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LOCUS XM_070219279 4044 bp mRNA linear INV 09-DEC-2024 transcript variant X3, mRNA. ACCESSION XM_070219279 VERSION XM_070219279.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4044 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4044 /gene="su(sable)" /note="suppressor of sable; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063857" CDS 16..3558 /gene="su(sable)" /codon_start=1 /product="protein suppressor of sable isoform X2" /protein_id="XP_070075380.1" /db_xref="GeneID:108063857" /translation="MVLFSWLQPSQVGINIRQGPRNPFPGQGIKRSRREDGDVSSVAG GAGSDDMDMEYEMMNVRGGSPPPGGVAPPSSGGGGGGHWDDGSGAGGGGGGGGGYDSQ QDPYSSYDSYSEEEASAAPGLMNQRRRMRREREKEQQQRGGNNRKRRDRDRHEGAGGG GAKRNRRDSGGEGGGAGGGGQMEKMGGGGGGGGGGRIEPRKLELCKFYLMDCCAKRDK CSYMHKEFPCKYYYLGMDCYAGDDCLFHHGEPLTEQLRNILLKHMETAPKEILGDFKR ISRDIAMGQMTRRHEQLCEQFKRENTWSMMGNAGMGRRQDQQQQHMQMQQQQQQQMQQ QQQQMQQQQEQQQQQQQAGAECIPSLLDMVINPPHPEKKRKSRWADKTAAKAAAAAAV AAPETGNTSPAAKPLPPHLDLANLSHVLSAENMAKLNKLGITNLEQMLQVPFGQLTEA GLTLVELGEIQRKAEDAKPQTTQTETPVSTPVAKPETEASNSNSNSNGFIMVDYTQYL KDAHVSFSGNDPLDDDRDDDEQLVIDDGNESTAEEEQPASKQQVAKAPPVARQDSASA EEAPLPSVFDLPSFMSNMLQQAGQASSQQLLPASATSPTQETATGQLEPSGGPKSGVP PSSSTNVFSRILFGDKQADPEARAAFYRDIIRNPFKAHSGDGDVDSANENSNSNSRSL TPTPTPEPGSQSPKQEEMPELPAITPVLPPTTPSLYVRPSMYDFDPSKVEELQRPEAG EELRQRDTDMRLPFEPMKHYMPATEIDAAIFSHTPLRWQLQEVSVEEASYAQIRLSAQ HKEQRDLRDPRMRRILGLPEMPDNGGVLGSMGGSLSGGGGGSSSSISDSFGRSGATIA SPESDTNAIRDATPSSPPPTLAHLPSMSVPPPSMSVPPPSLPVEKPQVRADPRRDPRR AHLQAQAQAQAQANPAPATTSNATGGSKQISEIRSLMQSSNWYKNLGSNNKIMVNQQL ALVFTELKKFHQLPEDAPKIFDVGFIVNSPTLQQIFAKLYIFVDDNGQVVQMPEENNS VGGAAAGGGGGVVLPNLSQPPPNLAQMLRVPPPNIRMLRMSGMMMQMGAPLFNQPPPR AGLLGMPPNGGNQGGGPGPVPNGNPFNPFAGGAGNNGGGGGGGGNNMGNMGMPFKNFN NGNNNNNNNNGGGRGGHFPGGGGGGNNRNQRGRR" misc_feature <1642..2292 /gene="su(sable)" /note="104 kDa microneme/rhoptry antigen; Provisional; Region: PTZ00449" /db_xref="CDD:185628" polyA_site 4044 /gene="su(sable)" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caacttgatt gctgcatggt tctgtttagc tggctgcaac ccagccaggt gggtataaat 61 ataaggcagg gtccaaggaa cccgtttcca ggacaaggaa ttaaacggtc gcgccgtgaa 121 gatggcgacg tgtccagcgt ggcgggcggt gctggcagtg atgacatgga catggagtac 181 gagatgatga acgtgcgcgg cggcagtccg ccgcccggag gagtagcacc tccctcctcc 241 ggcggcggtg gtggtggtca ttgggacgac ggctctggcg cgggcggagg aggcggcggc 301 ggtggaggct acgactcgca gcaggacccc tacagcagct acgattccta ctccgaggag 361 gaggcatccg cggcacctgg gctgatgaat cagcggcggc gaatgcgacg ggaaagggag 421 aaggagcagc agcagcgggg tggcaacaat cgcaagcgga gggatcgcga tcgccacgag 481 ggcgccggcg gaggaggagc caagcgaaat cgccgcgact cgggaggcga gggaggaggt 541 gccggcggcg gtggacagat ggagaagatg ggcggcggcg gcggcggagg cggcggtggt 601 cgcattgaac cccgcaagct ggagctgtgc aagttctatc tgatggactg ctgtgccaag 661 cgcgacaagt gctcctacat gcacaaggag ttcccctgca agtactacta cctgggcatg 721 gactgctatg ccggcgacga ctgcctcttc catcacggcg aaccgctgac cgagcagctg 781 cgcaacatcc tgctgaagca catggagacg gcgcccaagg agatcttggg tgactttaag 841 cgaatatcga gggacattgc catgggccag atgacgcgac ggcacgagca gttgtgcgag 901 cagttcaagc gggagaacac ctggagcatg atgggcaatg cggggatggg caggcgacag 961 gatcagcagc agcagcacat gcagatgcag cagcagcagc agcaacagat gcagcagcaa 1021 caacaacaga tgcagcagca gcaggagcaa cagcagcagc aacaacaggc gggtgccgag 1081 tgcattccct cgctcctgga catggtcatc aatccgccgc atccggagaa gaagcgaaag 1141 tcccgctggg ctgacaaaac ggccgccaag gcggcagcgg cagcagcagt