PREDICTED: Drosophila takahashii Tubulin tyrosine ligase-like 1A

LOCUS       XM_070219286            1766 bp    mRNA    linear   INV 09-DEC-2024
            (TTLL1A), transcript variant X1, mRNA.
ACCESSION   XM_070219286
VERSION     XM_070219286.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1766
                     /gene="TTLL1A"
                     /note="Tubulin tyrosine ligase-like 1A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:108064119"
     CDS             112..1602
                     /gene="TTLL1A"
                     /codon_start=1
                     /product="polyglutamylase complex subunit TTLL1 isoform
                     X1"
                     /protein_id="XP_070075387.1"
                     /db_xref="GeneID:108064119"
                     /translation="MKGQTSALRNLRQKCGGSCTSDDDLPEVKITNPSPLMGVQFIRS
                     RLRPTKSQKGIYYSTDWEKSALVSNFQKRGWLQVPSFNGEWNFYWACTQNCRYIFGID
                     HPYRMRSDQSSIPRVINHFPNSVELSRKDLLIKNIKRYRKDLERRGDPLAQSHPPDTK
                     LGVGGTRYKHLDIIPMTFVLPSDYQMFVEVFHRNPASTWIVKPCSKSQGVGIYLVNKL
                     SKLKKYAYDARTFYPQINRDTCVISKYIDNPLLIGGKKFDLRLFVLVTTFNPLKAYLY
                     KEGFCRFCTEKYDHTEIDNVFMHLTNVSIQKTNQEYNSIHGGKWPLQNLWLYLDSLRG
                     EGISEMLWSRITDTIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPS
                     MHSTTTNDRMLKSRLIDNVLDVVVPPNSLPDEHWDKTPSPELLKNFTVLQPIPASKPP
                     AEELVRRKGRSPRKRKTKSLPAAGSSTPPPAEGESKIRKSTKAVKR"
     misc_feature    460..1368
                     /gene="TTLL1A"
                     /note="Tubulin-tyrosine ligase family; Region: TTL;
                     pfam03133"
                     /db_xref="CDD:397308"
     polyA_site      1766
                     /gene="TTLL1A"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gccaaaacta gattgtcagc aactaaacaa cgatcgtctc gaaatcgggg gaaaaattct
       61 cagtattata gtgtagagtt ggagaccgag agagaccata aacggcccaa aatgaagggc
      121 cagacgagtg ctttgaggaa tcttcgccag aaatgcggcg gcagttgcac cagtgacgat
      181 gacctgccgg aggtgaagat aaccaatcca tcgccactca tgggagtgca gttcatacgc
      241 agtcgcttga ggccaacgaa gtcccagaag ggcatctact acagcacgga ctgggagaaa
      301 tcggcgctgg tcagtaattt ccagaaaagg ggctggctgc aggtgccgtc cttcaatggc
      361 gaatggaact tctactgggc ctgtacccag aattgccgct acattttcgg catcgatcat
      421 ccgtatcgca tgcgatcgga tcaatcatcc atccccagag tcattaacca ctttccaaac
      481 tccgtggagc tgtcgcgcaa ggatctgctg atcaagaaca tcaagcggta ccgcaaggat
      541 ctggaacgac gtggcgatcc gctggcccag agccatccgc cagacacgaa actcggagta
      601 ggtgggaccc ggtacaagca cctggacatc atacccatga cctttgtcct gccctccgac
      661 taccagatgt tcgtcgaggt cttccatcgc aatccggcga gcacgtggat cgtcaagccg
      721 tgcagcaaat cacagggcgt gggcatctat ctggtgaaca agctgtccaa gctgaagaag
      781 tacgcctacg atgcgcgcac cttctatccg cagatcaata gggacacctg cgtcatctcc
      841 aagtacatcg acaatccgct gctcatcggc ggcaagaaat tcgatctgcg actcttcgtc
      901 ctggtgacca ccttcaatcc gctgaaggcg tatctctaca aggagggctt ctgccgcttc
      961 tgcaccgaga agtacgacca caccgagatc gacaatgtct ttatgcacct caccaatgtt
     1021 agcatacaaa aaacgaacca agagtacaac tcgatccatg gtggcaagtg gcccttgcag
     1081 aatctgtggc tctatttgga cagcctgcgg ggcgagggca tttcggagat gctgtggagc
     1141 cgcatcaccg acaccatccg tcactccctg gacgcagtgg ctccggtgat ggccaacgat
     1201 cggcactgtt tcgaggtcta cggctatgac atcatcatcg acaataacct gaagccctgg
     1261 ctgatcgaga tcaatacgtc gccatcgatg cactcgacca ccacgaacga tcgcatgctc
     1321 aagtcgcggc taatagacaa cgtcctggac gtggtggtgc cgccaaatag tttgccagat
     1381 gagcactggg acaagacgcc cagtccggag ctcctgaaga acttcaccgt gctgcagccc
     1441 attccggcgt caaagccgcc agcggaggag ctcgtgcgac gcaagggcag atcgcccagg
     1501 aaaagaaaga ccaaatccct cccagccgcc ggctcatcca ctccaccgcc cgccgaagga
     1561 gagtccaaga taagaaagag caccaaggca gtgaagagat gaagctgaag tgtcgtctgt
     1621 cgtcagtcgt tggttgtcat atagaaaatc gaacagctcg aatggtttat gaaaatttgt
     1681 aacttttaat tcgcaactcg gtattcggta tcgcacaaat tacttaggaa gtacacaaaa
     1741 ttaaagtatc gtatatattc gctata