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PREDICTED: Drosophila takahashii minibrain (mnb), transcript


LOCUS       XM_070219293            5178 bp    mRNA    linear   INV 09-DEC-2024
            variant X3, mRNA.
ACCESSION   XM_070219293
VERSION     XM_070219293.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5178
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..5178
                     /gene="mnb"
                     /note="minibrain; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins"
                     /db_xref="GeneID:108066916"
     CDS             1417..4167
                     /gene="mnb"
                     /codon_start=1
                     /product="serine/threonine-protein kinase minibrain
                     isoform X2"
                     /protein_id="XP_070075394.1"
                     /db_xref="GeneID:108066916"
                     /translation="MYRIEDTNSGGVMDKNKQKLSAYGSSGGSVAVDAAQGSGSGGGR
                     QRHAPLYGRFVVEEDLPPTHRDVMHHHSSPSSSSEVRAMQARIPTTFRDPSSGPLRKL
                     SVDLIKTYKHINEVYYAKKKRRAQQTQGDDDSSNKKERKLYNDGYDDDNHDYIIKNGE
                     KFLDRYEIDSLIGKGSFGQVVKAYDHEEQCHVAIKIIKNKKPFLNQAQIEVKLLEMMN
                     RADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQL
                     CTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYHYIQSRFY
                     RSPEVLLGIQYDLAIDMWSLGCILVEMHTGEPLFSGCNEVDQMNKIVEVLGMPPKYLL
                     DQAHKTRKFFDKIVADGSYVLKKNQNGRKYKPPGSRKLHDILGVETGGPGGRRLDEPG
                     HSVSDYLKFKDLILRMLDFDPKTRVTPYYALQHNFFKRTADEATNTSGAGATANAGAG
                     GSGSSGAGGGSSGGGGGGLGTSSSGGAVSSSSAAAPTAATAAATAAGSSGSGVGGGSS
                     SSTAQQQQAMPLPLPLPLPLPLPLPLPPLAGASDAQCHGLLMHSAAANAMNNFSALSL
                     QPNAHPPPSLGNSHHSSNSLGSLNHISPGNSNSGSNSNSARHNRLYGHHNSSSNHNSI
                     SYPHAMECDPPQMPPPPPNNHGGRMRVPTILQLQPPSSYAPSSVPYYGNMSSSSSSCS
                     SSSVAAAAAAAAAAAAAAASHLMMTDSSVISATAAGGGPNSGPNPSAAAFLFPSQPAG
                     TQLYGTAPASLSELPLPPLPLPLSHPLPPMSMPLQLPPSSSSSSASSSGGGGIGGVIG
                     PGHVGQRRHISGPASAQVNAAGGGGSNNSSAATGAASSSDASSSSPMVGVCVQQNPVV
                     IH"
     misc_feature    1870..2889
                     /gene="mnb"
                     /note="Catalytic domain of the protein kinase,
                     Dual-specificity tYrosine-phosphorylated and -Regulated
                     Kinase 1; Region: PKc_DYRK1; cd14226"
                     /db_xref="CDD:271128"
     misc_feature    order(1930..1944,1954..1956,1993..1995,1999..2001,
                     2041..2043,2101..2103,2149..2160,2167..2169,2173..2178,
                     2296..2298,2302..2304,2308..2313,2317..2319,2356..2358,
                     2365..2367,2392..2394,2398..2409,2413..2415,2524..2526)
                     /gene="mnb"
                     /note="active site"
                     /db_xref="CDD:271128"
     misc_feature    order(1930..1944,1954..1956,1993..1995,1999..2001,
                     2101..2103,2149..2160,2167..2169,2296..2298,2302..2304,
                     2308..2313,2317..2319,2356..2358)
                     /gene="mnb"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:271128"
     misc_feature    order(2041..2043,2173..2175,2296..2298,2302..2304,
                     2365..2367,2392..2394,2398..2409,2413..2415,2524..2526)
                     /gene="mnb"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:271128"
