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LOCUS XM_070219280 4055 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_070219280 VERSION XM_070219280.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4055 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4055 /gene="su(sable)" /note="suppressor of sable; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063857" CDS 81..3569 /gene="su(sable)" /codon_start=1 /product="protein suppressor of sable isoform X3" /protein_id="XP_070075381.1" /db_xref="GeneID:108063857" /translation="MVLFSWLQPSQKRSRREDGDVSSVAGGAGSDDMDMEYEMMNVRG GSPPPGGVAPPSSGGGGGGHWDDGSGAGGGGGGGGGYDSQQDPYSSYDSYSEEEASAA PGLMNQRRRMRREREKEQQQRGGNNRKRRDRDRHEGAGGGGAKRNRRDSGGEGGGAGG GGQMEKMGGGGGGGGGGRIEPRKLELCKFYLMDCCAKRDKCSYMHKEFPCKYYYLGMD CYAGDDCLFHHGEPLTEQLRNILLKHMETAPKEILGDFKRISRDIAMGQMTRRHEQLC EQFKRENTWSMMGNAGMGRRQDQQQQHMQMQQQQQQQMQQQQQQMQQQQEQQQQQQQA GAECIPSLLDMVINPPHPEKKRKSRWADKTAAKAAAAAAVAAPETGNTSPAAKPLPPH LDLANLSHVLSAENMAKLNKLGITNLEQMLQVPFGQLTEAGLTLVELGEIQRKAEDAK PQTTQTETPVSTPVAKPETEASNSNSNSNGFIMVDYTQYLKDAHVSFSGNDPLDDDRD DDEQLVIDDGNESTAEEEQPASKQQVAKAPPVARQDSASAEEAPLPSVFDLPSFMSNM LQQAGQASSQQLLPASATSPTQETATGQLEPSGGPKSGVPPSSSTNVFSRILFGDKQA DPEARAAFYRDIIRNPFKAHSGDGDVDSANENSNSNSRSLTPTPTPEPGSQSPKQEEM PELPAITPVLPPTTPSLYVRPSMYDFDPSKVEELQRPEAGEELRQRDTDMRLPFEPMK HYMPATEIDAAIFSHTPLRWQLQEVSVEEASYAQIRLSAQHKEQRDLRDPRMRRILGL PEMPDNGGVLGSMGGSLSGGGGGSSSSISDSFGRSGATIASPESDTNAIRDATPSSPP PTLAHLPSMSVPPPSMSVPPPSLPVEKPQVRADPRRDPRRAHLQAQAQAQAQANPAPA TTSNATGGSKQISEIRSLMQSSNWYKNLGSNNKIMVNQQLALVFTELKKFHQLPEDAP KIFDVGFIVNSPTLQQIFAKLYIFVDDNGQVVQMPEENNSVGGAAAGGGGGVVLPNLS QPPPNLAQMLRVPPPNIRMLRMSGMMMQMGAPLFNQPPPRAGLLGMPPNGGNQGGGPG PVPNGNPFNPFAGGAGNNGGGGGGGGNNMGNMGMPFKNFNNGNNNNNNNNGGGRGGHF PGGGGGGNNRNQRGRR" misc_feature <1653..2303 /gene="su(sable)" /note="104 kDa microneme/rhoptry antigen; Provisional; Region: PTZ00449" /db_xref="CDD:185628" polyA_site 4055 /gene="su(sable)" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gattgttttc ccatatagat cactcccttg tctttagttt ccgtctttag tttggcatca 61 gctagcaact tgattgctgc atggttctgt ttagctggct gcaacccagc cagaaacggt 121 cgcgccgtga agatggcgac gtgtccagcg tggcgggcgg tgctggcagt gatgacatgg 181 acatggagta cgagatgatg aacgtgcgcg gcggcagtcc gccgcccgga ggagtagcac 241 ctccctcctc cggcggcggt ggtggtggtc attgggacga cggctctggc gcgggcggag 301 gaggcggcgg cggtggaggc tacgactcgc agcaggaccc ctacagcagc tacgattcct 361 actccgagga ggaggcatcc gcggcacctg ggctgatgaa tcagcggcgg cgaatgcgac 421 gggaaaggga gaaggagcag cagcagcggg gtggcaacaa tcgcaagcgg agggatcgcg 481 atcgccacga gggcgccggc ggaggaggag ccaagcgaaa tcgccgcgac tcgggaggcg 541 agggaggagg tgccggcggc ggtggacaga tggagaagat gggcggcggc ggcggcggag 601 gcggcggtgg tcgcattgaa ccccgcaagc tggagctgtg caagttctat ctgatggact 661 gctgtgccaa gcgcgacaag tgctcctaca tgcacaagga gttcccctgc aagtactact 721 acctgggcat ggactgctat gccggcgacg actgcctctt ccatcacggc gaaccgctga 781 ccgagcagct gcgcaacatc ctgctgaagc acatggagac ggcgcccaag gagatcttgg 841 gtgactttaa gcgaatatcg agggacattg ccatgggcca gatgacgcga cggcacgagc 901 agttgtgcga gcagttcaag cgggagaaca cctggagcat gatgggcaat gcggggatgg 961 gcaggcgaca ggatcagcag cagcagcaca tgcagatgca gcagcagcag cagcaacaga 1021 tgcagcagca acaacaacag atgcagcagc agcaggagca acagcagcag caacaacagg 1081 cgggtgccga gtgcattccc tcgctcctgg acatggtcat caatccgccg catccggaga 1141 agaagcgaaa gtcccgctgg gctgacaaaa cggccgccaa ggcggcagcg gcagcagcag 1201 tagctgcccc