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LOCUS XM_070219289 7071 bp mRNA linear INV 09-DEC-2024 alpha (Pi4KIIIalpha), transcript variant X1, mRNA. ACCESSION XM_070219289 VERSION XM_070219289.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7071 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7071 /gene="Pi4KIIIalpha" /note="phosphatidylinositol 4-kinase III alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108063860" CDS 291..6737 /gene="Pi4KIIIalpha" /codon_start=1 /product="phosphatidylinositol 4-kinase alpha isoform X1" /protein_id="XP_070075390.1" /db_xref="GeneID:108063860" /translation="MTMTASDKYTYQRTVLCLARVLAGIQPTPWEKVQTLFRYCPQEN AAGVFCLDTRAQDAVIALGIYYLEGGCQHEGQIVPYLLRLAKCLPKAVWIDDARSNKV ERIRIPSAEKFSFCLNTLLSDIAAKCPDSREEIILNQVETLSALANIVKSSRDSSSAP PPIILCKATVPLLFGLARSMGRYASNDPPLLCRIFPPELLPIQKGGGRDGTGGSSSSA SGTCGGSFSSSERLAGATHQFRPIIPRSMSGSLAQAQAQANQNHEDARQGKCHQGSKH QKPSLHSYFSVPYDPRTHFFTRYGSSFNQFPNMRVCESPTKGGPRPLYRVPPFPIQHL QTIFAVSKKLLTKDTLEHLDEQASDIFSLHQIKGYCYKSFSETLNLVLVTLLRELLQH QVDLPTPFTKDVQEFVKRLFLNGQTELQNKQQDQERERREENGIAVVNKYKVNVMANA ACVDLLVWAIRDETVDVDYNVPSLQNGLQFLLKKEADKLCGRLSQKLNLELSHKIVMD HMPLLMVCLEGLGKLAHKFPNIAGTSISYLRDFLVAPSPILNKLHDHAMQSLAQQKKE KELTPFKIAVQHSDSRTAVVIYGDNQKQPSSGTGRSGHAAFEALRDAAIENLSIALRA AHTLDQFCVPALVANVSNRLFTAEKSGSESQGECHKSNLVSLNIIVMLGHVAVALKDT SKTTQNILQFFIQRFCKVPSEQNALIVDQLGCMIISQCETHVFDEIMKMFSRVTVQSA SLAYTSDPEHRKQFHHVSDAVVNALGNIAANIQGDAEMLELLGKLLELFVQIGLDGER SYDNTPGAQKASSRAGNLGMLIPVIAVLVRRLPPIKNPRQRLHKLFKDFWAYCVVMGF TNARLWPADWYQGVQQIAAKSPLLISQTAHKSDMRELNYTLAIKSDSVNELRSQILVL LEHSSDNVATAINKLSFAQCTYLLSVYWLEMLRVENADEPSLEPIMSYLCDTALQRDK TGIWQCVKCVADQVFEKFRNVLYAHDEIREKVLESQATLLLVYFNHIHKPIQVVADQY LSFLVDRFPHLLWNRRVLWCMLDILQLLAYSLSLDPNEETPTLRVVSTPYTLQLMDSL PARELRLKDFADRCQGIVNEAMKWAPRSTRSHLQEYPNQIPTPVLAHHSGLALAFDSV ISSSSSLQTKRPSCVNSDTPRFVSVLCLRSKYAGEISGLLSVLSEKDKAGLADRLVSD VWEACGEKSDARHRGALWRATAYLIICSEIDRKLLHAVASSQLELFTESAMETAVECW QWVLTARQDLELCFIQEMVSAWQTTFEKRMGLFQWETEVTNPLAAYEGCKLVSKPILI TPHLIWLQLLSEMVDTAKYCNRDKVEMFCLLLHRCLPILKSSRQNRQVSTVGCRFKLL QCGLSLLQGNTIPKSLARNILRERIYSNALDYFCGPPTCPNQSREQLLEDIQILLKFW QTMRSEKKHLVTSEVGDYDLTNASVSSTQMLAVRHNPETASLISGSGLVNDYTRSMSA SGNAVGSSGWYNTIPHSTSTLSKRSNRSKRLQYQKDSYDKDYMKKRNLILELLAVELE FLLTWYNPNCLPDLIIPGEEQITEWRNRPYKPNVWRDYARLAWCYNPSLAVFLPQRIK NAEIIDEEVSRLVCSDPIAVCHIPEALKYLCTTKNLLQESPDLVYILSWSPVTPIQAL AYFSRQYPSHPLTAQYAVKTLSSYPAESVLPYIPQLVQALRHDTMGYVVEFIRNISRR SQIVAHQLIWNMQTNMYMDEDQQHRDPNLYEALDQLSLSIIASFSGAAKRFYEREFDF FGKITAVSGEIRSFAKGIERKNACLAALSRIKVQGGCYLPSNPEAMVLDIDYSSGTPM