     misc_feature    2353..2415
                     /gene="mnb"
                     /note="activation loop (A-loop); other site"
                     /db_xref="CDD:271128"
     polyA_site      5178
                     /gene="mnb"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttctgcggc gctagagacg gggcaaaagt cctcatcccc agaaacgaat tgctggccga
       61 ggaaaatgca gcgcgaaaca caggcggcgt gctaaataaa taaataaata gagtccgggc
      121 cgctggaaaa tcggaaaagc ggaaaaacgg agagcacgcg aacggcgaaa gcgaaaacga
      181 aacgcttttt atttagcatt tcggtccccg attcgcccgt gtctggcagc agcagcggcg
      241 gcagctgcaa ccaccaacaa caactacaaa catgtgtgga ataactgcag cgcaacgcgt
      301 ttaaaaagcc aaaagcctgg aaataaaata gccgaaaagg aaaaacaacg gcgatcatca
      361 acaaaaaaaa aaacaaaaaa ccacaacagc agcagtacag ttttgtaaac aaagcgtggc
      421 gacaattaat atcaaatgta aatgtaaagg aaaacaaaaa caaaaaaaag aagtgctgag
      481 aaaatgaaaa tgtttaagca aaatgttgat aatagcggta gccaaaaatt accataaaac
      541 caaaactaca ttaacttgat aaaatcgata aggtaaatag gaagcgaatc gataaagtaa
      601 aataaaaaaa aatccaccaa aaagcgcaga ggaaacagaa gaaagccaga tcgcaaaaag
      661 aaataatttt gctttcttct cttctcagat ttccctcgtg cgtctgtgtg cgtgtgcgtt
      721 cgcgcgtgtg tgtgtgtgtt ttgttttcat tagagcacac acacacgctc ccgttgtgtg
      781 ggggtgtgtg taattgcaat gctaaacggt aaataaacgg aaagagcaat aacaacaaca
      841 acaagaagag aggagaaacg tgtttttgtt ttgtttgttt cataaatgtt tgacatttta
      901 cactgcaaaa aataataata aactaaataa caaacgcgaa agaaacggtt aagcaaattc
      961 aacaaaagac ttgaaacttg tgttcataat tttaaacaaa acaaacaaca aaaagtattc
     1021 gacccataaa aatatatacg aaaatatata tattaaccaa taccacatac atatatatat
     1081 attaactggt acacacgaaa taataagtaa aatgcaacaa caacgacaaa aaggataacg
     1141 aaaataacgc aaaatacaca aagcaaaaaa actatttaat ttatagaaaa caaaaacgaa
     1201 atcacaagca accaaaatca gacgtaaaga aatataaaaa atacaatttc aatctatcca
     1261 aaatcgcatg aacaaataac gcaatatata tattatatat atttatataa acacaagtat
     1321 atacatgtca agtatatata aagtaaaata tatgtaggtg taaacaaacc caagtaacga
     1381 ttcattaatc agcgcaaaac caacaacatc agccccatgt atagaataga ggatacgaat
     1441 agcggcggcg ttatggataa gaataaacag aaactatccg cctatgggtc cagcgggggc
     1501 agcgtcgccg tcgacgcagc tcagggcagc gggagcgggg gcggaagaca gcgccacgcc
     1561 cccctctacg gacgcttcgt cgtcgaagag gatctgcctc ccacgcaccg ggatgtcatg
     1621 caccatcact ctagtccctc gtcttcgtcg gaggtgcgcg ccatgcaggc ccgtattccc
     1681 accacctttc gggatccctc ctcgggacct ttgcgcaagc tgagtgtcga tctgataaag
     1741 acctacaagc acatcaacga ggtttactat gcgaaaaaga aacgtcgtgc ccagcagacg
     1801 caaggagacg acgactcgtc caacaaaaag gagcgaaaac tgtataacga tggctatgac
     1861 gacgataatc acgactatat aatcaagaat ggcgaaaagt ttttggatcg ctacgagatc
     1921 gactcgctga tcggcaaagg cagttttggt caggtggtga aggcttacga tcacgaggag
     1981 cagtgccacg tggcgatcaa gataattaag aataagaaac cgttcctaaa ccaggcacag
     2041 atcgaggtta agctgctcga gatgatgaac cgggcggatg ccgaaaacaa atactacatc
     2101 gttaagctca agcgacactt tatgtggcgc aaccacctgt gcctggtgtt cgagctgctc
     2161 tcatacaacc tgtacgacct gctgcggaac accaacttcc ggggcgtttc gctgaacctc
     2221 acgcgcaagt tcgcccagca gctgtgcacc gcactgctct tcctcagcac ccccgaactg
     2281 aacataattc actgtgattt gaagcccgag aacatcctgc tgtgcaaccc gaagcgttcg
     2341 gcgatcaaga tcgttgactt tggcagctcc tgccagctgg gacaaaggat ctaccactac
     2401 atccaatcgc gcttctaccg ctcgccagag gtcctgctgg gcatccagta cgacctggcc