agaaacgggc aacacatcgc cggcggccaa gccattgcca cctcacctgg 1261 acctggccaa cctcagtcac gtcctgagtg ccgagaacat ggccaagctg aacaagctgg 1321 gcatcaccaa cctggagcag atgctgcagg tgccctttgg ccagctaacc gaggcggggc 1381 tcacgctagt cgagctgggc gagattcagc gcaaggcgga ggacgccaag ccacagacaa 1441 cccaaaccga aacgccagtc agcactcccg ttgcgaagcc agaaacggag gccagcaaca 1501 gcaactccaa cagcaatggc ttcatcatgg tggactacac gcagtatctg aaggatgcac 1561 atgtcagctt ctcgggcaac gatccgctgg acgacgatcg cgatgacgac gaacaactgg 1621 tcatagacga tggcaacgag tccaccgccg aggaggagca gccggcaagc aaacagcagg 1681 tggccaaggc gccgccagtc gctcgtcagg actctgcctc cgccgaggag gcgccgctgc 1741 cctccgtctt cgatttgccc agcttcatga gcaacatgct ccagcaggca ggtcaggcat 1801 ccagccagca gcttctgccg gccagtgcca cgtcgcccac ccaggagacg gcaactggcc 1861 agctggagcc atcggggggc cccaagtcgg gggtgccgcc gagcagctcc accaatgtgt 1921 tcagccggat tctgttcggc gacaagcagg cggatcccga ggccagggcg gccttctacc 1981 gcgacatcat ccgcaatccc ttcaaggcgc acagcggcga cggggacgtg gactcggcca 2041 atgagaactc caactccaat tcgcgctcgc tgacgccgac gcccacgccg gaaccgggat 2101 cgcagtcgcc caagcaggag gagatgcccg agttgcctgc cattacgcct gtgctgccgc 2161 ccacgacgcc ctcgctctac gtgcgtccct ccatgtacga ctttgaccca tccaaggtgg 2221 aggagctgca gcgaccggag gcgggcgagg agctgcgcca gcgggacacg gacatgcgac 2281 tgccgttcga gccgatgaaa cactatatgc ccgccaccga aatcgatgcg gccatcttct 2341 cgcacacgcc gcttcgctgg cagctgcagg aggtgtccgt ggaggaggcc agctacgcgc 2401 agatccggct gagtgcccag cacaaggagc agcgcgacct gagggatccc cgcatgcgtc 2461 gcatcctcgg gctgcccgag atgccggata atggaggagt cctgggttca atgggaggca 2521 gcttatcggg aggaggcgga ggaagctcct cctcgatcag cgactccttt ggccgttccg 2581 gggcgaccat agcctcgccg gagtcggata cgaacgcgat acgcgatgcc acgcccagtt 2641 ctccgccccc gacgctggcc catctgccct ccatgagcgt accgccgcca tcgatgagcg 2701 tgccgccgcc cagtctgccc gtggagaagc cccaagtgcg ggcagatccg cgtcgcgatc 2761 ccaggagagc ccaccttcag gcgcaggcgc aggcgcaggc tcaggcgaat cccgctcctg 2821 ccaccacatc gaatgccacc gggggcagca agcagatctc cgagatccgc agcctcatgc 2881 agagctccaa ctggtacaag aacctgggca gcaacaacaa gatcatggtc aaccagcagc 2941 tcgccttggt cttcaccgag ctcaagaagt tccaccagct gcccgaggat gccccgaaga 3001 tcttcgacgt gggcttcatc gtgaacagcc ccacgttgca gcagatcttt gccaagctct 3061 acatctttgt ggacgacaat ggtcaggtgg tgcagatgcc cgaggagaat aattcagtgg 3121 gtggagcagc agcaggcggc ggaggaggag tggtgctgcc gaatctatcg caacctccac 3181 caaatctggc tcagatgtta agggtaccac cgccgaatat acgaatgcta cgcatgtcgg 3241 gaatgatgat gcaaatgggg gcgcctctgt tcaatcagcc acctccacga gctggactgc 3301 tgggaatgcc acccaatgga ggaaaccagg gtggaggacc aggacctgtg cccaatggca 3361 atccctttaa tccctttgcg ggcggagcgg gcaacaatgg aggaggcggc ggaggaggag 3421 gaaacaacat gggcaacatg ggcatgccct tcaagaattt caacaacgga aataacaaca 3481 acaataacaa caatgggggc ggcagaggtg gacactttcc aggtggagga ggaggaggaa 3541 acaatcgcaa tcagcggggg aggcggtaat cagcgagtgt cgccaggata aaccaacaac 3601 ataaaagact tgttatgcca aaatgatgtt gatgttatgc cccatgaccc atgccccatt 3661 taccccaagt aacccggcct tgtttctccc cccactccta tttttttttt atagagaatc 3721 cgggcttcga ctgctttgta cattgtattc tattctattc cttaattccc catcattgtc 3781 actatttttt tggctaggtg taaggacgag cccttatagc atgtagccct actacgtact 3841 gataaatgta gttaatagta aaacgagaaa aacagagaaa cttaagaagg aaaagctgag 3901 gaacaggaac agaaacagaa agtcaagtag aattggtatg tgaccttttt taccgagctc 3961 ttttgaataa cgtaggatta aactgtttat ttgtgcgtgt actacattga taaactagac 4021 ataccaacta caaataaata acatgtttta agtaa