QSAAKAPYLARFRVYRCGITELETRAMEVSNNPNSQEDAKMTLGVESWQAAIFKVGDD VRQDMLALQVITIFKSIFQQVGLDLFLFPYRVVATAPGCGVIECVPNAKSRDQLGRQT DSGLSEYFQHQYGDESSKEFQAARANFVKSMAAYSLIGYLLQIKDRHNGNIMIDKDGH IIHIDFGFMFESSPGGNIGFEPDMKLTDEMVMIMGGKMDSPAFKWFCELCVQAFLAVR PYQDAIVSLVSLMLDTGLPCFRGQTINLLKQRFVATKNNKEAAAHMLAVIRNSYQNFR TRTYDMIQYYQNQIPY" misc_feature 1467..4985 /gene="Pi4KIIIalpha" /note="PI4-kinase N-terminal region; Region: PI4K_N; pfam19274" /db_xref="CDD:437106" misc_feature 5070..5597 /gene="Pi4KIIIalpha" /note="Phosphoinositide 4-kinase(PI4K), accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases. Its role is unclear but it has been suggested to be involved in substrate presentation. PI4K phosphorylates hydroxylgroup at position 4 on the...; Region: PI4Ka; cd00871" /db_xref="CDD:238443" misc_feature 5778..6731 /gene="Pi4KIIIalpha" /note="Catalytic domain of Type III Phosphoinositide 4-kinase alpha; Region: PI4Kc_III_alpha; cd05167" /db_xref="CDD:270711" misc_feature order(5814..5816,5820..5825,5829..5831,5835..5837, 5970..5972,5976..5978,5985..5987,6078..6080,6114..6125, 6138..6140,6147..6149,6312..6314,6318..6320,6348..6353) /gene="Pi4KIIIalpha" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270711" misc_feature 6288..6314 /gene="Pi4KIIIalpha" /note="catalytic loop [active]" /db_xref="CDD:270711" misc_feature order(6351..6383,6390..6401,6402..6419) /gene="Pi4KIIIalpha" /note="activation loop (A-loop); other site" /db_xref="CDD:270711" polyA_site 7071 /gene="Pi4KIIIalpha" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttttcctggg tggaaaacga gttggcagca ctatttggat gtctttccgc cactccgtcg 61 accagcttcg tggccgaaac aacaaaaaac gctgccccag aaaatagtaa tttttgcgag 121 cgaattccaa agatgacgac gaacgcctag cgagattgtt cgcgtcaacc aggagaaccg 181 aaccgaaacg aaacgaacga acggaggagg agcaggtggc cgccagtggg aggaggagga 241 ggaggagcag cgagcgagcg aggagcggga gcgggagcgg gaacggagca atgacgatga 301 ccgcctcgga taaatacacg taccagcgga cggtcctgtg cttggcccgc gtgctggcgg 361 ggatccagcc cactccctgg gagaaggtgc agaccctgtt ccgatattgc ccgcaggaga 421 atgccgccgg ggtgttctgc ctggacacgc gggcccagga tgccgtgatc gccctgggga 481 tctactattt ggagggaggc tgccagcacg agggccagat tgtgccctac ctgctgcgcc 541 tggccaagtg cctgcccaag gcggtctgga tcgatgatgc gcgcagcaac aaagtggaac 601 gtattcgcat tccctcggct gagaagttca gcttctgcct gaacaccctg ctctccgaca 661 tagcggccaa gtgcccggat tcccgcgagg agatcatcct caatcaggtg gagacgctga 721 gtgccctggc caacatagtc aagtcgagca gggacagcag ctcggccccg cctccgatta 781 