEV
                     RAMQARIPTTFRDPSSGPLRKLSVDLIKTYKHINEVYYAKKKRRAQQTQGDDDSSNKK
                     ERKLYNDGYDDDNHDYIIKNGEKFLDRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIKI
                     IKNKKPFLNQAQIEVKLLEMMNRADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYD
                     LLRNTNFRGVSLNLTRKFAQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKI
                     VDFGSSCQLGQRIYHYIQSRFYRSPEVLLGIQYDLAIDMWSLGCILVEMHTGEPLFSG
                     CNEVDQMNKIVEVLGMPPKYLLDQAHKTRKFFDKIVADGSYVLKKNQNGRKYKPPGSR
                     KLHDILGVETGGPGGRRLDEPGHSVSDYLKFKDLILRMLDFDPKTRVTPYYALQHNFF
                     KRTADEATNTSGAGATANAGAGGSGSSGAGGGSSGGGGGGLGTSSSGGAVSSSSAAAP
                     TAATAAATAAGSSGSGVGGGSSSSTAQQQQAMPLPLPLPLPLPLPLPLPPLAGASDAQ
                     CHADDRR"
     misc_feature    883..1902
                     /gene="mnb"
                     /note="Catalytic domain of the protein kinase,
                     Dual-specificity tYrosine-phosphorylated and -Regulated
                     Kinase 1; Region: PKc_DYRK1; cd14226"
                     /db_xref="CDD:271128"
     misc_feature    order(943..957,967..969,1006..1008,1012..1014,1054..1056,
                     1114..1116,1162..1173,1180..1182,1186..1191,1309..1311,
                     1315..1317,1321..1326,1330..1332,1369..1371,1378..1380,
                     1405..1407,1411..1422,1426..1428,1537..1539)
                     /gene="mnb"
                     /note="active site"
                     /db_xref="CDD:271128"
     misc_feature    order(943..957,967..969,1006..1008,1012..1014,1114..1116,
                     1162..1173,1180..1182,1309..1311,1315..1317,1321..1326,
                     1330..1332,1369..1371)
                     /gene="mnb"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271128"
     misc_feature    order(1054..1056,1186..1188,1309..1311,1315..1317,
                     1378..1380,1405..1407,1411..1422,1426..1428,1537..1539)
                     /gene="mnb"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271128"
     misc_feature    1366..1428
                     /gene="mnb"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271128"
     polyA_site      2843
                     /gene="mnb"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggacaaagaa aggatatgtc gacggctctg gtttattggc agtcaacgaa cggcggcgat
       61 gcgattgaca aggccaccac cgcggattgg gcgccatttg tcatgggtcc accaccagca
      121 gcagcagcac cacctggtgt cgttggtttc agtagcttca gtagcaccac caccagcagt
      181 ttgaaccacc atcatcacag caacaacagc aacggcagca gcaaccatca caatcaccat
      241 catccgcctc attacatcaa ttatttggcg caaattggct gccagcatcg tgtcagaaat
      301 tggccaacaa atggcaatca ggaggcggac gacgatggcg atggccatca aatcatctca
      361 aaattccagc ccaaaagtgc ttggaacacc acagcgaatg tggctgtaga tcgagtcgat
      421 ggcaatctgt tggtgatcca gaaatcttca gcgagaagtg aagcagaaag accacagcat
      481 tatgatatat ccgcctatgg gtccagcggg ggcagcgtcg ccgtcgacgc agctcagggc