     2461 atcgacatgt ggtcgctggg ctgcatcctg gtcgagatgc acaccggcga gccgctcttc
     2521 tccggctgca acgaggtgga ccagatgaac aagatcgtcg aggtgctggg catgccgccg
     2581 aaatatctgc tcgaccaggc gcacaagacg cgcaagttct tcgacaagat cgtagccgat
     2641 ggctcgtatg tgctgaagaa gaatcagaat gggaggaaat acaagccgcc cggttcgcgt
     2701 aaactgcatg atattttggg tgtggaaacc ggtggtcccg gtggccgacg cctggatgag
     2761 cccggtcact cggtctccga ttatctcaag ttcaaggatc ttatcctgcg catgctcgac
     2821 tttgacccca agacccgggt aacgccctac tatgccctgc agcacaactt cttcaagcgc
     2881 acagccgacg aggcgaccaa tacgagcggc gcgggcgcca cagcgaacgc aggagccggt
     2941 ggctccggtt ccagcggagc aggaggaggt tccagtggcg gaggaggcgg tggcctagga
     3001 acgagcagca gcggtggagc ggtctcctca tccagcgcag cggcacccac ggcggcgaca
     3061 gcagcggcca cggcagccgg atcatcggga tcgggcgtcg gcgggggatc ctcctcctct
     3121 acagcgcagc aacagcaggc gatgccgctg cccttgcccc tgcccctgcc gcttccgctg
     3181 ccactgccgt tgccgccact cgcgggtgcc tcagatgccc agtgtcacgg cctgcttatg
     3241 cactcggcgg cggccaatgc gatgaacaac ttctccgctc tgagcctgca gcccaacgcc
     3301 catccgccgc cctcgctggg caacagccat cacagcagca acagcctggg cagcctgaat
     3361 cacattagtc ccggcaacag caacagcggc agcaacagca acagcgcgcg ccacaatcgc
     3421 ctctacggcc accacaacag tagcagcaat cacaacagca tcagctatcc gcacgccatg
     3481 gaatgcgatc cgccgcagat gccgccaccg ccgccaaata atcatggagg caggatgcga
     3541 gtgccgacga tcctgcagct gcagccgccg tccagctatg cgcccagttc ggtgccctat
     3601 tacggcaaca tgtcctcgtc ctcatcctca tgctcatcct cctcggtggc cgcagcagca
     3661 gcggcggcgg cagcagcagc ggccgcagct gcctcgcatc tcatgatgac cgattcgagt
     3721 gtgatcagcg ccacggcggc gggcggtggt ccgaatagcg gacccaatcc gtcggcggcc
     3781 gcctttctct ttccatctca gcccgccgga acgcagctgt atggaacggc gcccgcctcg
     3841 ctgagcgagc tgccgctgcc gccactgccg ctgccgctgt cgcatccact gccccccatg
     3901 tcgatgcccc tgcagctgcc gccctcgtcg tcgtcgtcct ccgcctcttc atcaggagga
     3961 ggaggaatag gaggagttat aggacctggt cacgttggcc aaaggcggca catcagcgga
     4021 cccgcctctg cccaggtgaa tgcagcaggt ggtggcggca gcaacaactc gtctgcggcc
     4081 accggagcag ccagcagcag cgatgcctcc tcgtcgtcgc ccatggtggg cgtttgtgtt
     4141 caacagaatc ctgtagttat acattagcat aaactggata ataatatact tgtattttca
     4201 cacacccttt gccgctctct gctgctattt attgcaccgc caacgccacc acccccacaa
     4261 ccacaaacac aacgaaggaa ccactaaatc accagcgcag cagtgctaaa tgtggcctca
     4321 aatcgggggt cttatctcag gggtaatgct tattgatttt tttaaaatgt tttcatctaa
     4381 atgtattcaa aaagaagctt taaatgattc gagtttgtag gatttgtttt tgtaaaatat
     4441 ttaaaaaatt cagatttaat gtgccaggag tatttatgga atttttaaaa tgttttgatc
     4501 taaatgtttt ccaaagaagc tttaaatgat tcgattatca atttttggtt ttaaattttt
     4561 tatgtatttg atttgacgaa tatttaatcc caaaattatt tcatattttc ttcactagtg
     4621 tttgtgtaca aattgtaaaa ttttcaaatt atcttaaata tttaaaactg atttttgagc
     4681 agaaaaatga ctagttatgc ctttaaactg agaaaatgaa agttaaggtt atatttcctg
     4741 tgagataagg cccccgattt aagcctcaga cgcctaccga aacgaaacta taaatacatt
     4801 aacattaact agctgaaatt gaccctcatg catccacgca aaaaaacaca ccactcaaac
     4861 tcactcaact gcggttttta ctgattagtc acttcacctt agctctcacc gccgctgcgc
     4921 ccacatcatc ggccacgccc cccggcggag gattttgcag agtttatttt ttttacatgc
     4981 tagaacctac cgtttttttt tttttgctct aattataatg tttaatttta tgctgtaacc
     5041 gtaacgacat aacattactt tatataaacg aatcaaaatt acactttatt taattgttaa
     5101 tttaaattat gtaattttat ttgacgagaa atcgctagta atatagaacg caagcaaata
     5161 tgcttaattt aagcaaaa