tcctgtgcaa ggccacggtg ccgctgctct ttggactggc ccgctcgatg ggtcgctatg 841 ccagcaacga tcctccgctg ctctgccgca tctttccgcc cgagctgctg cccatccaga 901 agggcggcgg acgcgacggc accggcggct cgagcagcag tgccagcggc acctgcggcg 961 gctccttcag cagcagcgag cgactggcgg gcgccacgca ccagttccga cccatcatac 1021 cgcgctccat gtcgggcagc ctggctcagg cgcaggcgca ggccaaccag aaccacgagg 1081 atgcgaggca gggaaagtgc caccagggaa gcaagcacca gaagccctcg ctgcacagct 1141 acttctccgt gccgtacgac ccgcggacgc acttcttcac gcgctacggc tccagcttca 1201 accagttccc caacatgcgc gtctgcgagt cgccgacgaa gggcggcccg cgtcccctgt 1261 accgcgtgcc gccgttcccc atccagcacc tgcagaccat attcgcggtg tccaagaagc 1321 tgctcaccaa ggacacgctg gagcacctgg acgagcaggc cagcgacatc ttctcgctgc 1381 accagatcaa gggctactgc tacaagagct tctcggagac gctgaatctg gtgctggtca 1441 ccctgctgcg cgagctgctg cagcatcagg tggacctgcc gacgcccttc accaaggacg 1501 tgcaggagtt cgtgaagcgg ctgttcctga acgggcagac ggagctgcag aacaagcagc 1561 aggatcagga gcgcgagcgg cgcgaggaga acggcatcgc ggtggtcaac aagtacaagg 1621 tcaatgtgat ggccaatgcg gcgtgcgtcg atctgctggt ttgggccatt cgcgacgaga 1681 cggttgacgt cgactataat gtgccatccc tgcagaatgg cttgcaattt ttattgaaga 1741 aagaggcgga caagctgtgc ggccggctgt cgcagaagct gaacctggag ctgagccaca 1801 agatcgtgat ggaccacatg ccgctgctga tggtctgcct ggagggtctg ggcaagctgg 1861 cccacaagtt tcccaacata gccggcacct cgatctcgta tctgcgcgac ttcctggtgg 1921 cgcccagtcc gatcctcaac aagctccacg accacgccat gcagtcgctg gcccagcaga 1981 agaaggagaa ggagctgact ccgttcaaga tcgctgtcca gcactcggac tcgaggacgg 2041 cggtcgtgat ctacggggac aaccagaagc agccgagctc gggcaccgga agaagtggtc 2101 atgccgcctt cgaggctctg cgcgatgcgg ccatcgagaa tctgtcgatt gccctgcgag 2161 ctgcccacac tctggaccag ttctgtgtcc ccgccctggt ggccaacgtg tccaatcggc 2221 tcttcaccgc cgagaagtct gggagtgaat cgcagggcga gtgccacaag tcgaacctgg 2281 tcagcctgaa catcatcgtg atgctgggcc acgtggccgt ggcgctgaag gacacctcga 2341 agacgacgca gaacatcctg cagttcttca tccagcgctt ctgcaaggtg ccctcggagc 2401 agaacgccct gatcgtcgac cagctgggct gcatgataat ctcgcagtgc gagacgcacg 2461 tcttcgacga gatcatgaag atgttctcgc gcgtcaccgt gcagtcggcc tcgctggcct 2521 acacctcgga tccggagcac cgcaagcagt tccaccacgt ctccgatgcg gtggtcaatg 2581 ccttgggcaa catagcggcc aacattcagg gcgacgccga gatgctggag ctgctgggca 2641 agctgctcga gctgtttgtg cagatcgggc tggacggcga gcgcagctac gacaatacac 2701 cgggcgccca gaaggccagc tcgcgggccg gcaatctggg catgctgata ccggtgattg 2761 cggtactggt gcgccgcctg ccgccgatca agaatccccg ccagcggctg cacaagctct 2821 tcaaggactt ctgggcctac tgcgtcgtga tgggcttcac caatgcccgt ttgtggccgg 2881 