      541 agcgggagcg ggggcggaag acagcgccac gcccccctct acggacgctt cgtcgtcgaa
      601 gaggatctgc ctcccacgca ccgggatgtc atgcaccatc actctagtcc ctcgtcttcg
      661 tcggaggtgc gcgccatgca ggcccgtatt cccaccacct ttcgggatcc ctcctcggga
      721 cctttgcgca agctgagtgt cgatctgata aagacctaca agcacatcaa cgaggtttac
      781 tatgcgaaaa agaaacgtcg tgcccagcag acgcaaggag acgacgactc gtccaacaaa
      841 aaggagcgaa aactgtataa cgatggctat gacgacgata atcacgacta tataatcaag
      901 aatggcgaaa agtttttgga tcgctacgag atcgactcgc tgatcggcaa aggcagtttt
      961 ggtcaggtgg tgaaggctta cgatcacgag gagcagtgcc acgtggcgat caagataatt
     1021 aagaataaga aaccgttcct aaaccaggca cagatcgagg ttaagctgct cgagatgatg
     1081 aaccgggcgg atgccgaaaa caaatactac atcgttaagc tcaagcgaca ctttatgtgg
     1141 cgcaaccacc tgtgcctggt gttcgagctg ctctcataca acctgtacga cctgctgcgg
     1201 aacaccaact tccggggcgt ttcgctgaac ctcacgcgca agttcgccca gcagctgtgc
     1261 accgcactgc tcttcctcag cacccccgaa ctgaacataa ttcactgtga tttgaagccc
     1321 gagaacatcc tgctgtgcaa cccgaagcgt tcggcgatca agatcgttga ctttggcagc
     1381 tcctgccagc tgggacaaag gatctaccac tacatccaat cgcgcttcta ccgctcgcca
     1441 gaggtcctgc tgggcatcca gtacgacctg gccatcgaca tgtggtcgct gggctgcatc
     1501 ctggtcgaga tgcacaccgg cgagccgctc ttctccggct gcaacgaggt ggaccagatg
     1561 aacaagatcg tcgaggtgct gggcatgccg ccgaaatatc tgctcgacca ggcgcacaag
     1621 acgcgcaagt tcttcgacaa gatcgtagcc gatggctcgt atgtgctgaa gaagaatcag
     1681 aatgggagga aatacaagcc gcccggttcg cgtaaactgc atgatatttt gggtgtggaa
     1741 accggtggtc ccggtggccg acgcctggat gagcccggtc actcggtctc cgattatctc
     1801 aagttcaagg atcttatcct gcgcatgctc gactttgacc ccaagacccg ggtaacgccc
     1861 tactatgccc tgcagcacaa cttcttcaag cgcacagccg acgaggcgac caatacgagc
     1921 ggcgcgggcg ccacagcgaa cgcaggagcc ggtggctccg gttccagcgg agcaggagga
     1981 ggttccagtg gcggaggagg cggtggccta ggaacgagca gcagcggtgg agcggtctcc
     2041 tcatccagcg cagcggcacc cacggcggcg acagcagcgg ccacggcagc cggatcatcg
     2101 ggatcgggcg tcggcggggg atcctcctcc tctacagcgc agcaacagca ggcgatgccg
     2161 ctgcccttgc ccctgcccct gccgcttccg ctgccactgc cgttgccgcc actcgcgggt
     2221 gcctcagatg cccagtgtca cgcagacgat cgccgatgac cggcaacagc ggcagcagca
     2281 gcaacagcag cagcagcagc agcaacatca actgcagcgg caacttcaag gatgccacaa
     2341 cagtaaccag caacatgcaa tatgcaacat ttgcagtccg gtgatccgct ggtcatgtta
     2401 ttatatccat tatctcacac atccggcatt ttgtaaatat acactctctc tttcgaacac
     2461 acactgtcta tctctttcca tgcctctatc cctgtctttg tctctccctc tatctccctc
     2521 tctctctatc caacgccact cgaaaacaag agaaatattt gttttttcct acaagacata
     2581 atatagtggc gccttcactt cactaatttc aagaaagcat aatttttttt ttagaattta
     2641 atatgtaatt tgtattatgc tcacgcattt taagcgctcg gatgaagata caatcgtgtg
     2701 ttaagtgttt aaacgttttt ttgtcaactt aaattacgca aaaacatgtc taaagattaa
     2761 taacttaggt ctaagcattt agtgtcatag aaatgtacga agagtttgcg aatacataag
     2821 agtaatatat gaaataagaa gaa