agctgcccca 1201 gaaacgggca acacatcgcc ggcggccaag ccattgccac ctcacctgga cctggccaac 1261 ctcagtcacg tcctgagtgc cgagaacatg gccaagctga acaagctggg catcaccaac 1321 ctggagcaga tgctgcaggt gccctttggc cagctaaccg aggcggggct cacgctagtc 1381 gagctgggcg agattcagcg caaggcggag gacgccaagc cacagacaac ccaaaccgaa 1441 acgccagtca gcactcccgt tgcgaagcca gaaacggagg ccagcaacag caactccaac 1501 agcaatggct tcatcatggt ggactacacg cagtatctga aggatgcaca tgtcagcttc 1561 tcgggcaacg atccgctgga cgacgatcgc gatgacgacg aacaactggt catagacgat 1621 ggcaacgagt ccaccgccga ggaggagcag ccggcaagca aacagcaggt ggccaaggcg 1681 ccgccagtcg ctcgtcagga ctctgcctcc gccgaggagg cgccgctgcc ctccgtcttc 1741 gatttgccca gcttcatgag caacatgctc cagcaggcag gtcaggcatc cagccagcag 1801 cttctgccgg ccagtgccac gtcgcccacc caggagacgg caactggcca gctggagcca 1861 tcggggggcc ccaagtcggg ggtgccgccg agcagctcca ccaatgtgtt cagccggatt 1921 ctgttcggcg acaagcaggc ggatcccgag gccagggcgg ccttctaccg cgacatcatc 1981 cgcaatccct tcaaggcgca cagcggcgac ggggacgtgg actcggccaa tgagaactcc 2041 aactccaatt cgcgctcgct gacgccgacg cccacgccgg aaccgggatc gcagtcgccc 2101 aagcaggagg agatgcccga gttgcctgcc attacgcctg tgctgccgcc cacgacgccc 2161 tcgctctacg tgcgtccctc catgtacgac tttgacccat ccaaggtgga ggagctgcag 2221 cgaccggagg cgggcgagga gctgcgccag cgggacacgg acatgcgact gccgttcgag 2281 ccgatgaaac actatatgcc cgccaccgaa atcgatgcgg ccatcttctc gcacacgccg 2341 cttcgctggc agctgcagga ggtgtccgtg gaggaggcca gctacgcgca gatccggctg 2401 agtgcccagc acaaggagca gcgcgacctg agggatcccc gcatgcgtcg catcctcggg 2461 ctgcccgaga tgccggataa tggaggagtc ctgggttcaa tgggaggcag cttatcggga 2521 ggaggcggag gaagctcctc ctcgatcagc gactcctttg gccgttccgg ggcgaccata 2581 gcctcgccgg agtcggatac gaacgcgata cgcgatgcca cgcccagttc tccgcccccg 2641 acgctggccc atctgccctc catgagcgta ccgccgccat cgatgagcgt gccgccgccc 2701 agtctgcccg tggagaagcc ccaagtgcgg gcagatccgc gtcgcgatcc caggagagcc 2761 caccttcagg cgcaggcgca ggcgcaggct caggcgaatc ccgctcctgc caccacatcg 2821 aatgccaccg ggggcagcaa gcagatctcc gagatccgca gcctcatgca gagctccaac 2881 tggtacaaga acctgggcag caacaacaag atcatggtca accagcagct cgccttggtc 2941 ttcaccgagc tcaagaagtt ccaccagctg cccgaggatg ccccgaagat cttcgacgtg 3001 ggcttcatcg tgaacagccc cacgttgcag cagatctttg ccaagctcta catctttgtg 3061 gacgacaatg gtcaggtggt gcagatgccc gaggagaata attcagtggg tggagcagca 3121 gcaggcggcg gaggaggagt ggtgctgccg aatctatcgc aacctccacc aaatctggct 3181 cagatgttaa gggtaccacc gccgaatata cgaatgctac gcatgtcggg aatgatgatg 3241 caaatggggg cgcctctgtt caatcagcca cctccacgag ctggactgct gggaatgcca 3301 cccaatggag gaaaccaggg tggaggacca ggacctgtgc ccaatggcaa tccctttaat 3361 ccctttgcgg gcggagcggg caacaatgga ggaggcggcg gaggaggagg aaacaacatg 3421 ggcaacatgg gcatgccctt caagaatttc aacaacggaa ataacaacaa caataacaac 3481 aatgggggcg gcagaggtgg acactttcca ggtggaggag gaggaggaaa caatcgcaat 3541 cagcggggga ggcggtaatc agcgagtgtc gccaggataa accaacaaca taaaagactt 3601 gttatgccaa aatgatgttg atgttatgcc ccatgaccca tgccccattt accccaagta 3661 acccggcctt gtttctcccc ccactcctat ttttttttta tagagaatcc gggcttcgac 3721 tgctttgtac attgtattct attctattcc ttaattcccc atcattgtca ctattttttt 3781 ggctaggtgt aaggacgagc ccttatagca tgtagcccta ctacgtactg ataaatgtag 3841 ttaatagtaa aacgagaaaa acagagaaac ttaagaagga aaagctgagg aacaggaaca 3901 gaaacagaaa gtcaagtaga attggtatgt gacctttttt accgagctct tttgaataac 3961 gtaggattaa actgtttatt tgtgcgtgta ctacattgat aaactagaca taccaactac 4021 aaataaataa catgttttaa gtaa