ccgactggta ccagggtgtc cagcagatcg cggccaagtc gccgctgctc atctcgcaga 2941 cggcccacaa gtcggacatg cgggagctca actacacgct ggccatcaag agcgactcgg 3001 tgaacgagct gcgcagccag atcctcgtgc tgctcgagca ctcctcggac aacgtggcca 3061 cggccatcaa caagctgtcc tttgcccagt gcacctacct gctgagcgtc tactggctgg 3121 agatgctgcg cgtggagaac gcggatgagc cgagtctgga gcccatcatg agctaccttt 3181 gcgacacggc tctgcagagg gacaaaacgg gcatttggca gtgcgtcaag tgcgttgccg 3241 accaggtctt cgagaagttc cgcaacgtgc tgtacgccca cgacgagatc cgcgagaagg 3301 tgctggagtc gcaggccacc ctgctgctgg tctacttcaa ccacatccac aagcccatcc 3361 aggtggtggc cgatcagtat ctctccttcc tggtcgaccg ttttccccac ctcctctgga 3421 atcgccgcgt gctctggtgc atgctggaca tcctccagct gctcgcctac tcccttagcc 3481 tggatcccaa cgaggagacg cctacgctgc gggtggtgtc cactccctac acgctgcagc 3541 tgatggactc gctgcccgcg agggagttgc gcttaaagga ctttgccgat cgctgtcagg 3601 gcatcgtgaa cgaggccatg aagtgggctc ctcgctccac gaggtcgcat ttgcaggagt 3661 atcccaacca gatacccacg cccgtgttgg ctcaccacag cggactggct ttggccttcg 3721 attcggtgat cagcagcagc agtagcctac aaaccaaacg gcccagctgc gtcaactcgg 3781 acacgccgag attcgtctcg gtcctctgcc tgcgcagcaa gtacgccggc gagatcagcg 3841 gcctgctgtc cgtgctgagc gagaaggaca aggcggggct cgcggatcgg ctggtcagcg 3901 atgtgtggga ggcctgcggc gagaagagcg acgcccggca tcgcggagct ctgtggcgag 3961 ccaccgccta cctgatcatc tgctcggaga ttgacaggaa gctcctgcat gccgtggcca 4021 gttcgcagct ggagctgttc accgagtcgg cgatggagac ggccgtcgag tgctggcaat 4081 gggtgctcac ggctcgacag gatctggagc tgtgcttcat ccaggagatg gtcagcgcct 4141 ggcagacgac gttcgagaag cgaatgggct tgtttcaatg ggaaacggag gtcaccaacc 4201 cgctggccgc ctacgagggc tgcaagctgg tcagcaagcc catcctaata accccccatc 4261 tcatctggct gcagctgctc tccgagatgg tggacacggc caagtactgc aaccgggaca 4321 aggtggagat gttctgcctg ctgctgcacc gatgtcttcc cattctgaag agcagccggc 4381 agaaccgcca ggtgtccacg gtgggctgtc gcttcaagct gctgcagtgc ggcctctcgc 4441 tgctgcaggg caatacgata cccaagtcgc tggccaggaa catcctgcgc gagaggatct 4501 actccaatgc cctggactac ttctgcggcc cacctacctg ccccaatcag agcagggagc 4561 agctgctgga ggacatacag atactgctca agttctggca gacgatgcgc agcgagaaga 4621 agcacctggt cacctccgag gtgggcgact acgacctcac gaacgcctct gtcagctcca 4681 cccagatgct ggccgtgcgc cacaacccgg aaacggcctc cctgatcagc ggcagtggcc 4741 tggtcaacga ctacacccgc tccatgagcg ccagcggcaa tgcggtgggc agcagcggct 4801 ggtacaacac cattccccac tcgacctcca ccctgtccaa gcgttcgaat cgctccaagc 4861 ggctgcagta ccagaaggac tcgtacgaca aggactacat gaagaagcgc aatttgatcc 4921 tcgagctgct ggccgtcgag ctggagttcc tcctgacctg gtacaacccg aattgcctgc 4981 cggatctgat aattcccggc gaggagcaga tcaccgagtg gcgcaaccgg ccgtacaagc 5041 cgaacgtctg gcgggactac gcccgcctcg cctggtgcta caatccctcg ctggccgtct 5101 tcctgccgca gcgcatcaag aacgcggaga tcatcgacga ggaggtgtcg cggctggtct 5161 gctccgatcc catagccgtt tgtcatatac cggaggccct gaagtacctg tgcaccacca 5221 agaacctgct gcaggagagc cccgatctgg tgtacatcct ctcctggtcg ccggtgacgc 5281 ccatccaggc gctggcctac ttctcgcgcc agtatccctc gcacccgctg accgcccagt 5341 acgcggtgaa gacgctctcc tcgtaccccg ccgaatcggt gctcccgtat atcccgcagc 5401 ttgtgcaggc cctgcggcac gacaccatgg gctatgtggt ggagttcata aggaacatct 5461 cgcggcgctc gcagatcgtg gcgcatcagc tgatctggaa catgcagacg aacatgtaca 5521 tggacgagga ccagcagcac agggatccca atctctacga ggccttggat cagctgtcgc 5581 tcagtattat cgcctcgttc tcgggcgccg ccaagcggtt ctacgagcgc gagttcgact 5641 ttttcggcaa gataaccgcc gtctccgggg aaattcgctc ctttgccaag ggcatcgagc 5701 gcaagaacgc ctgcctggcg gcgctcagcc ggatcaaggt gcagggcggc tgctacctgc 5761 cctccaatcc ggaggccatg gtcctggaca tcgactacag cagcggcacg cccatgcaga 5821 gtgccgccaa ggcgccgtac ttggcccgct tccgggtgta tcgctgcggc atcacggagc 5881 tggagacgcg cgccatggag gtgtcaaata atccgaactc ccaggaggac gccaagatga 5941 cgctgggcgt cgagtcctgg caggcggcca tcttcaaggt gggcgacgat gtgcgccagg 6001 acatgctggc cctccaggtg atcaccatct tcaagagcat cttccagcag gtgggactcg 6061 acctcttcct gttcccctac cgcgtggtgg ccaccgctcc agggtgcggc gtcatcgagt 6121 gcgtgccgaa tgccaagtcg cgggatcagc tcggccggca gacggacagc ggactctcgg 6181 agtacttcca gcaccagtac ggcgacgaga gctccaagga gttccaggcg gcccgggcca 6241 actttgtcaa gtcgatggcc gcctactcgc tgatcggcta tctgctccag attaaggatc 6301 gccacaatgg caacatcatg atcgacaagg atggccacat aatacacata gattttggct 6361 tcatgttcga gtcctcgccg ggcggcaata tcggcttcga gcccgatatg aagctgaccg 6421 acgagatggt catgatcatg ggcggcaaga tggactcgcc ggccttcaag tggttctgcg 6481 agctgtgcgt gcaggccttc ctcgccgtgc ggccctacca ggatgcgatt gtctcgctgg 6541 tctccctgat gctggacacc gggctgccgt gcttccgcgg ccagacgatc aacctgctga 6601 agcagcgctt cgtggccacc aagaacaaca aggaggcggc cgcccacatg ctggccgtca 6661 tccgaaactc gtaccagaac ttccgcacgc gtacctacga catgatccag tactaccaga 6721 accagatacc ctactaaata atcaagtgaa accggaaccc caatacaggc gcctcatgtt 6781 cgttgttcgt tggccaaaag acacttaaga atacactacg caacctacaa aaatccgcaa 6841 tccgtaatcc ggaatccgaa atcccttatc cgtattatta atgttttgtc gccgcacccg 6901 tattcgtatt ccttaacctt tatcccgtaa tttccgagag tgtgtttctt tctgtttcgc 6961 gtacttataa gatgttgaac tttttccaag attttacgac gcatatattc gttatacaat 7021 atttataaat attaaatcaa ttatagggca atatgttata taatggtaaa a